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Report for Sequence Feature Glyma.09g071300

Feature Type:gene_model
Chromosome:Gm09
Start:7288604
stop:7290486
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g071300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20930.1AT cyclin-dependent kinase B2;2 JGI N/AIEA
GO:0000082GO-bp G1/S transition of mitotic cell cycle EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0007165GO-bp signal transduction EnsemblGenomesN/AIEA
GO:0007275GO-bp multicellular organism development EnsemblGenomesN/AIEA
GO:0008284GO-bp positive regulation of cell proliferation EnsemblGenomesN/AIEA
GO:0010033GO-bp response to organic substance EnsemblGenomesN/AIEA
GO:0010389GO-bp regulation of G2/M transition of mitotic cell cycle EnsemblGenomesN/AIEA
GO:0010468GO-bp regulation of gene expression EnsemblGenomesN/AIEA
GO:0000307GO-cc cyclin-dependent protein kinase holoenzyme complex EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0004674GO-mf protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0004693GO-mf cyclin-dependent protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0030332GO-mf cyclin binding EnsemblGenomesN/AIEA
KOG0594 KOG Protein kinase PCTAIRE and related kinases JGI N/AIEA
PTHR24056Panther CELL DIVISION PROTEIN KINASE JGI N/AIEA
PTHR24056:SF101Panther JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA

Expression Patterns of Glyma.09g071300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g071300 not represented in the dataset
Glyma.09g071300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.09g071300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g08250 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.09g071300
>Glyma.09g071300.2 sequence-type=transcript locus=Glyma.09g071300 ID=Glyma.09g071300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGTAGTAGTAGGGGGAGCGGGATTTGAAATTCAAAAAAACAAGGAAGCCGTTGGAGATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCtgcatatattcagGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCGTAAGTTGCTGCTCTTTAACTAACTCTTTCTAGTAGTGGTTCCTGTTGATTTTTTGTTTCATTATATTTTTCTCTTCTTTTCAGCAAATGTTGGAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTCAATGACCTGGACAAGGGGCATCTTTAGAAAGACAAATTATTGATCTATGCTTCTCTTGAGCGTGTATCGTTTTAAGACAATAGACTTTTGCTGTTTAACTTTTCATATTTGTGGAATCATGGAGTGATTGATTGCCCTTGGGATTTATGGTCACTTCTGTCTTTTCTAGTCATTCTAATGAGTAATGAAAATATCAAGGTGTTTTCATGCTATTAATGAAATCCATTCCTTTTTTCTTGTGAACTCCCTTGTCTGGAAATTGCCACTATTATTCTCATTGAAATAGAGTTGTATGGTCatttaaaataagaaattcaaaattgactatgaacact
Coding sequences of Glyma.09g071300
>Glyma.09g071300.1 sequence-type=CDS polypeptide=Glyma.09g071300.1.p locus=Glyma.09g071300 ID=Glyma.09g071300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCCAAATGTTGGAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTCAATGACCTGGACAAGGGGCATCTTTAG

>Glyma.09g071300.2 sequence-type=CDS polypeptide=Glyma.09g071300.2.p locus=Glyma.09g071300 ID=Glyma.09g071300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCGTAAGTTGCTGCTCTTTAACTAACTCTTTCTAG
Predicted protein sequences of Glyma.09g071300
>Glyma.09g071300.1.p sequence-type=predicted peptide transcript=Glyma.09g071300.1 locus=Glyma.09g071300 ID=Glyma.09g071300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEMEKTGAGVAVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQSIPPQTIKSLMYQLCKGIAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSELQQLLHIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSQMLEYEPSKRISAKKAMEHAYFNDLDKGHL*

>Glyma.09g071300.2.p sequence-type=predicted peptide transcript=Glyma.09g071300.2 locus=Glyma.09g071300 ID=Glyma.09g071300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEMEKTGAGVAVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQSIPPQTIKSLMYQLCKGIAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSELQQLLHIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSVSCCSLTNSF*






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