SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g068500

Feature Type:gene_model
Chromosome:Gm09
Start:6896581
stop:6900388
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g068500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G20510.1AT AL5 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0042393GO-mf histone binding JGI N/AIEA
KOG1632 KOG Uncharacterized PHD Zn-finger protein JGI N/AIEA
PTHR12321PantherFam CPG BINDING PROTEIN JGI N/AIEA
PF00628Pfam PHD-finger JGI N/AIEA
PF12165Pfam Alfin JGI N/AIEA

Proteins Associated with Glyma.09g068500
LocusGene SymbolProtein Name
PHD6 PHD finger protein GmPHD6

Gene model name correspondences to Glyma.09g068500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g07970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g068500
>Glyma.09g068500.1 sequence-type=CDS polypeptide=Glyma.09g068500.1.p locus=Glyma.09g068500 id=Glyma.09g068500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACAGTGGAGGACACTACAACCCCCGCACCGTCGAAGAGGTTTTCCGGGACTTCAAGGGCCGCCGGGCTGGCATGATCAAAGCCCTCACCACTGATGTTGAGGAATTTTACCAGCAGTGTGATCCTGAAAAGGAGAATTTATGTCTGTATGGATTCCCCACTGAACAATGGGAAGTAAATTTGCCTGCTGAAGAAGTTCCCCCAGAACTTCCCGAGCCAGCACTGGGCATAAATTTTGCTAGGGATGGGATGCAAGAAAAGGACTGGCTATCTTTAGTTGCTGTACACAGTGATGCATGGCTACAATCAGTGGCTTTCTACTTTGGGGCAAGATTTGGTTTTGATAAAGCTGACAGAAAGCGCCTGTTCACTATGATTAATGATTTGCCTACAATATTTGAGGTTGTAACTGGATCTGCAAAGAAACAGACAAAGGAGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGGGATTGGACGAAGAAGACGATGACGAGCATGGGGAGACCTTGTGTGGAGCATGTGGGGAGAACTATGCATCTGATGAGTTCTGGATTTGTTGCGACATATGTGAGAAGTGGTTTCATGGCAAGTGTGTGAAGATCACTCCTGCCCGGGCTGAGCACATCAAACACTACAAGTGCCCCTCATGCAGCAATAAGAGACCAAGGCCTTGA
Predicted protein sequences of Glyma.09g068500
>Glyma.09g068500.1.p sequence-type=predicted peptide transcript=Glyma.09g068500.1 locus=Glyma.09g068500 id=Glyma.09g068500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSGGHYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPTEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLQSVAFYFGARFGFDKADRKRLFTMINDLPTIFEVVTGSAKKQTKEKSSENNGNKSKSSSKGRGSEPPKYSKQVKDEEEGLDEEDDDEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPSCSNKRPRP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo