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Report for Sequence Feature Glyma.08g367100

Feature Type:gene_model
Chromosome:Gm08
Start:47766869
stop:47772423
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g367100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16150.1AT plastidic GLC translocator JGI N/AIEA
GO:0046323GO-bp glucose import EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:1902600GO-bp proton transmembrane transport EnsemblGenomesN/AIEA
GO:1904659GO-bp glucose transmembrane transport EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0005215GO-mf transporter activity EnsemblGenomesN/AIEA
GO:0005351GO-mf carbohydrate:proton symporter activity EnsemblGenomesN/AIEA
GO:0005355GO-mf glucose transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0022857GO-mf transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0022857GO-mf transmembrane transporter activity JGI N/AIEA
KOG0254 KOG Predicted transporter (major facilitator superfamily) JGI N/AIEA
PTHR24063Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24063:SF84Panther JGI N/AIEA
PF00083PFAM Sugar (and other) transporter JGI N/AIEA

Expression Patterns of Glyma.08g367100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g367100 not represented in the dataset
Glyma.08g367100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.08g367100
ParalogEvidenceComments
Glyma.18g295300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g367100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g48255 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g367100
>Glyma.08g367100.1 sequence-type=CDS polypeptide=Glyma.08g367100.1.p locus=Glyma.08g367100 ID=Glyma.08g367100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAACATCATGAGTAGTAGTAGAAGCAGAGGCAGCTGGTGCGGTTTGTGGCCTGGTTCCTTCAATATGGAAACTGAGTTGACTATTAGAGGAAAGAGTTTTGGTGGCATTTTTGGCTCCTCTGCTAAGCCTAGATCACTCAGGGTTCAGTCTTCTGATGAAGATGTTGAGGATCTTGTCCCCTCTAATATTTCGGGCAAACCTTCTGGAACTGTTCTGCCCTATGTTGGTGTTGCTTGCCTTGGAGCCATGTTATTTGGTTATCATCTTGGGGTGGTAAATGGTTCTCTTGAGTACCTTGCCAAGGATCTTGGAATCACCCAAAACACTGTTATACAAGGATGGATTGTCAGTGCACTGCTTGCTGGTGCTACTGTTGGTTCATTTACCGGTGGAGCATTGGCTGACAAATTTGGCCGGACTAGGACTTTTCAGTTGGATGCAATCCCTTTAGCAATTGGAGGATTTCTTTGTGCTACTGCTCAGAGTGTTCAGACAATGATCATCGGTCGCTTGCTAGCTGGCATAGGAATTGGCATAACATCTGCAGTTGTACCACTTTACATATCTGAGATTTCTCCAACCGAAATTCGGGGTGCACTTGGATCCGTTAATCAACTTTTTATATGTATTGGAATTCTTGCAGCACTACTGGCTGGTTTGCCTCTGGTGGGAAATCCTATATGGTGGCGGACAATGTTTGGAATTACTGTAGTTCCATCTGTTCTGTTAGCACTTGGAATGACTATCTCTCCAGAAAGTCCTCGGTGGCTCTTTCAGCAAGGAAAAATATCTGAAGCTGAAAAGGCTGTTAAAACACTATATGGAAAAGAAAGAGTGGCTTTGGTTATGCATGACTTGACAGCAGCAAGTGAAGGTTCTTCTGAACCTGAAGCAGGATGGTTTGATCTGTTTAGTAGTCGGTATAGGAAAGTGGTCAGTGTAGGGGCAACACTTTTCTTGCTCCAGCAATTGGCAGGAATAAATGCAGTGGTCTATTATTCAACTTCTGTTTTCCGCAGTGCTGGAATTGCTTCTGATGTTGCAGCAAGTGCACTGGTTGGTGCATCAAATGTTTTTGGCACAATTGTTGCTTCGTCCTTGATGGACAAAAAAGGAAGGAAACGTCTCCTTATCACAAGCTTTAGTGGGATGGCTGCTTCTATGTTGCTTCTTTTCGTGTCTTTCACTTGGAAGGTCCTTGCTCCATACTCTGGCACCCTTGCAGTCCTTGGGACTGTCCTCTATGTCCTATCATTCTCTCTTGGTGCTGGTCCTGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCAAGAATCAGAGCAAAAGCAATTTCTTTGTCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGGCTCTATTTCTTGAGTGTAGTTAACAAGTTTGGTATCAGCATAGTGTACTTGGGCTTCTCAATTGTCTGTCTTCTCACTGTTGTGTACATAGCTCGTAACGTTGTGGAAACAAAAGGTCGATCGTTGGAAGAAATAGAACGTGCACTTAGTCCTGCAACATAA
Predicted protein sequences of Glyma.08g367100
>Glyma.08g367100.1.p sequence-type=predicted peptide transcript=Glyma.08g367100.1 locus=Glyma.08g367100 ID=Glyma.08g367100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNIMSSSRSRGSWCGLWPGSFNMETELTIRGKSFGGIFGSSAKPRSLRVQSSDEDVEDLVPSNISGKPSGTVLPYVGVACLGAMLFGYHLGVVNGSLEYLAKDLGITQNTVIQGWIVSALLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGGFLCATAQSVQTMIIGRLLAGIGIGITSAVVPLYISEISPTEIRGALGSVNQLFICIGILAALLAGLPLVGNPIWWRTMFGITVVPSVLLALGMTISPESPRWLFQQGKISEAEKAVKTLYGKERVALVMHDLTAASEGSSEPEAGWFDLFSSRYRKVVSVGATLFLLQQLAGINAVVYYSTSVFRSAGIASDVAASALVGASNVFGTIVASSLMDKKGRKRLLITSFSGMAASMLLLFVSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAISLSLGTHWISNFVIGLYFLSVVNKFGISIVYLGFSIVCLLTVVYIARNVVETKGRSLEEIERALSPAT*






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