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Report for Sequence Feature Glyma.09g070100

Feature Type:gene_model
Chromosome:Gm09
Start:7152210
stop:7155837
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g070100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G20635.1AT JGI N/AIEA
GO:0007186GO-bp G-protein coupled receptor signaling pathway EnsemblGenomesN/AIEA
GO:0007186GO-bp G-protein coupled receptor signaling pathway JGI N/AIEA
GO:0005834GO-cc heterotrimeric G-protein complex EnsemblGenomesN/AIEA
GO:0005834GO-cc heterotrimeric G-protein complex JGI N/AIEA
GO:0004871GO-mf signal transducer activity EnsemblGenomesN/AIEA
GO:0004871GO-mf signal transducer activity JGI N/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA

Expression Patterns of Glyma.09g070100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g070100 not represented in the dataset
Glyma.09g070100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09g070100
ParalogEvidenceComments
Glyma.15g178100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g070100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g08131 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.09g070100
>Glyma.09g070100.2 sequence-type=transcript locus=Glyma.09g070100 ID=Glyma.09g070100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AATCCGTTGCAGCCAGGCTCAGTTTCCATCAGATTGTCGCTGGTCACTGCCACTCTCCTTCATTTTTCCTTATTTCCCCCAGCCTGCAATAATAATGACTCTCTTTCTAGCCACTCTCATTTATGACCCTTTCCACTTTCCATAATGAAATTCAACCCTTTATTATTATCTCACTCTAAAAAACCGATCCTTGTGACACTATTGAGGCCTTGTTTCTTCTGGCAAAACTCCAATCTCTAGTTCGTTTTTTTGTTACCTtgtgtgtgtgtgtgtgtgtgtgagtgtgtTCTTAACTGTCCCTTGTCTGTGCCCCCTATTTACTGCCGCTGCCACAGTCATTTCATGTGGCATTCACACCTTAACAGACTCAAATAATATTATGATGTGCCTCCTCTCCTTTGCCACTTACAGTTACATTACTCACTCTTCATCACCCTCTTATTTCTTACTTGAGCATCAACAATGACCAAtactattactactactgctactaTCCCTTTCTGCTAACTAGCACTGTTTATTTCTTCTTCTGTTGGGGGCATTTACTAAGTTCAATTGAGAGAGCAGTGATGAGCACTTCCACAAGGGCAACTTCCAACATCCTTCTCTCTCTGCCACTGCCCTCTCCTAAGGCGGCGCCTCCTTCGTGCCCAGATTTGTATGGAAAGCGTCGCGAAATGGCCAAGATTCAGATGCTGGAAAGAGAGATAAGTTTCCTCGAGGAAGAGTTAAAATCTTCTGAAGGCCTTCAACCAGCTTCAAGATGCTGCAAAGAGATTGCCGATTTTGTGATGGCAAACTCAGATCCTCTGTTACCTACGAGCAAGAAGAACCACCGGTCATGTAGCTTCTGGAAGTGGCTTGACATCCCTTGCTTTAACTTGTCTTGGATCTGCCATTGGTGCTGTGATGGGTGCTTTGAACATCAAAACATGTCAAGTTGTTGTTCCCACTGCATGCCATGCAATTGCTGTTCTAGTTGTCTTCCATCTACCAATTGCTCTTGCTGCCCTAATGGAATATCACATTGCTGCAAAGATAGTTGTGGTTGCAAAATTTGTTGCACTCTCCCAAGTTGCAATATTGGGTGGCCTTTTCCctcttgctgcatttgcaaatgctcttgctcttgctcttggtcAGGCCCAAAAAAATGTCCCAAGGTTCGTCCATGTTGCTGTTGTACAAATTCCTGTTGGAACCCCTGTTCATGTTTCTAGTATAGTATCACAAAAAAATAAAATTTGTCTATAAAAATTGTATTTATAGTAGCAATTTTATGAAATTGGAAATATAGAAGTTTATAATTATAAATGTCCTGTTAATCTTTTTCATCATGTGGATACTACTACTTACTAGAAGCAAATGTAATATTTCTCACTAGCAATTATGG
Coding sequences of Glyma.09g070100
>Glyma.09g070100.1 sequence-type=CDS polypeptide=Glyma.09g070100.1.p locus=Glyma.09g070100 ID=Glyma.09g070100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCACTTCCACAAGGGCAACTTCCAACATCCTTCTCTCTCTGCCACTGCCCTCTCCTAAGGCGGCGCCTCCTTCGTGCCCAGATTTGTATGGAAAGCGTCGCGAAATGGCCAAGATTCAGATGCTGGAAAGAGAGATAAGTTTCCTCGAGGAAGAGTTAAAATCTTCTGAAGGCCTTCAACCAGCTTCAAGATGCTGCAAAGAGATTGCCGATTTTGTGATGGCAAACTCAGATCCTCTGTTACCTACGAGCAAGAAGAACCACCGGTCATGTAGCTTCTGGAAGTGGCTGTGTGACATCCCTTGCTTTAACTTGTCTTGGATCTGCCATTGGTGCTGTGATGGGTGCTTTGAACATCAAAACATGTCAAGTTGTTGTTCCCACTGCATGCCATGCAATTGCTGTTCTAGTTGTCTTCCATCTACCAATTGCTCTTGCTGCCCTAATGGAATATCACATTGCTGCAAAGATAGTTGTGGTTGCAAAATTTGTTGCACTCTCCCAAGTTGCAATATTGGGTGGCCTTTTCCCTCTTGCTGCATTTGCAAATGCTCTTGCTCTTGCTCTTGGTCAGGCCCAAAAAAATGTCCCAAGGTTCGTCCATGTTGCTGTTGTACAAATTCCTGTTGGAACCCCTGTTCATGTTTCTAG

>Glyma.09g070100.2 sequence-type=CDS polypeptide=Glyma.09g070100.2.p locus=Glyma.09g070100 ID=Glyma.09g070100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCACTTCCACAAGGGCAACTTCCAACATCCTTCTCTCTCTGCCACTGCCCTCTCCTAAGGCGGCGCCTCCTTCGTGCCCAGATTTGTATGGAAAGCGTCGCGAAATGGCCAAGATTCAGATGCTGGAAAGAGAGATAAGTTTCCTCGAGGAAGAGTTAAAATCTTCTGAAGGCCTTCAACCAGCTTCAAGATGCTGCAAAGAGATTGCCGATTTTGTGATGGCAAACTCAGATCCTCTGTTACCTACGAGCAAGAAGAACCACCGGTCATGTAGCTTCTGGAAGTGGCTTGACATCCCTTGCTTTAACTTGTCTTGGATCTGCCATTGGTGCTGTGATGGGTGCTTTGAACATCAAAACATGTCAAGTTGTTGTTCCCACTGCATGCCATGCAATTGCTGTTCTAGTTGTCTTCCATCTACCAATTGCTCTTGCTGCCCTAATGGAATATCACATTGCTGCAAAGATAGTTGTGGTTGCAAAATTTGTTGCACTCTCCCAAGTTGCAATATTGGGTGGCCTTTTCCCTCTTGCTGCATTTGCAAATGCTCTTGCTCTTGCTCTTGGTCAGGCCCAAAAAAATGTCCCAAGGTTCGTCCATGTTGCTGTTGTACAAATTCCTGTTGGAACCCCTGTTCATGTTTCTAG
Predicted protein sequences of Glyma.09g070100
>Glyma.09g070100.1.p sequence-type=predicted peptide transcript=Glyma.09g070100.1 locus=Glyma.09g070100 ID=Glyma.09g070100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSTRATSNILLSLPLPSPKAAPPSCPDLYGKRREMAKIQMLEREISFLEEELKSSEGLQPASRCCKEIADFVMANSDPLLPTSKKNHRSCSFWKWLCDIPCFNLSWICHWCCDGCFEHQNMSSCCSHCMPCNCCSSCLPSTNCSCCPNGISHCCKDSCGCKICCTLPSCNIGWPFPSCCICKCSCSCSWSGPKKCPKVRPCCCCTNSCWNPCSCF*

>Glyma.09g070100.2.p sequence-type=predicted peptide transcript=Glyma.09g070100.2 locus=Glyma.09g070100 ID=Glyma.09g070100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSTRATSNILLSLPLPSPKAAPPSCPDLYGKRREMAKIQMLEREISFLEEELKSSEGLQPASRCCKEIADFVMANSDPLLPTSKKNHRSCSFWKWLDIPCFNLSWICHWCCDGCFEHQNMSSCCSHCMPCNCCSSCLPSTNCSCCPNGISHCCKDSCGCKICCTLPSCNIGWPFPSCCICKCSCSCSWSGPKKCPKVRPCCCCTNSCWNPCSCF*






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