SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09G279100

Feature Type:gene_model
Chromosome:Gm09
Start:49439843
stop:49442291
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09G279100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G26300.1AT cytochrome P450, family 71, subfamily B, polypeptide 34 JGI N/AIEA
GO:0044550GO-bp secondary metabolite biosynthetic process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0004497GO-mf monooxygenase activity EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding JGI N/AIEA
GO:0009055GO-mf electron carrier activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen EnsemblGenomesN/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen JGI N/AIEA
GO:0016709GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG0156 KOG Cytochrome P450 CYP2 subfamily JGI N/AIEA
PTHR24298Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24298:SF44Panther JGI N/AIEA
PF00067PFAM Cytochrome P450 JGI N/AIEA
PWY-5061SoyCyc9 6,7,4'-trihydroxyisoflavone biosynthesis Plant Metabolic Network ISS
GN7V-63654SoyCyc9-rxn flavone-6-hydroxylase Plant Metabolic Network ISS

Expression Patterns of Glyma.09G279100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09G279100
ParalogEvidenceComments
Glyma.20g007000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09G279100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g279100 Wm82.a4.v1ISS As supplied by JGI
Glyma09g41570 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09G279100
>Glyma.09g279100.1 sequence-type=CDS polypeptide=Glyma.09g279100.1.p locus=Glyma.09g279100 ID=Glyma.09g279100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCAATATAGTAGCCATTATCAGTTTTTCTCTCATCTTGATTGTGGTACTGATGAAAATAGTGAGGAATCATAAGAAAACAAAACCAACTCCAAATGTACCTCCAGGGCCATGGAAGCTACCTGTTATAGGAAATGTACACCAAATTATTACATCCGCACCACATAGAAAATTGAGAGACCTAGCCAAAATCTATGGACCTTTGATGCATCTCCAACTTGGAGAAGTCACCACAATTATTGTTTCCTCACCCGAGTGTGCTAAAGAGATAATGAAAACTCATGATGTGATCTTTGCATCAAGGCCTCGTGGTGTAGTTACAAACATATTGTCTTATGAATCCACAGGTGTTGCTTCTGCACCTTTTGGAAATTATTGGAGAGTGCTACGAAAGATGTGCACCATAGAGCTTTTGTCCCAAAAACGTGTCGATTCATTCCAGCCAATAAGAGAAGAAGAACTCACTACTCTCATCAAAATGTTTGATTCTCAAAAAGGGTCACCCATCAACCTCACTCAAGTAGTACTTTCATCAATATATTCTATCATTTCAAGAGCTGCTTTTGGCAAGAAATGCAAAGGCCAAGAAGAATTCATATCATTGGTGAAAGAAGGACTCACAATATTGGGTGATTTTTTTCCTTCTAGTAGATGGCTTCTACTTGTCACCGATTTGAGGCCTCAGCTTGATAGATTGCATGCACAAGTTGATCAGATTCTAGAAAACATCATCATTGAACATAAAGAGGCAAAGTCAAAAGTAAGAGAAGGCCAAGATGAAGAAAAGGAAGATTTGGTAGACATTCTCCTAAAACTTCAGGATGGTGACGATAGTAACAAGGATTTTTTCTTAACTAATGACAATATCAAGGCTACAATCTTGGAAATCTTTAGTGCTGGGGGTGAGCCATCAGCAATTACCATAGATTGGGCAATGTCTGAGATGGCAAGGGATCCAAGAGTGATGAAGAAAGCACAAGATGAAGTGAGAATGGTATTCAATATGAAGGGAAGGGTTGATGAAACATGCATCAATGAACTCAAATATTTGAAATCAGTTGTGAAAGAAACCCTAAGATTACACCCTCCAGGTCCTCTTTTACTTCCAAGAGAATCAACACAAGAATGTAAGATTCATGGGTATGACATACCCATCAAAAGCAAGGTAATAGTTAATGCCTGGGCAATTGGAAGAGATCCAAACTATTGGAATGAACCAGAGAGGTTTTATCCAGAAAGATTCATTGATAGCTCTATTGACTATAAAGGGAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCAGCACATTTGGTTTGGTAAATGTTGAGATGGCACTTGCATTGTTCTTGTATCACTTTGATTGGAAGCTCCCCAATGGAATACAAAATGAAGACTTGGACATGACTGAGGAATTTAAAGTGACTATTAGAAGAAAAAATGACCTGTGCTTGATTCCTGTATCTCCTCCTTGTTCTGTGGTTGCAATGTATAGCTCATAA
Predicted protein sequences of Glyma.09G279100
>Glyma.09g279100.1.p sequence-type=predicted peptide transcript=Glyma.09g279100.1 locus=Glyma.09g279100 ID=Glyma.09g279100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTNIVAIISFSLILIVVLMKIVRNHKKTKPTPNVPPGPWKLPVIGNVHQIITSAPHRKLRDLAKIYGPLMHLQLGEVTTIIVSSPECAKEIMKTHDVIFASRPRGVVTNILSYESTGVASAPFGNYWRVLRKMCTIELLSQKRVDSFQPIREEELTTLIKMFDSQKGSPINLTQVVLSSIYSIISRAAFGKKCKGQEEFISLVKEGLTILGDFFPSSRWLLLVTDLRPQLDRLHAQVDQILENIIIEHKEAKSKVREGQDEEKEDLVDILLKLQDGDDSNKDFFLTNDNIKATILEIFSAGGEPSAITIDWAMSEMARDPRVMKKAQDEVRMVFNMKGRVDETCINELKYLKSVVKETLRLHPPGPLLLPRESTQECKIHGYDIPIKSKVIVNAWAIGRDPNYWNEPERFYPERFIDSSIDYKGNNFEYIPFGAGRRICPGSTFGLVNVEMALALFLYHFDWKLPNGIQNEDLDMTEEFKVTIRRKNDLCLIPVSPPCSVVAMYSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo