Glyma.09g132800

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Report for Sequence Feature Glyma.09g132800

Feature Type:	gene_model
Chromosome:	Gm09
Start:	33043369
stop:	33050076
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g132800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G25680.1	AT	PPPDE putative thiol peptidase family protein	JGI	N/A	IEA
KOG0324	KOG	Uncharacterized conserved protein	JGI	N/A	IEA
PTHR12378	Panther	UNCHARACTERIZED	JGI	N/A	IEA
PF05903	PFAM	PPPDE putative peptidase domain	JGI	N/A	IEA

Expression Patterns of Glyma.09g132800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g132800 not represented in the dataset	Glyma.09g132800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.09g132800

Paralog	Evidence	Comments
Glyma.16g179500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g132800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g24630	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g132800

Limit To All Plant Sequences

>Glyma.09g132800.2 sequence-type=transcript locus=Glyma.09g132800 ID=Glyma.09g132800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TACTCTTTCTCTCTCTCTGTTATGTTCCCTCCTTCTAGAATATAAATTCACGAGAGAAACACGAAAATCTTTCGATTCCGGACAGAAAAAAACTTGGGACGGTGAAATTGGAGGGTTTTCCGGGATCCCAAGGCCGAATCTTGATTCAATTTACGAAAAGAGAACACCATCCGTTGCTGAATCTTGAAGCCGAATCAAATCGTAGAGAGAGAGAGAGACACCCAGATAGGCGAATAGCGTTTAGAGAGAGAAAGGTGAAGTGGGGTTGTCTAAAGTTTGGGTCTTGTGTTTGTTGTGTGTGGTGGGTGAAAGGGAAAGATGACGGATGTGGTACTGCATATATACGATGTGACGAATAGTGGATCCGAGAAAACCAACAGCACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTTGGTGGCATCTTCCACAGCGCTGTGCAGGTCCTGTGGAGTGTGTGGTTGTAACTGGCTCGCTGCTGTGGTGTGAAAAGTGATCATACTGAAATGAAGAGAGAAATTTGAGATATGGACACTGGCTAGTAGAGGTTTTTGGAGATGATGAATGGTCATTTGGGTTCTGTGAGCAAGGTACCGGGGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCTATTTTCAAGTTAAATCAAATACTGAGAGAACTCAGTAGAGAGTGGCCTGGGAGTTCATATGATCTGCTGTCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGACTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCTAAAACTGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGAGTTACCAATAATGTTACTAATAATGTTAAAAATGGTCCTGAGACCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGGCTTCAAGGTTCTTGGTTGAAAAATATTATTACTAATGGTGCAAAACCGTCTACTAGTTCAGAAGCCGAGAATCAGAACGGAGTTATGCCCCTACCGCCAACACGAGAAGATGATCAAGCATTGCTACATAGCTCATCTTAGTTATGCAATGTATTGTAATTTTAAGTCAGAAAAAGTATAACGGAATTTTACATGCTATTCATGTGTATCAAATGTAAAATTTTTCGTTTGTTCAACTCAAATCTTATTGGTGCCTCGTAAGACTATGTTCTTTGAAAGGTACTTTTACTGTTTTTCTCTTTTTCCTATCTGACTTGGCAAACTATATTCACGCAGTCACAATTCCAAATTTTGATGAGTTTGAATTTATAAAGTGGATTTGATGTATTTTGATTTTAGTTAAAATATATATTTTTTATCCTCGT

>Glyma.09g132800.3 sequence-type=transcript locus=Glyma.09g132800 ID=Glyma.09g132800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATATGACTCTTCTCATTGTTGATCTGATTATATGTTAATTTGGCATTCCCAGTCTCAGATAGCAAAAGGAACCTATCTTTTGTTTTTACTGGCTTCTACATAGTAAATATGGTGATGAAGTCTGTTTGTTTATTTATTTTTTCTCAAGGGAGGGTATCAATATTTGCATCTTCGTTGATATTGTGGTTCTGCTTAAACAGAAACTGTCACCTTCATGATATTACTTTTTTGTTGTTTATCTGGTCATATAGTATGCTTGCATCTTTTAGGTCATTTTTTTTTTTCATTTACTCACTTCTGCTTCCTTGACATATGGTAGGCCTGCTGTTTTATCTTGTGCTGACATATTTAAGATTGTTTTGCCATTACAGGTTTTTGGAGATGATGAATGGTCATTTGGGTTCTGTGAGCAAGGTACCGGGGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCTATTTTCAAGTTAAATCAAATACTGAGAGAACTCAGTAGAGAGTGGCCTGGGAGTTCATATGATCTGCTGTCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGACTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCTAAAACTGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGAGTTACCAATAATGTTACTAATAATGTTAAAAATGGTCCTGAGACCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGGCTTCAAGGTTCTTGGTTGAAAAATATTATTACTAATGGTGCAAAACCGTCTACTAGTTCAGAAGCCGAGAATCAGAACGGAGTTATGCCCCTACCGCCAACACGAGAAGATGATCAAGCATTGCTACATAGCTCATCTTAGTTATGCAATGTATTGTAATTTTAAGTCAGAAAAAGTATAACGGAATTTTACATGCTATTCATGTGTATCAAATGTAAAATTTTTCGTTTGTTCAACTCAAATCTTATTGGTGCCTCGTAAGACTATGTTCTTTGAAAGGTACTTTTACTGTTTTTCTCTTTTTCCTATCTGACTTGGCAAACTATATTCACGCAGTCACAATTCCAAATTTTGATGAGTTTGAATTTATAAAGTGGATTTGATGTATTTTGATTTTAGTTAAAATATATATTTTTTATCCTCGT

Coding sequences of Glyma.09g132800

Limit To All Plant Sequences

>Glyma.09g132800.1 sequence-type=CDS polypeptide=Glyma.09g132800.1.p locus=Glyma.09g132800 ID=Glyma.09g132800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGGATGTGGTACTGCATATATACGATGTGACGAATAGTGGATCCGAGAAAACCAACAGCACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTTGGTGGCATCTTCCACAGCGCTGTGCAGGTTTTTGGAGATGATGAATGGTCATTTGGGTTCTGTGAGCAAGGTACCGGGGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCTATTTTCAAGTTAAATCAAATACTGAGAGAACTCAGTAGAGAGTGGCCTGGGAGTTCATATGATCTGCTGTCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGACTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCTAAAACTGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGAGTTACCAATAATGTTACTAATAATGTTAAAAATGGTCCTGAGACCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGGCTTCAAGGTTCTTGGTTGAAAAATATTATTACTAATGGTGCAAAACCGTCTACTAGTTCAGAAGCCGAGAATCAGAACGGAGTTATGCCCCTACCGCCAACACGAGAAGATGATCAAGCATTGCTACATAGCTCATCTTAG

>Glyma.09g132800.2 sequence-type=CDS polypeptide=Glyma.09g132800.2.p locus=Glyma.09g132800 ID=Glyma.09g132800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATACATATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCTATTTTCAAGTTAAATCAAATACTGAGAGAACTCAGTAGAGAGTGGCCTGGGAGTTCATATGATCTGCTGTCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGACTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCTAAAACTGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGAGTTACCAATAATGTTACTAATAATGTTAAAAATGGTCCTGAGACCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGGCTTCAAGGTTCTTGGTTGAAAAATATTATTACTAATGGTGCAAAACCGTCTACTAGTTCAGAAGCCGAGAATCAGAACGGAGTTATGCCCCTACCGCCAACACGAGAAGATGATCAAGCATTGCTACATAGCTCATCTTAG

>Glyma.09g132800.3 sequence-type=CDS polypeptide=Glyma.09g132800.3.p locus=Glyma.09g132800 ID=Glyma.09g132800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATACATATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCTATTTTCAAGTTAAATCAAATACTGAGAGAACTCAGTAGAGAGTGGCCTGGGAGTTCATATGATCTGCTGTCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGACTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCTAAAACTGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGAGTTACCAATAATGTTACTAATAATGTTAAAAATGGTCCTGAGACCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGGCTTCAAGGTTCTTGGTTGAAAAATATTATTACTAATGGTGCAAAACCGTCTACTAGTTCAGAAGCCGAGAATCAGAACGGAGTTATGCCCCTACCGCCAACACGAGAAGATGATCAAGCATTGCTACATAGCTCATCTTAG

Predicted protein sequences of Glyma.09g132800

Limit To All Plant Sequences

>Glyma.09g132800.1.p sequence-type=predicted peptide transcript=Glyma.09g132800.1 locus=Glyma.09g132800 ID=Glyma.09g132800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTDVVLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVFGDDEWSFGFCEQGTGVFSCPSGKNPMYTYRESIVLGKTNFSIFKLNQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPETPNNSNRGGSPRLQGSWLKNIITNGAKPSTSSEAENQNGVMPLPPTREDDQALLHSSS*

>Glyma.09g132800.2.p sequence-type=predicted peptide transcript=Glyma.09g132800.2 locus=Glyma.09g132800 ID=Glyma.09g132800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYTYRESIVLGKTNFSIFKLNQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPETPNNSNRGGSPRLQGSWLKNIITNGAKPSTSSEAENQNGVMPLPPTREDDQALLHSSS*

>Glyma.09g132800.3.p sequence-type=predicted peptide transcript=Glyma.09g132800.3 locus=Glyma.09g132800 ID=Glyma.09g132800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYTYRESIVLGKTNFSIFKLNQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPETPNNSNRGGSPRLQGSWLKNIITNGAKPSTSSEAENQNGVMPLPPTREDDQALLHSSS*

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