SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g029300

Feature Type:gene_model
Chromosome:Gm09
Start:2388608
stop:2394404
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g029300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G49950.3AT ATTRB1,TRB1 JGI N/AIEA
GO:0006334GO-bp nucleosome assembly JGI N/AIEA
GO:0000786GO-cc nucleosome JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
K09422KEGG Transcription factors JGI N/AIEA
PTHR21717PantherFam TELOMERIC REPEAT BINDING PROTEIN JGI N/AIEA
PF00249Pfam Myb-like DNA-binding domain JGI N/AIEA
PF00538Pfam linker histone H1 and H5 family JGI N/AIEA

Proteins Associated with Glyma.09g029300
LocusGene SymbolProtein Name
MYB55 MYB transcription factor

Gene model name correspondences to Glyma.09g029300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g03390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g029300
>Glyma.09g029300.2 sequence-type=CDS polypeptide=Glyma.09g029300.2.p locus=Glyma.09g029300 id=Glyma.09g029300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGCTCCGAAGCAGAAATGGACTGCAGAAGAGGAACAAGCACTTAAAGCCGGAGTTGTCAAGCATGGTGTTGGTAAATGGCGCACCATACTGAAGGATCCAGAGTTTAGTAGTGTCTTGTACCTGCGGTCAAATGTGGATCTCAAGGATAAATGGAGAAATCTGAGTGTGATGGCAAATGGATGGAGCTCTAGGGAAAAATCTAGGTTATCAGTCAGAAGGGTGCATCAGGTCCCGAGACAGGATGAGAACTCTATGGCTATCACTGCTGTTGCTCCAAGTGATGAAGAAATTGTTGATGTTAAGCCTCTTCAAGTTTCTAGAGATATGGTGCATATTCCTGGTCCAAAGAGGTCTAATTTAAGTTTGGATAAACTTATAATGGAAGCGATCACTTGCTTGAAGGAGAATGGTGGTTCTAATAAGACAGCTATTGCAGCTTTCATAGAGGACCAATATTGGGCACTGCCAGGCTTAAAAAGTATGTTGTCTGCAAAATTAAAGTTTTTGACAGCAAGTGGAAAACTGATCAAGGTAAATCGCAAGTATAGAATTGCACCTATAGCAGCATATTCTGACAGAAGAAGAAACTCATCCGTGTTATATTTGGAAGGGAGGCAGAAAGCCTCTATGAAAATTGACAGGGATGAGACCAACATCCTTACTAGATCTCAGATAGATTTAGAGTTAGAAAAGATAAGGTCTATGACTCCACAAGAGGCAGCTGCATTTGCTGCTCGAGCAGTTGCTGAAGCAGAAGCCGCCATTGCAGAAGCAGAGGAGGCAGCAAAGGAAGCAGAGGCAGCAGAAGCTGATGCGGAGGCTGCACAAGCTTTTGCAGATGCTACAACAAAATCAGCGAAAGGGAGAAAATCCCCAAAGAGGATCCATGCTTGA

>Glyma.09g029300.4 sequence-type=CDS polypeptide=Glyma.09g029300.4.p locus=Glyma.09g029300 id=Glyma.09g029300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGCTCCGAAGCAGAAATGGACTGCAGAAGAGGAACAAGCACTTAAAGCCGGAGTTGTCAAGCATGGTGTTGGTAAATGGCGCACCATACTGAAGGATCCAGAGTTTAGTAGTGTCTTGTACCTGCGGTCAAATGTGGATCTCAAGGATAAATGGAGAAATCTGAGTGTGATGGCAAATGGATGGAGCTCTAGGGAAAAATCTAGGTTATCAGTCAGAAGGGTGCATCAGGTCCCGAGACAGGATGAGAACTCTATGGCTATCACTGCTGTTGCTCCAAGTGATGAAGAAATTGTTGATGTTAAGCCTCTTCAAGTTTCTAGAGATATGGTGCATATTCCTGGTCCAAAGAGGTCTAATTTAAGTTTGGATAAACTTATAATGGAAGCGATCACTTGCTTGAAGGAGAATGGTGGTTCTAATAAGACAGCTATTGCAGCTTTCATAGAGGACCAATATTGGGCACTGCCAGGCTTAAAAAGTATGTTGTCTGCAAAATTAAAGTTTTTGACAGCAAGTGGAAAACTGATCAAGGTAAATCGCAAGTATAGAATTGCACCTATAGCAGCATATTCTGACAGAAGAAGAAACTCATCCGTGTTATATTTGGAAGGGAGGCAGAAAGCCTCTATGAAAATTGACAGGGATGAGACCAACATCCTTACTAGATCTCAGATAGATTTAGAGTTAGAAAAGATAAGGTCTATGACTCCACAAGAGGCAGCTGCATTTGCTGCTCGAGCAGTTGCTGAAGCAGAAGCCGCCATTGCAGAAGCAGAGGAGGCAGCAAAGGAAGCAGAGGCAGCAGAAGCTGATGCGGAGGCTGCACAAGCTTTTGCAGATGCTACAACAAAATCAGCGAAAGGGAGAAAATCCCCAAAGAGGATCCATGCTTGA
Predicted protein sequences of Glyma.09g029300
>Glyma.09g029300.2.p sequence-type=predicted peptide transcript=Glyma.09g029300.2 locus=Glyma.09g029300 id=Glyma.09g029300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGAPKQKWTAEEEQALKAGVVKHGVGKWRTILKDPEFSSVLYLRSNVDLKDKWRNLSVMANGWSSREKSRLSVRRVHQVPRQDENSMAITAVAPSDEEIVDVKPLQVSRDMVHIPGPKRSNLSLDKLIMEAITCLKENGGSNKTAIAAFIEDQYWALPGLKSMLSAKLKFLTASGKLIKVNRKYRIAPIAAYSDRRRNSSVLYLEGRQKASMKIDRDETNILTRSQIDLELEKIRSMTPQEAAAFAARAVAEAEAAIAEAEEAAKEAEAAEADAEAAQAFADATTKSAKGRKSPKRIHA*

>Glyma.09g029300.4.p sequence-type=predicted peptide transcript=Glyma.09g029300.4 locus=Glyma.09g029300 id=Glyma.09g029300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGAPKQKWTAEEEQALKAGVVKHGVGKWRTILKDPEFSSVLYLRSNVDLKDKWRNLSVMANGWSSREKSRLSVRRVHQVPRQDENSMAITAVAPSDEEIVDVKPLQVSRDMVHIPGPKRSNLSLDKLIMEAITCLKENGGSNKTAIAAFIEDQYWALPGLKSMLSAKLKFLTASGKLIKVNRKYRIAPIAAYSDRRRNSSVLYLEGRQKASMKIDRDETNILTRSQIDLELEKIRSMTPQEAAAFAARAVAEAEAAIAEAEEAAKEAEAAEADAEAAQAFADATTKSAKGRKSPKRIHA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo