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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G12050.1 | AT | Aha1 domain-containing protein | JGI | N/A | IEA |
GO:0006950 | GO-bp | response to stress | EnsemblGenomes | N/A | IEA |
GO:0006950 | GO-bp | response to stress | JGI | N/A | IEA |
GO:0032781 | GO-bp | positive regulation of ATPase activity | EnsemblGenomes | N/A | IEA |
GO:0001671 | GO-mf | ATPase activator activity | EnsemblGenomes | N/A | IEA |
GO:0001671 | GO-mf | ATPase activator activity | JGI | N/A | IEA |
GO:0051087 | GO-mf | chaperone binding | EnsemblGenomes | N/A | IEA |
GO:0051087 | GO-mf | chaperone binding | JGI | N/A | IEA |
KOG2936 | KOG | Uncharacterized conserved protein | JGI | N/A | IEA |
PTHR13009 | Panther | HEAT SHOCK PROTEIN 90 (HSP90) CO-CHAPERONE AHA-1 | JGI | N/A | IEA |
PF08327 | PFAM | Activator of Hsp90 ATPase homolog 1-like protein | JGI | N/A | IEA |
PF09229 | PFAM | Activator of Hsp90 ATPase, N-terminal | JGI | N/A | IEA |
Glyma.09g109200 not represented in the dataset |
Glyma.09g109200 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.02g171100 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma09g16673 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.09g109200.2 sequence-type=transcript locus=Glyma.09g109200 ID=Glyma.09g109200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 GAAAACGGTGAAATTGGGAATAAACTGAAGGAGGTGATGTCGAAGAAGGGGAGGGTGGTGGTTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCCGTGAAGGACGAGCTCGAAGCGAAGAAGGTTGCGGTACCTCACAACAAAAACAACACTAGTAGTAGTAATGGTGATAACAATGATTTGAAGAAGGAAGAGGTTAACAAGAGTGAGGGGAAGAAGGGGTTTAAGTTGATTAGTTTGACTGAGAAGTTTAATTGTAGGGCGAGGGATTTGTTTGAGATTCTGATGGATGAGAATAGGTGGAGGGGTTTTACGCAGAGCAATGCGAGGATTAGTAAGGAGGTTGGAGGAGAGTTTAGTATTTTCGACGGGTCGGTGACGGGGAAGAATTTGGAGTTGGAGGAAGGGATGTTGATTGTGCAGAGATGGAGGTTTGGGAGCTGGCCTGATGGGATTGAATCCATGGTGAGGATTATGTTTGAGGAGCCTGAAGATGGAGTCACTGTTGTTAAGCTCACACATAGTGATGTCCCTGAAGAAGACAGATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGTTGGCGGGATCTCATTTTCCAAAGGATACGAACTGCGTTTGGTTTTGGAATTTGAGATTTTCCAAATATTATTTATGTTGTAGAATTTTTCATTTTCTTTTCAAGAGATTTTGTTTTTTTTTTTTCAGCAAGAAAAGATTATTGGATTGGCAATTTCCCACGAAAGACGAAGTGTCTTTTGCAATGATTTCGCAAATTGACTCTTGCTCAATTGAATGGTCTTGCTGGCTGTATCTCTTGTTAGAAATGTGAGCTGTCATCATTCATCAATGTGATCTCATTGTTCATCTCATTAAACTTTTGTTATACAATGAAAGGGTTACAAATTCAGTTGGAGCTAAATTGCTCCCATTTACCATCTTTACTAAATGAAGACTTGCGAATTTCCAGCTGCATGTGTTAATTCCTACTTAATTTCCAGCTGCATAGTGCTTTTAGTTATGTTGAAATTGGATATATTCAAATGGGTCTTGGAGTAATTGCCATGAACCTCAGACTTCTTCAACCTTCATGTGTTGTATTGTGAGTGTTCTTGCTTAATCATATGATTAGAACCCAACTCATTGGTTGGGAACCTAGGCTTGATCTGACATCTGAATTATATGATTGATTTGG
>Glyma.09g109200.1 sequence-type=CDS polypeptide=Glyma.09g109200.1.p locus=Glyma.09g109200 ID=Glyma.09g109200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCGAAGTTTGGCGAGGGCGACAAGCGGTGGATCGTGGCGGAGCGTCCCGACGGCACTAACGTGCACAACTGGCACTGGGCGGAGACCAACTGCCTCGAGTGGTCCAGAACCTTCTTCAAGAACAATTTCAGTAACGTCGCCGTCGGTGGCGGCGACGGCGATGCCACCATCACGATCAAGAAGGTGGAGAAGCTCGATGGCGAGGCCTACGTGAACGTCCGCAAGGGGAAGGTGATCCCCGGGTACGAGATCAGCGTGAGGCTCGCGTGGGAGGGCGAGGCGCGGGACGCCAACGGGAAGGTTCTGCAGAGAAAGGAAGAGGTTAACAAGAGTGAGGGGAAGAAGGGGTTTAAGTTGATTAGTTTGACTGAGAAGTTTAATTGTAGGGCGAGGGATTTGTTTGAGATTCTGATGGATGAGAATAGGTGGAGGGGTTTTACGCAGAGCAATGCGAGGATTAGTAAGGAGGTTGGAGGAGAGTTTAGTATTTTCGACGGGTCGGTGACGGGGAAGAATTTGGAGTTGGAGGAAGGGATGTTGATTGTGCAGAGATGGAGGTTTGGGAGCTGGCCTGATGGGATTGAATCCATGGTGAGGATTATGTTTGAGGAGCCTGAAGATGGAGTCACTGTTGTTAAGCTCACACATAGTGATGTCCCTGAAGAAGACAGATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGTTGGCGGGATCTCATTTTCCAAAGGATACGAACTGCGTTTGCAAGAAAAGATTATTGGATTGGCAATTTCCCACGAAAGACGAAGTGTCTTTTGCAATGA >Glyma.09g109200.2 sequence-type=CDS polypeptide=Glyma.09g109200.2.p locus=Glyma.09g109200 ID=Glyma.09g109200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCGAAGAAGGGGAGGGTGGTGGTTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCCGTGAAGGACGAGCTCGAAGCGAAGAAGGTTGCGGTACCTCACAACAAAAACAACACTAGTAGTAGTAATGGTGATAACAATGATTTGAAGAAGGAAGAGGTTAACAAGAGTGAGGGGAAGAAGGGGTTTAAGTTGATTAGTTTGACTGAGAAGTTTAATTGTAGGGCGAGGGATTTGTTTGAGATTCTGATGGATGAGAATAGGTGGAGGGGTTTTACGCAGAGCAATGCGAGGATTAGTAAGGAGGTTGGAGGAGAGTTTAGTATTTTCGACGGGTCGGTGACGGGGAAGAATTTGGAGTTGGAGGAAGGGATGTTGATTGTGCAGAGATGGAGGTTTGGGAGCTGGCCTGATGGGATTGAATCCATGGTGAGGATTATGTTTGAGGAGCCTGAAGATGGAGTCACTGTTGTTAAGCTCACACATAGTGATGTCCCTGAAGAAGACAGATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGTTGGCGGGATCTCATTTTCCAAAGGATACGAACTGCGTTTGGTTTTGGAATTTGA
>Glyma.09g109200.1.p sequence-type=predicted peptide transcript=Glyma.09g109200.1 locus=Glyma.09g109200 ID=Glyma.09g109200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAKFGEGDKRWIVAERPDGTNVHNWHWAETNCLEWSRTFFKNNFSNVAVGGGDGDATITIKKVEKLDGEAYVNVRKGKVIPGYEISVRLAWEGEARDANGKVLQRKEEVNKSEGKKGFKLISLTEKFNCRARDLFEILMDENRWRGFTQSNARISKEVGGEFSIFDGSVTGKNLELEEGMLIVQRWRFGSWPDGIESMVRIMFEEPEDGVTVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRTAFARKDYWIGNFPRKTKCLLQ* >Glyma.09g109200.2.p sequence-type=predicted peptide transcript=Glyma.09g109200.2 locus=Glyma.09g109200 ID=Glyma.09g109200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSKKGRVVVLEKVRVWVESMAKGGPVKDELEAKKVAVPHNKNNTSSSNGDNNDLKKEEVNKSEGKKGFKLISLTEKFNCRARDLFEILMDENRWRGFTQSNARISKEVGGEFSIFDGSVTGKNLELEEGMLIVQRWRFGSWPDGIESMVRIMFEEPEDGVTVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRTAFGFGI*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||