SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g116200

Feature Type:gene_model
Chromosome:Gm09
Start:27567196
stop:27572530
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g116200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25750.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR11102PantherFam SEL-1-LIKE PROTEIN JGI N/AIEA
PF00646Pfam F-box domain JGI N/AIEA
PF03478Pfam Protein of unknown function (DUF295) JGI N/AIEA

Gene model name correspondences to Glyma.09g116200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g19520 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g116200
>Glyma.09g116200.1 sequence-type=CDS polypeptide=Glyma.09g116200.1.p locus=Glyma.09g116200 id=Glyma.09g116200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATTCATTACTGTGGGAAGCTATCATCACAAAAATTGTTGCCAAAAGGATGAAAAGAAGAAATAAAAAAAGAAACTTGAGAAAGAAATACTATGAGGATTGGTCAAGTATCCCTTCATTGCCGTTGAAAGCAGTCAGGAGAAGATTTAGTGTCAAATGTAGAAAAAAAATACACAGAAGAAAAAAAGAATTGAAAAAGAAAAACTTTGCAGATTGGTCTAGTCTCCCTCGAGGTATACTTGAGATGGTTGCTGAAAGACTGACCTTTATCGATTGCTTATCAATCAGCAAAGTTTGTACAAGTTGGAATAGAGTTCTTGGTGAAGAACTTCCTAGGTGGCAAAGGCATGGATTTCCTTGGCTCTTGGTGTCAGATCAGCAGAACAAAGAGATTAGAACTTGTATCAGTATATTGGAGAATCGTGTTTGGGAGTTGGAGTTATCAGAGGCATATGGAAAGTATTGTTGGGGATCATTTTGTGATTGGTTAATTATGGTAAAAAAAATTGACAATTTCCATCTTGAAGTTAACTTGTTGAATCCATTTTCAGGACGCCAAATTAGTCTCCCTTTAATATGGAACTTTTACCACAAGATGGTGCATTCAGGGCTTCCCTCTGAGAATAACTTTATTTGCATGCTTCTACACAGCCAGTACTGTGAGCTGGCTTTTTGGGTCCCAGGAGCAAATTCATGGCGTAAACATAAACTAACGGGTGAGCCATTTGAGGATGCTGTATTTTGTAATGGAAGCTTTTACCTCCTGGCTGATGGATTTAATATATGGCAAATTGATGTTCGAAGTATCTACTCTAGCATTAGCAAAGGTGATGATGATTTTGGAACACAGTCCAAGATAGAAACACAGTTTCTTGAAGTACAAAGGCCTGAGATATTACAAGAAGGGATTATATTACACAATCATCATGACTATCAAATTTTAAGATATCTTGTGGAGTCTTGTGGGGAGCTTTTGCTTGTTTGTAGATATTTTAGTACCAAACAAGATGCGGTGCTTGAGACCCTAAAATTCGAGGTATATTCATTGGACTTTTGTCAATTATCTTGGAAGAAGGTTGAGGATTTGGGGGATCAAATGATATTTTTGGGGAAATGTTCCTCAACATCCTTCTCTGCAATGGAACTTGGAGCTGGAATTAGAAACAGCATTTTTTTCTGCAATGATCCAATTGTTCCTTGGTGGAATGAATGGGATTCTGATCATTTAAAAGGTATATTAACCCGTTTTGGCGCCAATAGGACTGACGTAAGCAATTGGGGCATTTTCAGGCTTGGCAATGAGGATGGCGAGCCGTTTTGCTTCCATGGTGATATAGACCATTGGACATACACCTGGTTTACTGCACCTTCATGGTGGTGTTATAGAAATATTCCTCCAGAAGGAAGCAGTTAA

>Glyma.09g116200.3 sequence-type=CDS polypeptide=Glyma.09g116200.3.p locus=Glyma.09g116200 id=Glyma.09g116200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATTCATTACTGTGGGAAGCTATCATCACAAAAATTGTTGCCAAAAGGATGAAAAGAAGAAATAAAAAAAGAAACTTGAGAAAGAAATACTATGAGGATTGGTCAAGTATCCCTTCATTGCCGTTGAAAGCAGTCAGGAGAAGATTTAGTGTCAAATGTAGAAAAAAAATACACAGAAGAAAAAAAGAATTGAAAAAGAAAAACTTTGCAGATTGGTCTAGTCTCCCTCGAGGTATACTTGAGATGGTTGCTGAAAGACTGACCTTTATCGATTGCTTATCAATCAGCAAAGTTTGTACAAGTTGGAATAGAGTTCTTGGTGAAGAACTTCCTAGGTGGCAAAGGCATGGATTTCCTTGGCTCTTGGTGTCAGATCAGCAGAACAAAGAGATTAGAACTTGTATCAGTATATTGGAGAATCGTGTTTGGGAGTTGGAGTTATCAGAGGCATATGGAAAGTATTGTTGGGGATCATTTTGTGATTGGTTAATTATGGTAAAAAAAATTGACAATTTCCATCTTGAAGTTAACTTGTTGAATCCATTTTCAGGACGCCAAATTAGTCTCCCTTTAATATGGAACTTTTACCACAAGATGGTGCATTCAGGGCTTCCCTCTGAGAATAACTTTATTTGCATGCTTCTACACAGCCAGTACTGTGAGCTGGCTTTTTGGGTCCCAGGAGCAAATTCATGGCGTAAACATAAACTAACGGGTGAGCCATTTGAGGATGCTGTATTTTGTAATGGAAGCTTTTACCTCCTGGCTGATGGATTTAATATATGGCAAATTGATGTTCGAAGTATCTACTCTAGCATTAGCAAAGGTGATGATGATTTTGGAACACAGTCCAAGATAGAAACACAGTTTCTTGAAGTACAAAGGCCTGAGATATTACAAGAAGGGATTATATTACACAATCATCATGACTATCAAATTTTAAGATATCTTGTGGAGTCTTGTGGGGAGCTTTTGCTTGTTTGTAGATATTTTAGTACCAAACAAGATGCGGTGCTTGAGACCCTAAAATTCGAGGTATATTCATTGGACTTTTGTCAATTATCTTGGAAGAAGGTTGAGGATTTGGGGGATCAAATGATATTTTTGGGGAAATGTTCCTCAACATCCTTCTCTGCAATGGAACTTGGAGCTGGAATTAGAAACAGCATTTTTTTCTGCAATGATCCAATTGTTCCTTGGTGGAATGAATGGGATTCTGATCATTTAAAAGGTATATTAACCCGTTTTGGCGCCAATAGGACTGACGTAAGCAATTGGGGCATTTTCAGGCTTGGCAATGAGGATGGCGAGCCGTTTTGCTTCCATGGTGATATAGACCATTGGACATACACCTGGTTTACTGCACCTTCATGGTGGTGTTATAGAAATATTCCTCCAGAAGGAAGCAGTTAA
Predicted protein sequences of Glyma.09g116200
>Glyma.09g116200.1.p sequence-type=predicted peptide transcript=Glyma.09g116200.1 locus=Glyma.09g116200 id=Glyma.09g116200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHSLLWEAIITKIVAKRMKRRNKKRNLRKKYYEDWSSIPSLPLKAVRRRFSVKCRKKIHRRKKELKKKNFADWSSLPRGILEMVAERLTFIDCLSISKVCTSWNRVLGEELPRWQRHGFPWLLVSDQQNKEIRTCISILENRVWELELSEAYGKYCWGSFCDWLIMVKKIDNFHLEVNLLNPFSGRQISLPLIWNFYHKMVHSGLPSENNFICMLLHSQYCELAFWVPGANSWRKHKLTGEPFEDAVFCNGSFYLLADGFNIWQIDVRSIYSSISKGDDDFGTQSKIETQFLEVQRPEILQEGIILHNHHDYQILRYLVESCGELLLVCRYFSTKQDAVLETLKFEVYSLDFCQLSWKKVEDLGDQMIFLGKCSSTSFSAMELGAGIRNSIFFCNDPIVPWWNEWDSDHLKGILTRFGANRTDVSNWGIFRLGNEDGEPFCFHGDIDHWTYTWFTAPSWWCYRNIPPEGSS*

>Glyma.09g116200.3.p sequence-type=predicted peptide transcript=Glyma.09g116200.3 locus=Glyma.09g116200 id=Glyma.09g116200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHSLLWEAIITKIVAKRMKRRNKKRNLRKKYYEDWSSIPSLPLKAVRRRFSVKCRKKIHRRKKELKKKNFADWSSLPRGILEMVAERLTFIDCLSISKVCTSWNRVLGEELPRWQRHGFPWLLVSDQQNKEIRTCISILENRVWELELSEAYGKYCWGSFCDWLIMVKKIDNFHLEVNLLNPFSGRQISLPLIWNFYHKMVHSGLPSENNFICMLLHSQYCELAFWVPGANSWRKHKLTGEPFEDAVFCNGSFYLLADGFNIWQIDVRSIYSSISKGDDDFGTQSKIETQFLEVQRPEILQEGIILHNHHDYQILRYLVESCGELLLVCRYFSTKQDAVLETLKFEVYSLDFCQLSWKKVEDLGDQMIFLGKCSSTSFSAMELGAGIRNSIFFCNDPIVPWWNEWDSDHLKGILTRFGANRTDVSNWGIFRLGNEDGEPFCFHGDIDHWTYTWFTAPSWWCYRNIPPEGSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo