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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G65140.2 | AT | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | JGI | N/A | IEA |
| GO:0005992 | GO-bp | trehalose biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0005992 | GO-bp | trehalose biosynthetic process | JGI | N/A | IEA |
| GO:0007018 | GO-bp | microtubule-based movement | EnsemblGenomes | N/A | IEA |
| GO:0007018 | GO-bp | microtubule-based movement | JGI | N/A | IEA |
| GO:0000166 | GO-mf | nucleotide binding | EnsemblGenomes | N/A | IEA |
| GO:0003777 | GO-mf | microtubule motor activity | EnsemblGenomes | N/A | IEA |
| GO:0003777 | GO-mf | microtubule motor activity | JGI | N/A | IEA |
| GO:0003824 | GO-mf | catalytic activity | EnsemblGenomes | N/A | IEA |
| GO:0003824 | GO-mf | catalytic activity | JGI | N/A | IEA |
| GO:0005515 | GO-mf | protein binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| GO:0008017 | GO-mf | microtubule binding | EnsemblGenomes | N/A | IEA |
| GO:0008017 | GO-mf | microtubule binding | JGI | N/A | IEA |
| PTHR10788 | Panther | TREHALOSE-6-PHOSPHATE SYNTHASE | JGI | N/A | IEA |
| PF00225 | PFAM | Kinesin motor domain | JGI | N/A | IEA |
| PF01535 | PFAM | PPR repeat | JGI | N/A | IEA |
| PF02358 | PFAM | Trehalose-phosphatase | JGI | N/A | IEA |
| TRESYN-PWY | SoyCyc9 | trehalose biosynthesis I | Plant Metabolic Network | ISS | |
| GN7V-41350 | SoyCyc9-rxn | trehalose-phosphatase | Plant Metabolic Network | ISS |
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Glyma.09G146300 not represented in the dataset |
Glyma.09G146300 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
>Glyma.09g146300.1 sequence-type=CDS polypeptide=Glyma.09g146300.1.p locus=Glyma.09g146300 ID=Glyma.09g146300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCGAAGAAACCCATCATTTATTCTGTCAACTGCACACCATTTAAGCTTCACCATCCATCGGCATTAGACATGTTTGACAAAATTATTGACGCGTCAAAGGGAAAACAATTTTTCATGTTTTTGGACTATGATGACACGTTGTCTCCTATAGTCGACGACCCTGACCGTGCTTTCATGTGTGATTCGATGCAAAGACAAGAGCTATATTATGTAGGAAGCCATGGCATGGATATTAAAGGACCAACAACAACCTCCAAATACAACAAAGATAGCAAAGCTGAGCCAATCCTTTGTCAACCTGCCAGTGATTTTCTTCCCTTGATAGATGAGGTGTATCAACAATTAGTTGAAAAGACAAAATCAACTCCTGGAGCTCTGGTTGAGAACAACAAGTTATGTCTTTCAGTCCATTTTCGTTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCGAAGCTTCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAAGCCTTGGAATTTTTATTAGAGTCACTAGAACAAAAAGAAATGTTAAGAAATGAGTTGGAGCTTATGAATAAATCACTTGAGGAATCTGAGGCTCAGTTACAGAGTAGAACAGTGGAAAGCAATGAGCTGGTGAGCCAAATTGCTTTATTGAAGAAGGAAGAAGAAAGGTCACTCGATAAGCTAAATAGGATGAAGAATCTCAAGTATGAAAAAGAGTTGGCAGATGGCAGGATAAGGGATGCAAACAAAGTCTTGAATGAGATGACTGAAAGTAAAATTGAAGCTCAGAATATCACAGGCAACACACTAATTAATGCTTACTACAAGTTTGGAGAATTGAAATCAGCTTTGAAATTTAAGAACAAGTTGTTAGAAGCTGGTCTAAAACATGATCCATTTACATATGAAGCATTAATTCATGGGTTCTACAAGACGAATGAACTAGAAAGGGCAAATGAGTTAATGATCAACATGGTTGATGCTGGATTTACACCCAGTTATTGCACATTCTCATGGATTGGAGATGGCTACAATAAGAAAGACAATATGGATGCAGTTTTAGCACTTCCAGATGATCAAGATGTTCTAGACTTGATGAGAATTGTTCAGAAGAACCGTGTTGTAGGTGCTACAGGTCTAAATGAGAGAAGCACTCGTTGTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTGTTAAAGGTTGTGTTGATGTTGTGGATTTGGCTGAATTGGACCAATGGGTGGCTGGAAGATTGATAGAAGATGTTTGGGAGATTGGGGTGGTAATGGAAGGAAAGGTGTTCACAAAAAATGGATTGCTTAAAAGCTGGAATCTGATTCTGGTGCAGGAAGAGGGAAAGAAGATTAGAGACAATGCTCTTAAGGTGAAGCAGACTGTGCAAGATGCAACTAGGCCTGAAGGACAAGCAGCACGGGATTTGAAGACTTTGATTGAAATAATTTCTACTACATCTTAA
>Glyma.09g146300.1.p sequence-type=predicted peptide transcript=Glyma.09g146300.1 locus=Glyma.09g146300 ID=Glyma.09g146300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSKKPIIYSVNCTPFKLHHPSALDMFDKIIDASKGKQFFMFLDYDDTLSPIVDDPDRAFMCDSMQRQELYYVGSHGMDIKGPTTTSKYNKDSKAEPILCQPASDFLPLIDEVYQQLVEKTKSTPGALVENNKLCLSVHFRCVDEKKWSELARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLEQKEMLRNELELMNKSLEESEAQLQSRTVESNELVSQIALLKKEEERSLDKLNRMKNLKYEKELADGRIRDANKVLNEMTESKIEAQNITGNTLINAYYKFGELKSALKFKNKLLEAGLKHDPFTYEALIHGFYKTNELERANELMINMVDAGFTPSYCTFSWIGDGYNKKDNMDAVLALPDDQDVLDLMRIVQKNRVVGATGLNERSTRCHSVLTVHVRGRELVSNSIVKGCVDVVDLAELDQWVAGRLIEDVWEIGVVMEGKVFTKNGLLKSWNLILVQEEGKKIRDNALKVKQTVQDATRPEGQAARDLKTLIEIISTTS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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