SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g105600

Feature Type:gene_model
Chromosome:Gm09
Start:19231238
stop:19240004
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g105600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G58580.1AT JGI N/AIEA
3.1.13.4EC poly(A)-specific ribonuclease JGI N/AIEA
K12603KEGG Messenger RNA biogenesis JGI N/AIEA
KOG0620 KOG Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins JGI N/AIEA
PTHR12121PantherFam CARBON CATABOLITE REPRESSOR PROTEIN 4 JGI N/AIEA
PTHR12121:SF34PantherFam POLY(A)-SPECIFIC RIBONUCLEASE JGI N/AIEA
PF03372Pfam Endonuclease/Exonuclease/phosphatase family JGI N/AIEA
PF15801Pfam zf-MYND-like zinc finger, mRNA-binding JGI N/AIEA

Gene model name correspondences to Glyma.09g105600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g15980 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g105600
>Glyma.09g105600.1 sequence-type=CDS polypeptide=Glyma.09g105600.1.p locus=Glyma.09g105600 id=Glyma.09g105600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTGAGCGTGGTGCGCGTGCACCTGCCCTCGGAAATTCCCATTGTAGGCTGCGAGCTCACGCCGTACGTCCTCCTCCGCCGCCCCGACAAGACCGTTTCCACCGACGATGTTCCCGAAACCGCTCCCTTAGACGGCCATTTCTTGCGCTACAAATGGTATCGTGTACAGAGTGATAAAAAAGTTGCTGTATGTAGCATACATCCATCAGAGCAAGCCACCCTGCAATGCCTAGGCTGTGTTAAGGCCAAAATACCTGTTTCCAAGAGTTACCATTGCACCACAAAGTGTTTTTCGGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCCGCAAGTGCTCTTAATGAAAATGGAAACGAGGAGGAGGAGGTATTTGGGCGCTTTAATAGTACTGGGTCTGGGGCAACCAATTCCAGTTTATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGGTCTGCAACACCTTTGTATCCAGCAGCTATCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGAAGATCTAAGACTTACACCCCTACTGCTGATGACATTGGCCATGTCCTTAAGTTTGAGTGTGTTGCAGTTGATGCAGAGACAAAACTGCCTGTGGGGCATGTCAACACTATACTAACTTCACGTGTCATTCCAGCTCCCTCGCCTATTCCTCGCCGACTGATACCTGTTGATGGGATGGCGCATTTAGATGTGGATGGGAGAATGACATCTTCAGGAACTTTTACTGTCCTATCATACAATGTATTGTCTGAAGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGTTACGGGAAATTATTGGTTATCGCCCAGACATTATTTGTCTTCAGGAGGTTCAAAGCGATCATTATGACGAATTCTTTTCTCCTGAACTAGACAAACATGGATATCATGGTCTTTACAAGAGAAAAACAAATGAGGTGTACAGTGGCAACACAAATACAATTGATGGGTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTTAAGAAATACGAGGTTGAATTTAACAAGGCTGCACAGTCTTTGACGGAGGCTACAATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCATTTGATAATGCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTCTCCCAAGATCTAAAGGATGTGAAACTCTGGCAGGTTCATACTCTCTTAAAAGGTTTGGAAAAAATAGCTGCAAGTGCAGACATTCCGATGTTGGTTTGTGGAGATTTTAATTCAGTTCCGGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCGCTTAACATTCTACGTCCTCACAGCAAGTTGGTTCATCAGTTACCACTGGTTAGTGCATACACATCTTTTGCAAGAACAGTTGGCCTTGGATATGAGCAGCATAAAAGGAGACTGGATGGTGGAACGAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTGGAGTTGCTGGATGAGGAGAGTTTGAGGAAGGACACAGCACTTCCTTCACCTGAATGGTCCTCAGATCACATTGCTCTCTTAGCTGAGTTTCGCTGCTGCAAGAATAAATCTAGGCGTTGA
Predicted protein sequences of Glyma.09g105600
>Glyma.09g105600.1.p sequence-type=predicted peptide transcript=Glyma.09g105600.1 locus=Glyma.09g105600 id=Glyma.09g105600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSVVRVHLPSEIPIVGCELTPYVLLRRPDKTVSTDDVPETAPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSGATNSSLSASASSASLTNGSATPLYPAAITQRSGETWFEVGRSKTYTPTADDIGHVLKFECVAVDAETKLPVGHVNTILTSRVIPAPSPIPRRLIPVDGMAHLDVDGRMTSSGTFTVLSYNVLSEAYASNDLYNYCPSWALSWPYRRQNLLREIIGYRPDIICLQEVQSDHYDEFFSPELDKHGYHGLYKRKTNEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPFDNAGKRQLLCVANTHVNVSQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYTSFARTVGLGYEQHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo