Report for Sequence Feature Glyma.09g003900
| Feature Type: | gene_model |
| Chromosome: | Gm09 |
| Start: | 317210 |
| stop: | 319458 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.09g003900
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G62040.2 | AT |
ATG8C |
JGI | N/A | IEA |
| GO:0000045 | GO-bp |
autophagosome assembly |
JGI | N/A | IEA |
| GO:0005737 | GO-cc |
cytoplasm |
JGI | N/A | IEA |
| K08341 | KEGG |
Mitochondrial biogenesis |
JGI | N/A | IEA |
| KOG1654 |
KOG |
Microtubule-associated anchor protein involved in autophagy and membrane trafficking |
JGI | N/A | IEA |
| PTHR10969 | PantherFam |
MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
JGI | N/A | IEA |
| PF04110 | Pfam |
Ubiquitin-like autophagy protein Apg12 |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.09g003900 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma09g00630 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.09g003900
>Glyma.09g003900.4 sequence-type=CDS polypeptide=Glyma.09g003900.4.p locus=Glyma.09g003900 id=Glyma.09g003900.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCAAAACCTCCTTCAAGCTTCAGCATCCTTTGGAAAGAAGGCAGGCTGAAGCTTCTCGCATTAGAGAGAAATATCCTGATAGAATACCTGTGATTGTGGAGAAAGCTGAAAGAAGTGACATTCCTGACATTGATAAGAAAAAATACCTTGTCCCTGCTGATTTGACTGTTGGCCAGTTTGTATATGTTGTCCGCAAAAGGATTAAGCTCAGTGCAGAGAAGGCTATTTTTGTTTTCATCAATAACACTCTGCCTCCAACTGCTGCATTGATGTCTGCTATTTATGAAGAAAATAAGGATCAAGATGGCTTTCTTTACATGACTTACAGTGGAGAGAACACCTTCGGATCCCACTAG
Predicted protein sequences of Glyma.09g003900
>Glyma.09g003900.4.p sequence-type=predicted peptide transcript=Glyma.09g003900.4 locus=Glyma.09g003900 id=Glyma.09g003900.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKTSFKLQHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDQDGFLYMTYSGENTFGSH*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
