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Report for Sequence Feature Glyma.08g349500

Feature Type:gene_model
Chromosome:Gm08
Start:45743711
stop:45749060
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g349500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25070.1AT RIN4 JGI N/AIEA
K13456KEGG Plant-pathogen interaction JGI N/AIEA
PTHR33159PantherFam RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN JGI N/AIEA
PTHR33159:SF6PantherFam RPM1-INTERACTING PROTEIN 4 JGI N/AIEA
PF05627Pfam Cleavage site for pathogenic type III effector avirulence factor Avr JGI N/AIEA

Proteins Associated with Glyma.08g349500
LocusGene SymbolProtein Name
RIN4d RIN4d protein

Gene model name correspondences to Glyma.08g349500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g46400 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g349500
>Glyma.08g349500.2 sequence-type=CDS polypeptide=Glyma.08g349500.2.p locus=Glyma.08g349500 id=Glyma.08g349500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCAACATTCTAATGTTCCAAAGTTTGGCAATCAGGAGAGTGAAGACAACGTTTTAGACACAGCTCATTCTGACAAAGCCCAGAAAGGTCAGTCTGGTTCAAAGATGATTAATCCAAATGACACCAAGGAAAATTCGGACATAGTTTCTTCTGCTGACCTACCCCATTCAAAACCCAGAGTTCATTCAGAGGATCCATCTGGAAAGGGATCAGTGAGAACAACACATGAGTTACAAAAGAGTAGGGAGGATGGTGATCCTAAACAATTTACTGACTCTCCAGCTCGCCATGGTGGCGGTGATTCTTCCCATCGAGGTCATGGAGTAGGTTCTGCTGACAACCGTAAAAGACCTTCAAGACAAAGTACTGGGCCTGAGCACAACATTGACCGTTCACCCCTTCATCGCCAGGCAAAAACCCCTGGCAGAGATAGTCCTTCTTGGGAAGGAAAAAATTCATATGATAGCAGCCATGGTACCCCAGGAAGGTCCCGATTGAGACCATCTTACCGAGGGGATGAAACTCCTGATGAAGGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAGCAACCCTGCATCAGCTGATGGCTACACTCACATTTTCAACAAAGTGCGGGAAGAGAAACAAGTGGGGGCTGGACACGTGCCAGGCACACCTAATGGGAGACAATATGCTGCTCGGAATCAACGTGCCAACGACAAAGCTCAGAGTTGCTGCTTTTGCTGGGGCAAAAAATGA

>Glyma.08g349500.3 sequence-type=CDS polypeptide=Glyma.08g349500.3.p locus=Glyma.08g349500 id=Glyma.08g349500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGAGAGTGAAGACAACGTTTTAGACACAGCTCATTCTGACAAAGCCCAGAAAGGTCAGTCTGGTTCAAAGATGATTAATCCAAATGACACCAAGGAAAATTCGGACATAGTTTCTTCTGCTGACCTACCCCATTCAAAACCCAGAGTTCATTCAGAGGATCCATCTGGAAAGGGATCAGTGAGAACAACACATGAGTTACAAAAGAGTAGGGAGGATGGTGATCCTAAACAATTTACTGACTCTCCAGCTCGCCATGGTGGCGGTGATTCTTCCCATCGAGGTCATGGAGTAGGTTCTGCTGACAACCGTAAAAGACCTTCAAGACAAAGTACTGGGCCTGAGCACAACATTGACCGTTCACCCCTTCATCGCCAGGCAAAAACCCCTGGCAGAGATAGTCCTTCTTGGGAAGGAAAAAATTCATATGATAGCAGCCATGGTACCCCAGGAAGGTCCCGATTGAGACCATCTTACCGAGGGGATGAAACTCCTGATGAAGGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAGCAACCCTGCATCAGCTGATGGCTACACTCACATTTTCAACAAAGTGCGGGAAGAGAAACAAGTGGGGGCTGGACACGTGCCAGGCACACCTAATGGGAGACAATATGCTGCTCGGAATCAACGTGCCAACGACAAAGCTCAGAGTTGCTGCTTTTGCTGGGGCAAAAAATGA
Predicted protein sequences of Glyma.08g349500
>Glyma.08g349500.2.p sequence-type=predicted peptide transcript=Glyma.08g349500.2 locus=Glyma.08g349500 id=Glyma.08g349500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQHSNVPKFGNQESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIVSSADLPHSKPRVHSEDPSGKGSVRTTHELQKSREDGDPKQFTDSPARHGGGDSSHRGHGVGSADNRKRPSRQSTGPEHNIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRPSYRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDKAQSCCFCWGKK*

>Glyma.08g349500.3.p sequence-type=predicted peptide transcript=Glyma.08g349500.3 locus=Glyma.08g349500 id=Glyma.08g349500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIVSSADLPHSKPRVHSEDPSGKGSVRTTHELQKSREDGDPKQFTDSPARHGGGDSSHRGHGVGSADNRKRPSRQSTGPEHNIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRPSYRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDKAQSCCFCWGKK*






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