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Report for Sequence Feature Glyma.09g066600

Feature Type:gene_model
Chromosome:Gm09
Start:6536237
stop:6537514
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g066600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29810.1AT MAP kinase kinase 2 JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
PTHR24360Panther MAPKK/MEKK JGI N/AIEA
PTHR24360:SF39Panther JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA

Expression Patterns of Glyma.09g066600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g066600 not represented in the dataset
Glyma.09g066600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09g066600
ParalogEvidenceComments
Glyma.15g172600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g066600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.09g066600
>Glyma.09g066600.1 sequence-type=CDS polypeptide=Glyma.09g066600.1.p locus=Glyma.09g066600 ID=Glyma.09g066600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGGATGGTCCTTGGAAGATCTTCTGAGCAAAGTTAAAAAAATTCCAGAGTCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGCATCTTCACCATCAAAAACATATTATCCATAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGAGAGGTAAAGATTACTGACTTTGGTGTAAGTGTAATCATGGAAAACACATCTGGTCAAGCAAATACTTTCGTCGGCACATACAGCTATATGTCTCCAGAGAGAATCATTGGTAACCTGCATGGTTACAACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTACTCAAGTGTGCTACAGGAATTTTGCTCATTTATCTCAGCATGAATCATCCTTTTATCAACATTTATGAGGACTTGAATGTGGATCTTTCAGCGTATTTCTTCAATGCGGGATGTACACTTGCAACCATATAG
Predicted protein sequences of Glyma.09g066600
>Glyma.09g066600.1.p sequence-type=predicted peptide transcript=Glyma.09g066600.1 locus=Glyma.09g066600 ID=Glyma.09g066600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDGWSLEDLLSKVKKIPESYLAAICKQVLKGLMHLHHQKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMENTSGQANTFVGTYSYMSPERIIGNLHGYNYKSDIWSLGLILLKCATGILLIYLSMNHPFINIYEDLNVDLSAYFFNAGCTLATI*






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