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Report for Sequence Feature Glyma.09g070600

Feature Type:gene_model
Chromosome:Gm09
Start:7199107
stop:7212553
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g070600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35740.1AT DEAD/DEAH box RNA helicase family protein JGI N/AIEA
GO:0000724GO-bp double-strand break repair via homologous recombination EnsemblGenomesN/AIEA
GO:0006310GO-bp DNA recombination EnsemblGenomesN/AIEA
GO:0032508GO-bp DNA duplex unwinding EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005694GO-cc chromosome EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0004386GO-mf helicase activity EnsemblGenomesN/AIEA
GO:0004386GO-mf helicase activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0008026GO-mf ATP-dependent helicase activity EnsemblGenomesN/AIEA
GO:0008026GO-mf ATP-dependent helicase activity JGI N/AIEA
GO:0009378GO-mf four-way junction helicase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0036310GO-mf annealing helicase activity EnsemblGenomesN/AIEA
GO:0043138GO-mf 3'-5' DNA helicase activity EnsemblGenomesN/AIEA
GO:0043140GO-mf ATP-dependent 3'-5' DNA helicase activity EnsemblGenomesN/AIEA
KOG0351 KOG ATP-dependent DNA helicase JGI N/AIEA
PTHR13710Panther DNA HELICASE RECQ FAMILY MEMBER JGI N/AIEA
PTHR13710:SF3Panther JGI N/AIEA
PF00270PFAM DEAD/DEAH box helicase JGI N/AIEA
PF00271PFAM Helicase conserved C-terminal domain JGI N/AIEA

Expression Patterns of Glyma.09g070600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.09g070600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g08180 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g070600
>Glyma.09g070600.1 sequence-type=CDS polypeptide=Glyma.09g070600.1.p locus=Glyma.09g070600 ID=Glyma.09g070600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGTCGGCATTGCCACTGAGCGACGCGAATGCGAACAAGAAGAGGGAGGAATTGCGCCGCAAGGAAACGTTGGTGAAGCTTCTGAGATGGCATTTTGGGTACCCCGATTTCAGGGACATGCAATTGGACGCTATTCAAGCTGTGCTCTCAGGGAAAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGCATTGTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATTTCTCTCCTCAACGAAAACAACAGATGCAAAAGTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTACGAGGCTGCTATATGTGACTCCAGAGTTGATAACAACACCAGGGTTTATGACTAAGCTGACAAAGATTTATACCAGGGGGTTGCTAAATCTGATTGCGATAGATGAGGCGCATTGCATCTCATCTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTATCCTCTTTGAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGTGCCTAAGGTTCAGAAGGATGTAGTTGAATCCTTGCAGATGCAAAATCCATTAATGCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGATCTGTTGGATGATGCTTATGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAACTAATCTATCCCAAAATGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATAATAAAATGCGAACTTCGGTGTTGGATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGCCTTTGGTCTTCTTTCAGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGCTGTACTATGGGGTAGATGATCGCAAAAGAATGGAATTTATATTACGTAAATCAGTGAGCAAGAAGTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATGTCCCTGATTGCTTTCAATCTGATGGTTGAATATTGTGAAGGGTCTGGATGTCGCAGGAAAAGGGTTCTCGAGAGTTTTGGGGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGGCTGCAGACATCCAAACTTAGTTGCCCGATATTTGGAGGATCTCACAACTGCTTGTGCTCTACGCCAGAAAAATGGTTCTTCTCGAGTTTTTATGACCAGTTCCACTGATGCAATTAACGGAGAACAGTTATCTGAATTCTGGAATCAGGATGAGGAAGCTAGTGGATCAGAGGAAGATATATCTGATTCAGATGGTAATGGTAATGAGGTTGTCAACAACCTAACCCGGTCAAAGCTTCAATCCAAATTGGGAGTGAGTGAAAAGCTTGCTATGTTACAACGGGCAGAAGAAAACTTCTATCGAAATAATAATGCTTACAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGATCCAATGCGAGGATCAAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAATGGAAACATCAGCATCTTTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGTAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTGACAACTGCAAGTTCTAGCGAACTGATCAACCGACTTAGTGCAATTAATGCTTCTACCTCAATGAATGTCTTGTCTGAAGCTGAAAACCTCCTCATCCCAGCTAATCAGCCCCTCACACCAGCTGAACAGCCCCTCACATCGCCACCTGCTTTAGATCCTTATGCAAGAGATACCAGCAATGAACACTCAGGCACTGCTAGATCAGAAACTTCTGCATGTGTCTTGCCAATGGAAGGTTCTTTTAGTACCAATTTGCCACAGATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAGCAAAAGGGGACCAATTACATGACACCAAAAGGCATTCATCAAGAGTTGAAAAGAAGATGAGGATACAGTAG
Predicted protein sequences of Glyma.09g070600
>Glyma.09g070600.1.p sequence-type=predicted peptide transcript=Glyma.09g070600.1 locus=Glyma.09g070600 ID=Glyma.09g070600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKSALPLSDANANKKREELRRKETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKDLLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGLWSSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKMSLIAFNLMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAINGEQLSEFWNQDEEASGSEEDISDSDGNGNEVVNNLTRSKLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISDPMRGSSRQRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAINASTSMNVLSEAENLLIPANQPLTPAEQPLTSPPALDPYARDTSNEHSGTARSETSACVLPMEGSFSTNLPQIPSFSEFVNSRKAKGDQLHDTKRHSSRVEKKMRIQ*






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