Glyma.09g025400

Report for Sequence Feature Glyma.09g025400

Feature Type:	gene_model
Chromosome:	Gm09
Start:	2053359
stop:	2068481
Source:	JGI
Version:	Wm82.a4.v1
High confidence:	yes

Annotations for Glyma.09g025400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G03300.1	AT	ATDCL2,DCL2	JGI	N/A	IEA
3.1.26.3	EC	ribonuclease III	JGI	N/A	IEA
GO:0006396	GO-bp	RNA processing	JGI	N/A	IEA
GO:0003676	GO-mf	nucleic acid binding	JGI	N/A	IEA
GO:0003723	GO-mf	RNA binding	JGI	N/A	IEA
GO:0004525	GO-mf	ribonuclease III activity	JGI	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0016891	GO-mf	endoribonuclease activity, producing 5'-phosphomonoesters	JGI	N/A	IEA
K11592	KEGG	Chromosome and associated proteins	JGI	N/A	IEA
KOG0701	KOG	dsRNA-specific nuclease Dicer and related ribonucleases	JGI	N/A	IEA
PTHR14950	PantherFam	DICER-RELATED	JGI	N/A	IEA
PF00270	Pfam	DEAD/DEAH box helicase	JGI	N/A	IEA
PF00271	Pfam	Helicase conserved C-terminal domain	JGI	N/A	IEA
PF00636	Pfam	Ribonuclease III domain	JGI	N/A	IEA
PF02170	Pfam	PAZ domain	JGI	N/A	IEA
PF03368	Pfam	Dicer dimerisation domain	JGI	N/A	IEA

Proteins Associated with Glyma.09g025400

Locus	Gene Symbol	Protein Name
	DCL2A	endoribonuclease dicer-like 2a

Gene model name correspondences to Glyma.09g025400 Gene Call Version Wm82.a4.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g02930	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.09g025400

Limit To All Plant Sequences

>Glyma.09g025400.1 sequence-type=CDS polypeptide=Glyma.09g025400.1.p locus=Glyma.09g025400 id=Glyma.09g025400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGAAGTACTCCCAGTGGAAATGGATTCCAATACCCAGCAGCAGCAGAAGGTTATTAGTGCTGATGTTCTTTCGTTTGCCAGAAGCTATCAACTTGAAGCATTGGACAATGCTATCCGTGAGAATACCATTGTCTACTTGGAGACTGGTTCTGGCAAGACTTTGATAGCCGTCATGCTTCTTCGAAGCTATGCTCATCATCTGCGAAAGCCTTCTCCTCAAATTGCAGTGTTCTTGGTTCCCAAAGTTGTGTTGGTCTCTCAACAAGCCGAAGCCGTGAAAAAACACACTGATTTAAAAGTGGGATTGTATTGGGGAGATATGGGAATTGACTTCTGGGATGCTGCTACCTGGAAACAGGAAGTACAGAAATATGAGGTGTTTGTCATGACTCCTGCAATATTGCTGAATTGCTTGAGGCATAGCTTCTTGAAACTGAATTTGATAAAGGTTTTGATAATGGATGAATGCCATCATGCTAGGGGTAAACACCCTTATGCTAGCATCATGACTGAGTTTTATCATCACCAATTAAATTCTGGTATCTCTGACCTCCCTCGAATTTTTGGGATGACTGCATCTCCAATTAAGTCAAAAGTTGGAAATTGTGAATTATCCTGGTCAGAGAATATTCGGAAACTAATGACTCTAATGCATTCAAAGGTATATACATGTGTAAGTGAAGCTGTCCTCACAGAGTTCATACCAACATCAACACCAAAATTCAAGTTTTACCAGGGCAATGAAGTTCAATCTGTATTATTTGAAGATTTAGCATTTAAACTGAAGATGTTAAAAGAGCAGCATGAATCCAATCTAAAAAGTTCAGATTTCACTAAATCAGCAGCTGAGTTTGCACGAAGAAGAACAAAAAAGATTTTTTCTGCTTTAATATTTTGCCTGGATGAGCTTGGTGTTTGGTTGGCTTTGAAGGCTGCAGAATCTTTATCTTCTAATGATATTCAATTATTTTCATGGGGACATTCTGGGGATACAGTTGTTAAAAACTTTATTTCAGCTGGTGTGCAAACACTCAAAACTTACTTACCATGTGGTCCTCAGTGGTCAATTGGTGACAATATTAAATATGATGTGGAGATGGAGCTGTTATCCTCCAAAGTTTGCTGTCTTATTGACTCTATACTTGAGTACAGGGGTTTGACTGACATGAGATGCATAATTTTTGTGGAAAGGGTCATTACAGCCGTTGTCCTTCGGGATCTATTAAATACCTTGCTTCCAAAATACAATAGCTGGAAGACTAAATTTATTGCAGGACAAAATTTTGGATTGCAAAATCAGTCTAGGAAAAAACAAAATGAAATCGTGGAAGAATTTCGAATGGGATTGGTCAATATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTTGAAAGTTGCAATTTAGTTATTAGATTTGATCCATGTCACACAGTGTGTAGTTTCATACAGTCCCGAGGACGTGCCAGAATGCAAAATTCAGATTATATATTAATGGTTAAGAGTGGGGATTCAGTTACATGTTCTCGACTAGCGAAATACCTTGCTAGCGGGGATATTATGAGAAAGGAGTCATTGCGCCATTCTTCCCTTCCATGTGATCCTCTTGAAGAAGATAGATTTGACAAGGAAACTTATCGCGTTGCAAGCACTGAAGCCTTTGCAAATCTTAGTTCTAGCATTAGTTTGATACACTTGTATTGCTCACGGCTCCCTGCAGATGGGTACTTTAAACCAACTCTGAGGTGGGACAAAGAGACTGGAACATTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTATTCGTGTAGAAGGAGATAAAAAAATCTTAAAGAATATCGCATGCCTTGAAGCATGTAAACAACTTCATAAGATTGGAGCTTTGTCAGATAATCTTGTTCCTGATATTGTCATGGAAGAAGCAGAGGTGGAGGAATTAGGGAATGAACCTTATGATGAAAACCAACCAACTTTTGTCCCATTTGGATTGGTAAATTCTGTGTCAAATAATAGTCAAACGGTCTATCATTGTTATTTCATGGAATTCAATAACAAATTTAGCTATGATGTATCTGTCCAAGATATTTTTCTTCTCATGCGAATTGAGCTCGATCCAGAAATTGGATGCATGCAATTTGATATGGGTTTTGACAGAGGTAGCTTGTCGGTAAACTTTAGATACAAAGGAACCATTAATCTTTCGCCTGATCAGGTTCTTTTGTGTAAAAAATTCCAAGTTACTATACTTAGAATTCTAATAGATCATGATATGAATAAGTTGACTGCTGGTTTGGACAGATGCTATTTGGAAGATGATCTTGAGATTGATTATCTTCTGCTTCCAGCTATGGGTAAAGGGAAATATACAGCTATTAATTGGTTAGCTGTTAATTCTGTAAATCCATCTGAAGTTAGCTGTAAGTATCATGAACCCCACATAAGGACAAAAAGTGGTTTAGTTTGCAGTTGTAAACTACAAAATGCATTGGTTTGTACTTCCCACCCTATTGGTAAGATTAGCTTCTATATTGCCACCGGTACAATGGAATTGGATGGAAATTCACCTATGGAACTAAGGGGTGGTGGGGTTACTACGTACAAGAAGTACTATGAACAACACCATGGCATTCAATTGCAATTTGAACATCAACGACTACTTAAAGCAAGGCACATTTTTCAAGTTAAAAATCACTGTCATGGACGCAAACAAGGGAAGGAAGGAGAAGTAAGCAAGGCCTTTGTTGAATTACCTCCTGAACTGTGTTCGATAGTCATGATGCCGATATCAGATAGTCTCATTTATTCCTACTCATTTATTCCGTCAATCATGCATCGGTTTGAATCATTGCTTGGAGCTTTCAACTTAAAAAAGATGCATTTGGATCATTGTGCACGGAATGAAATTCAAACAATCAAGGTGTTGGAAGCAATCACAACGAAAAGGTGCAAAGAGGCCTTTCATTATGAGTCTCTGGAGACTCTTGGTGATTCTTTTTTAAAATATGCTGCGAGTCAACAGCTGTTTAAAACCTATCATAATCACCATGAAGGTCTCCTTAGTCTGAAGAGGGAAAAGATCATTTCTAATGCTGCCCTCTGTAAGTTGGGGTGCAGTTCTGGACTTCCGGGTTTCATACGGAATGAGCCTTTTGATCCTAATACCTGGATTATTCCTGGTGATAAGCCTAGAAGTTTTAAATTGAAAGAGTTGGTTGCCAAGGGGAAAACAATTTATGTTAGTGGAAAAAGAAAATTAAGACAGAAGATTGTTGCTGATGTTGTCGAGGCATTAATTGGTGCCTTCCTCAGCACTGGTGGTGAAAAGGCTGCATTGTTGTTTATGGATTGGGTTGGTATTAAAGTGAGTTTTAATAAAATACCGTATGACAGACACTTTGACATTCAACCGGAGAAGCTGGTAAATGTCAGTTTTCTAGAATCGCAATTAAATTACTCATTCCATGACCGTTCCCTTTTAGTGGAAGCTGTGACCCATGGTTCATACATGCTGCCTGAAGTTCCTAGATGTTATCAGCGACTAGAATTTCTAGGAGATTCAGTATTGGATTATCTGATTACTTGGCATTTGTACAATAAATACCCTGGCATGACACCTGGGCAGTTAACTGACATGAGGTCAGCTTCGGTGAATAATGATTGTTATGCATGGTCCGCCATTAAGCATGGGTTGCACAAACATGTACTCCATGCCTCACAAGAACTGCATATGCATGTTTCTGCTACACTCAACAAATTTGATAAGCTATCTTCATTGTCCACTTTTGGTTACGAGGCAGAGACATCACTCCCTAAGGTACTTGGAGACATTGTAGAGTCTCTGGCTGGAGCAATTCTTGTTGATTCAGGATACAACAAGGAGGTTGTGTGGCAAAGCATAAGGCCACTTTTGGAACCCCTTGTGACACCAGAAACATTAAAGCTCCATCCCATCCGAGAGTTGAATGAGCTATGCCAAAAAAGAAGTTATAAGATTATACTAGAGGACGTGTCCCGCAAAGATGGTCTGACTTATTATAGAATGGAGGTAGAAGCTGATGGGATCATTCACAAGTACGAGTATAAAGGTGATGCTCTTAGGGACACAGCCAAGAAGATAGTCTGCAAGGAAATTTTGAATTCCTTGAAGGATGGCGGTGCTCATAAGGACACAGCCAAGAAGATAGTCTGCGAGGAAAAATTAAATTCCTTGAAGGAAGGAGAATCAAATGGTGCATAA

Predicted protein sequences of Glyma.09g025400

Limit To All Plant Sequences

>Glyma.09g025400.1.p sequence-type=predicted peptide transcript=Glyma.09g025400.1 locus=Glyma.09g025400 id=Glyma.09g025400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEVLPVEMDSNTQQQQKVISADVLSFARSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSYAHHLRKPSPQIAVFLVPKVVLVSQQAEAVKKHTDLKVGLYWGDMGIDFWDAATWKQEVQKYEVFVMTPAILLNCLRHSFLKLNLIKVLIMDECHHARGKHPYASIMTEFYHHQLNSGISDLPRIFGMTASPIKSKVGNCELSWSENIRKLMTLMHSKVYTCVSEAVLTEFIPTSTPKFKFYQGNEVQSVLFEDLAFKLKMLKEQHESNLKSSDFTKSAAEFARRRTKKIFSALIFCLDELGVWLALKAAESLSSNDIQLFSWGHSGDTVVKNFISAGVQTLKTYLPCGPQWSIGDNIKYDVEMELLSSKVCCLIDSILEYRGLTDMRCIIFVERVITAVVLRDLLNTLLPKYNSWKTKFIAGQNFGLQNQSRKKQNEIVEEFRMGLVNIIVATSILEEGLDVESCNLVIRFDPCHTVCSFIQSRGRARMQNSDYILMVKSGDSVTCSRLAKYLASGDIMRKESLRHSSLPCDPLEEDRFDKETYRVASTEAFANLSSSISLIHLYCSRLPADGYFKPTLRWDKETGTLYLPKSCPLQPIRVEGDKKILKNIACLEACKQLHKIGALSDNLVPDIVMEEAEVEELGNEPYDENQPTFVPFGLVNSVSNNSQTVYHCYFMEFNNKFSYDVSVQDIFLLMRIELDPEIGCMQFDMGFDRGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDRCYLEDDLEIDYLLLPAMGKGKYTAINWLAVNSVNPSEVSCKYHEPHIRTKSGLVCSCKLQNALVCTSHPIGKISFYIATGTMELDGNSPMELRGGGVTTYKKYYEQHHGIQLQFEHQRLLKARHIFQVKNHCHGRKQGKEGEVSKAFVELPPELCSIVMMPISDSLIYSYSFIPSIMHRFESLLGAFNLKKMHLDHCARNEIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKYAASQQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGDKPRSFKLKELVAKGKTIYVSGKRKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNVSFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPGMTPGQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQELHMHVSATLNKFDKLSSLSTFGYEAETSLPKVLGDIVESLAGAILVDSGYNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIILEDVSRKDGLTYYRMEVEADGIIHKYEYKGDALRDTAKKIVCKEILNSLKDGGAHKDTAKKIVCEEKLNSLKEGESNGA*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain