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Report for Sequence Feature Glyma.09g097400

Feature Type:gene_model
Chromosome:Gm09
Start:15544618
stop:15548130
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g097400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G34890.1AT xanthine dehydrogenase 1 JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
PTHR11908Panther XANTHINE DEHYDROGENASE JGI N/AIEA
PTHR11908:SF8Panther JGI N/AIEA
PF02738PFAM Molybdopterin-binding domain of aldehyde dehydrogenase JGI N/AIEA
P165-PWYSoyCyc9 superpathway of purines degradation in plants Plant Metabolic Network ISS
PWY-5044SoyCyc9 purine nucleotides degradation I (plants) Plant Metabolic Network ISS
PWY-5695SoyCyc9 inosine 5'-phosphate degradation Plant Metabolic Network ISS
PWY-6595SoyCyc9 superpathway of guanosine nucleotides degradation (plants) Plant Metabolic Network ISS
PWY-6596SoyCyc9 adenosine nucleotides degradation I Plant Metabolic Network ISS
PWY-6606SoyCyc9 guanosine nucleotides degradation II Plant Metabolic Network ISS
PWY-6607SoyCyc9 guanosine nucleotides degradation I Plant Metabolic Network ISS
URSIN-PWYSoyCyc9 ureide biosynthesis Plant Metabolic Network ISS
GN7V-67841SoyCyc9-rxn xanthine:NAD+ oxidoreductase Plant Metabolic Network ISS

Expression Patterns of Glyma.09g097400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g097400 not represented in the dataset
Glyma.09g097400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.09g097400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g13521 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.09g097400
>Glyma.09g097400.2 sequence-type=transcript locus=Glyma.09g097400 ID=Glyma.09g097400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCATTTCTTTCACGCAAACACCACACTCACTGTAACTTCCTTGTTCACGATTCCATTGTTCATGTGGAGGCACGACGGAGGGCGACGGACGCGGTCTTTTCTGGTGCGATCTTTCCCTCACTCCTGAGTCTTCTCTCTCCTTTTTCTGATACGGTCTTTTCTGGCACGGTCTCTCTACAGTCTTCACTCTCCCTTTCATGGTATTGTCCGAGGCGGTTTCACTTCTCTCACCATTTTTTGACGAGGTCACCACTGTTTCTGCATATTTCGGTGAGGGTTAAGGTTCATCGTGCCTTACTCATCGCAGATGTAGGGTTTATCGCGCCTCACTCATTGTGATATCTTGGAAGGGATACTTAAGGCTGTTATTAAGCTTCATCATCGCCAATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAGCAAATGGATATTTATTATTTACTTAAATGGCTAGTATACCTCACAGTCTCACACCTGATAAAATGACCTAAAAAATGATACTTTCAACTTCAAAAAAGATAGCTCAGCTTCCTTCATGTATATGCATATCTTCTCTCTATACAATTTAACATTTCTCATCTCAATGAA

>Glyma.09g097400.3 sequence-type=transcript locus=Glyma.09g097400 ID=Glyma.09g097400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCATTTCTTTCACGCAAACACCACACTCACTGTAACTTCCTTGTTCACGATTCCATTGTTCATGTGGAGGCACGACGGAGGGCGACGGACGCGGTCTTTTCTGTCTTCACTCTCCCTTTCATGGTATTGTCCGAGGCGGTTTCACTTCTCTCACCATTTTTTGACGAGGTCACCACTGTTTCTGCATATTTCGGTGAGGGTTAAGGTTCATCGTGCCTTACTCATCGCAGATGTAGGGTTTATCGCGCCTCACTCATTGTGATATCTTGGAAGGGATACTTAAGGCTGTTATTAAGCTTCATCATCGCCAATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAGCAAATGGATATTTATTATTTACTTAAATGGCTAGTATACCTCACAGTCTCACACCTGATAAAATGACCTAAAAAATGATACTTTCAACTTCAAAAAAGATAGCTCAGCTTCCTTCATGTATATGCATATCTTCTCTCTATACAATTTAACATTTCTCATCTCAATGAA

>Glyma.09g097400.4 sequence-type=transcript locus=Glyma.09g097400 ID=Glyma.09g097400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCATTTCTTTCACGCAAACACCACACTCACTGTAACTTCCTTGTTCACGATTCCATTGTTCATGTGGAGGCACGACGGAGGGCGACGGACGCGGTCTTTTCTGGTGCGATCTTTCCCTCACTCCTGAGTCTTCTCTCTCCTTTTTCTGATACGGTCTTTTCTGGCACGGTCTCTCTACAGTCTTCACTCTCCCTTTCATGGTATTGTCCGAGGCGGTTTCACTTCTCTCACCATTTTTTGACGAGGTCACCACTGTTTCTGCATATTTCGGTGAGGTTCATCGTGCCTTACTCATCGCAGATGTAGGGTTTATCGCGCCTCACTCATTGTGGTTTGTTATCCACTCATCGGTTTTAATTCTCAATCTATATCTTGGAAGGGATACTTAAGGCTGTTATTAAGCTTCATCATCGCCAATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAGCAAATGGATATTTATTATTTACTTAAATGGCTAGTATACCTCACAGTCTCACACCTGATAAAATGACCTAAAAAATGATACTTTCAACTTCAAAAAAGATAGCTCAGCTTCCTTCATGTATATGCATATCTTCTCTCTATACAATTTAACATTTCTCATCTCAATGAA
Coding sequences of Glyma.09g097400
>Glyma.09g097400.1 sequence-type=CDS polypeptide=Glyma.09g097400.1.p locus=Glyma.09g097400 ID=Glyma.09g097400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAG

>Glyma.09g097400.2 sequence-type=CDS polypeptide=Glyma.09g097400.2.p locus=Glyma.09g097400 ID=Glyma.09g097400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAG

>Glyma.09g097400.3 sequence-type=CDS polypeptide=Glyma.09g097400.3.p locus=Glyma.09g097400 ID=Glyma.09g097400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAG

>Glyma.09g097400.4 sequence-type=CDS polypeptide=Glyma.09g097400.4.p locus=Glyma.09g097400 ID=Glyma.09g097400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGATGGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTTCAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAG
Predicted protein sequences of Glyma.09g097400
>Glyma.09g097400.1.p sequence-type=predicted peptide transcript=Glyma.09g097400.1 locus=Glyma.09g097400 ID=Glyma.09g097400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVCTKLLAGALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPLCSMKEVLINLFKVFIPNQDHTSSPIKTYMG*

>Glyma.09g097400.2.p sequence-type=predicted peptide transcript=Glyma.09g097400.2 locus=Glyma.09g097400 ID=Glyma.09g097400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVCTKLLAGALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPLCSMKEVLINLFKVFIPNQDHTSSPIKTYMG*

>Glyma.09g097400.3.p sequence-type=predicted peptide transcript=Glyma.09g097400.3 locus=Glyma.09g097400 ID=Glyma.09g097400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVCTKLLAGALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPLCSMKEVLINLFKVFIPNQDHTSSPIKTYMG*

>Glyma.09g097400.4.p sequence-type=predicted peptide transcript=Glyma.09g097400.4 locus=Glyma.09g097400 ID=Glyma.09g097400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVCTKLLAGALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPLCSMKEVLINLFKVFIPNQDHTSSPIKTYMG*






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