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Report for Sequence Feature Glyma.09G125000

Feature Type:gene_model
Chromosome:Gm09
Start:30852965
stop:30853429
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09G125000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G17250.1AT CCAAT-binding factor JGI N/AIEA
GO:0000462GO-bp maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0042254GO-bp ribosome biogenesis EnsemblGenomesN/AIEA
GO:0005730GO-cc nucleolus EnsemblGenomesN/AIEA
GO:0030692GO-cc Noc4p-Nop14p complex EnsemblGenomesN/AIEA
GO:0032040GO-cc small-subunit processome EnsemblGenomesN/AIEA
GO:0003690GO-mf double-stranded DNA binding EnsemblGenomesN/AIEA

Expression Patterns of Glyma.09G125000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09G125000 not represented in the dataset
Glyma.09G125000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.09G125000
>Glyma.09g125000.1 sequence-type=CDS polypeptide=Glyma.09g125000.1.p locus=Glyma.09g125000 ID=Glyma.09g125000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAGAAGAAAAAAGGACGATACGGCGTCGCAGAGCTGAAAACCCTAGGGAACCAGCTTCTCCCAACCTTCGTTTCCCCTTCTTCCCCTCCTCACCACGTCCTCGAATCCCTCCTCTCGCTCCACTCCTACTTCCTCCCTCTCCTCCCCAAGCTCCCTTCCCCCTCCGCCTCCGCCGCTCCCTCCGTCGTCGGCGACCAATCCGAGTTCAGCTACCTCTCGTGGCTCCGTTCCAAGTTCGACGAGTTCCTCAAGTCTCTCCTCGACGTCCTCGCTTCGCCGCAGGGAGATGAGACGCTCAAGGAACTTGTGTTGGACACGCTCATGGAGTTCGTAAAGGTCGCCAATGGCGGCACCTTCCACTCTTCTTTGTACCGCAAGCTTCTTCATAGTATTGTACGTTATGCCAATTTTGCTGATAATTCTCATTGCCATTTTTTTTATTTGATTTGGTTGATTTTGGATTGA
Predicted protein sequences of Glyma.09G125000
>Glyma.09g125000.1.p sequence-type=predicted peptide transcript=Glyma.09g125000.1 locus=Glyma.09g125000 ID=Glyma.09g125000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
KKKKGRYGVAELKTLGNQLLPTFVSPSSPPHHVLESLLSLHSYFLPLLPKLPSPSASAAPSVVGDQSEFSYLSWLRSKFDEFLKSLLDVLASPQGDETLKELVLDTLMEFVKVANGGTFHSSLYRKLLHSIVRYANFADNSHCHFFYLIWLILD*






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