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Report for Sequence Feature Glyma.09g020000

Feature Type:gene_model
Chromosome:Gm09
Start:1576594
stop:1581727
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g020000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G19670.2AT JGI N/AIEA
6.3.2.19EC JGI N/AIEA
GO:0016567GO-bp protein ubiquitination JGI N/AIEA
GO:0004842GO-mf ubiquitin-protein transferase activity JGI N/AIEA
KOG1812 KOG Predicted E3 ubiquitin ligase JGI N/AIEA
PTHR11685PantherFam RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING JGI N/AIEA
PF01485Pfam IBR domain, a half RING-finger domain JGI N/AIEA
PF13456Pfam Reverse transcriptase-like JGI N/AIEA

Proteins Associated with Glyma.09g020000
LocusGene SymbolProtein Name
RTRP3 reverse transcriptase-like domain-containing RBR protein

Gene model name correspondences to Glyma.09g020000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g02340 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g020000
>Glyma.09g020000.1 sequence-type=CDS polypeptide=Glyma.09g020000.1.p locus=Glyma.09g020000 id=Glyma.09g020000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATCAAGGTGTTAATGTTGGGAGAGAGGAAGAGGAAGATGAGTTTTGCAGTTGTTGTGGAGATGAAGATGAGGAAGTGTGGAAAGAGACTGAGGAACCTGTTGTGGAAAAAGGGTTGAAGGATGAGCTTGATGAATTTTCAGTGAAAATGTTCTTTAAGGGGTTGTCAATGGCAGGGGTCGAAAATTTAAGTTCTGGGTTTTCAGGGATTGGAGTGTTCATGGAAAGGTCTTCAGGTCTACCTGCTATAAGGGTGCAGAAAAAGCTTGACTTTTATGCGGAGGAGTCTGTGGTTGACTATTTGGCACTCTTGGATGGGTTGCTGGAAGCTGTGCAGAAAAAGATCCGCAGGGTTTTTGCTTTCACTGATTCTGAGTTGTTGCATGATCAGATAACATTTGGGAAAAAATTGGAGATGCCTCTTTTGACGGCACTGCGAGAAAGGATTCTTGAACTTGCCAATAATTTTGAAGATTTTGTTTTAAAGCTTATACCTTCTAGTGATCTTGAGCAGCCACTGCATTTGGCCAAAGTAGCTATTGGACTTGTTACTTTCCCTGTAAATGATGAGAGATTGCTTAAGAACTGTTCTATTTGCTGTGATGACAAGCCAGTGCCAATTATGATTACCTTAAAATGTTCTCACACATTCTGTTCACATTGCTTGAGGGCCTATGCTGATGGTAAAGTACAATCTTGTCAAGTCCCTATAAGATGCCCTCAACCAGGATGCAAGTATTGCACATCTGTAACTGAGTGCAGGTCTTTTCTTCCATTCACCTCCTTTGAATCTCTGGAGAAATCCCTTTCTGAAGCAAATATTGGCTGTTCAGATAGAATTTATTGTCCATTTCCAAATTGCTCTGTTCTCCTTGATCCTCATGAATGTTCATCAGCAAGGGACTGTTCATCTAGTCAGTCTGACAACTCTTGTATCGAGTGTCCTGTTTGTCGGAGGTTTATCTGTGTGGATTGTAAGGTTCCTTGGCATTCTTCTATGAGTTGTGTAGAATACCAGAATCTGCCAGAGGAGAGGGATGCTTCTGACATTACCTTTCACCGTCTTGCTCAGAATAAAAGGTGGAAGCGTTGTCAGCAGTGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTGGTGTGGACATGAGTTTTGCTATTCATGTGGTGGGGAGTACCGAGAAGGGCAACAAACATGCCAGTGTGCATATTGGGATGAAGATAACTCTGATGACTCAGTGGCGCACTCTCTTCAAGAATCAGAACAATGGGCATGGGAGACATTCAATTCTCTCTCCATGATTGTGGATGCATACTCGGACCAAGAACGATCGCAGCTTGCTCTTATTCAAAGGTTCCTAACTGGGGGTTTCAGTCTCAGTGACCATAATCCTTACCAATCTCCTCCTCGCAGTACAGAGTCCTATGTAGACCCCATGAAGGATCTACATCAACTTCCATGGCTAGAGAGGTTTGTGTCTGTGATTAGTGACAACTACTATGAGGATTACATTCAATGA
Predicted protein sequences of Glyma.09g020000
>Glyma.09g020000.1.p sequence-type=predicted peptide transcript=Glyma.09g020000.1 locus=Glyma.09g020000 id=Glyma.09g020000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDQGVNVGREEEEDEFCSCCGDEDEEVWKETEEPVVEKGLKDELDEFSVKMFFKGLSMAGVENLSSGFSGIGVFMERSSGLPAIRVQKKLDFYAEESVVDYLALLDGLLEAVQKKIRRVFAFTDSELLHDQITFGKKLEMPLLTALRERILELANNFEDFVLKLIPSSDLEQPLHLAKVAIGLVTFPVNDERLLKNCSICCDDKPVPIMITLKCSHTFCSHCLRAYADGKVQSCQVPIRCPQPGCKYCTSVTECRSFLPFTSFESLEKSLSEANIGCSDRIYCPFPNCSVLLDPHECSSARDCSSSQSDNSCIECPVCRRFICVDCKVPWHSSMSCVEYQNLPEERDASDITFHRLAQNKRWKRCQQCRRTIELTQGCYHMTCWCGHEFCYSCGGEYREGQQTCQCAYWDEDNSDDSVAHSLQESEQWAWETFNSLSMIVDAYSDQERSQLALIQRFLTGGFSLSDHNPYQSPPRSTESYVDPMKDLHQLPWLERFVSVISDNYYEDYIQ*






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