Glyma.08g345900

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Report for Sequence Feature Glyma.08g345900

Feature Type:	gene_model
Chromosome:	Gm08
Start:	46076396
stop:	46082325
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g345900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G05990.1	AT	NAD(P)-binding Rossmann-fold superfamily protein	JGI	N/A	IEA
KOG0725	KOG	Reductases with broad range of substrate specificities	JGI	N/A	IEA
FASYN-ELONG-PWY	SoyCyc9	fatty acid elongation -- saturated	Plant Metabolic Network		ISS
PWY-5156	SoyCyc9	superpathway of fatty acid biosynthesis II (plant)	Plant Metabolic Network		ISS
PWY-5971	SoyCyc9	palmitate biosynthesis II (bacteria and plants)	Plant Metabolic Network		ISS
PWY-5973	SoyCyc9	cis-vaccenate biosynthesis	Plant Metabolic Network		ISS
PWY-5989	SoyCyc9	stearate biosynthesis II (bacteria and plants)	Plant Metabolic Network		ISS
GN7V-40755	SoyCyc9-rxn	enoyl-[acyl-carrier-protein] reductase (NADH)	Plant Metabolic Network		ISS

Expression Patterns of Glyma.08g345900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.08g345900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g45990	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g345900

Limit To All Plant Sequences

>Glyma.08g345900.2 sequence-type=transcript locus=Glyma.08g345900 ID=Glyma.08g345900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCCACTTTCTCTGGCCACCTTCTTGTTCTTGTTTGTTTGGTCTCTACAAGGCGAGATCTAGGTTCTCTGCATCATTTTTCATTTGGACAAGATGGCAACAACAGTTTCCAACTTGCCAACTGCTATGTCAAGACCCAAGATTCCTTCATCACAAAGGATTGCAAATGTAGGTCCTGCACTTCTTGGAGCCAGATCTAAGGTTGGTTCATGTTATAAACTGGCAAGTGTTTGTCATGTTGCGTCAGCACAACCTTTCCAGCAGGGGTTGACAATGACATCAGGTGCTGTAAAATATGACAAAATCATAACAAAGGCAATGTCCGAGTCTAGTTCAAACAAGGAAGTTGCAGGATTGCCAATTGATTTGAAAGGTAAAAGGGCTTTCATTGCTGGTGTGGCTGATGACAATGGATATGGCTGGGCAATAGCAAAATCTCTTGCAGCAGCAGGAGCTGAAATTCTTGTCGGCACATGGGTACCTGCTTTAAATATATTTGAGTCCAGTCTACGACGTGGAAAATTTGACGAGTCACGCAAATTACAAGATGGTTCATTGATGGAGATTGCTAAAGTGTATCCTTTGGATGCAGTATATGACAGTCCTGAAGATGTCCCGGAAGATGTGAAAGCTAACAAGCGCTATGCTGGAGCCACAAATTGGACTGTACAGGAAGTTGCTGAATCTGTCAAGAAGGATTTTGGCACTATCGACATACTTGTGCACTCGCTTGCTAATGGACCAGAGGTCAGCAAACTATTGTCCGAGACATCTCGGAAAGGATATCTTGCTGCCCTGTCTGCATCAAGTTACTCTTATATTTCTTTACTCAAACACTTTCTTCCAATCATGAACCCAGATGGATCTGCAATTTCTCTTACATACATTGCTTCAGAAAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCTTTAGAAAGTGATACAAGAGTGCTTGCTTTTGAAGCTGGTAGAAAGAAAAGAATCAGAGTCAATACTATATCTGCAGGTCCATTGGGAAGCCGTGCAGCAAAAGCAATTGGCTTCATTGACATGATGATTGACTATTCGTTTACCAATGCACCACTGCAGAAAGAACTACATGCTGAGGAGGTTGGCAACACTGCTGCTTTCTTGTCATCACCCTTGGCATCAGCTATCACAGGTGCTGTTATATATGTTGACAATGGTCTAAACGCCATGGGGGTTGGAGTTGACAGTCCAATATTTAAAGAACTTGACATTCCAAAAGAGCATCATTGAAGTGCATAGTATATCTCTACACCAACTAAAGATTTATACGGCCTAGTATGATGAAAAAAAGCTGAGGAAGTTAGTTTTTGCAATTTCATAAATTAGTAAACGGTTGTTTGAACTTTGCTACCATTGATTTTCATTAATTACTATCCACTTTTCATTATCCTCTACAAAGTGTATCTTAACCATTTGAAGAGTTATTTATACCTTGAGGTTAAATTATTTTAGTTCTTAAAAAAAAATTAAATAGTTTTGTTG

Coding sequences of Glyma.08g345900

Limit To All Plant Sequences

>Glyma.08g345900.1 sequence-type=CDS polypeptide=Glyma.08g345900.1.p locus=Glyma.08g345900 ID=Glyma.08g345900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAACAACAGTTTCCAACTTGCCAACTGCTATGTCAAGACCCAAGATTCCTTCATCACAAAGGATTGCAAATGTAGGTCCTGCACTTCTTGGAGCCAGATCTAAGGTTGGTTCATGTTATAAACTGGCAAGTGTTTGTCATGTTGCGTCAGCACAACCTTTCCAGCAGGGGTTGACAATGACATCAGGTGCTGTAAAATATGACAAAATCATAACAAAGGCAATGTCCGAGTCTAGTTCAAACAAGGAAGTTGCAGGATTGCCAATTGATTTGAAAGGTAAAAGGGCTTTCATTGCTGGTGTGGCTGATGACAATGGATATGGCTGGGCAATAGCAAAATCTCTTGCAGCAGCAGGAGCTGAAATTCTTGTCGGCACATGGGTACCTGCTTTAAATATATTTGAGTCCAGTCTACGACGTGGAAAATTTGACGAGTCACGCAAATTACAAGATGGTTCATTGATGGAGATTGCTAAAGTGTATCCTTTGGATGCAGTATATGACAGTCCTGAAGATGTCCCGGAAGATGTGAAAGCTAACAAGCGCTATGCTGGAGCCACAAATTGGACTGTACAGGAAGTTGCTGAATCTGTCAAGAAGGATTTTGGCACTATCGACATACTTGTGCACTCGCTTGCTAATGGACCAGAGGTCAGCAAACTATTGTCCGAGACATCTCGGAAAGGATATCTTGCTGCCCTGTCTGCATCAAGTTACTCTTATATTTCTTTACTCAAACACTTTCTTCCAATCATGAACCCAGATGGATCTGCAATTTCTCTTACATACATTGCTTCAGAAAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCTTTAGAAAGTGATACAAGAGTGCTTGCTTTTGAAGCTGGTAGAAAGAAAAGAATCAGAGTCAATACTATATCTGCAGGTCCATTGGGAAGCCGTGCAGCAAAAGCAATTGGCTTCATTGACATGATGATTGACTATTCGTTTACCAATGCACCACTGCAGAAAGAACTACATGCTGAGGAGGTTGGCAACACTGCTGCTTTCTTGTCATCACCCTTGGCATCAGCTATCACAGGTGCTGTTATATATGTTGACAATGGTCTAAACGCCATGGGGGTTGGAGTTGACAGTCCAATATTTAAAGAACTTGACATTCCAAAAGAGCATCATTGA

>Glyma.08g345900.2 sequence-type=CDS polypeptide=Glyma.08g345900.2.p locus=Glyma.08g345900 ID=Glyma.08g345900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAACAACAGTTTCCAACTTGCCAACTGCTATGTCAAGACCCAAGATTCCTTCATCACAAAGGATTGCAAATGTAGGTCCTGCACTTCTTGGAGCCAGATCTAAGGTTGGTTCATGTTATAAACTGGCAAGTGTTTGTCATGTTGCGTCAGCACAACCTTTCCAGCAGGGGTTGACAATGACATCAGGTGCTGTAAAATATGACAAAATCATAACAAAGGCAATGTCCGAGTCTAGTTCAAACAAGGAAGTTGCAGGATTGCCAATTGATTTGAAAGGTAAAAGGGCTTTCATTGCTGGTGTGGCTGATGACAATGGATATGGCTGGGCAATAGCAAAATCTCTTGCAGCAGCAGGAGCTGAAATTCTTGTCGGCACATGGGTACCTGCTTTAAATATATTTGAGTCCAGTCTACGACGTGGAAAATTTGACGAGTCACGCAAATTACAAGATGGTTCATTGATGGAGATTGCTAAAGTGTATCCTTTGGATGCAGTATATGACAGTCCTGAAGATGTCCCGGAAGATGTGAAAGCTAACAAGCGCTATGCTGGAGCCACAAATTGGACTGTACAGGAAGTTGCTGAATCTGTCAAGAAGGATTTTGGCACTATCGACATACTTGTGCACTCGCTTGCTAATGGACCAGAGGTCAGCAAACTATTGTCCGAGACATCTCGGAAAGGATATCTTGCTGCCCTGTCTGCATCAAGTTACTCTTATATTTCTTTACTCAAACACTTTCTTCCAATCATGAACCCAGATGGATCTGCAATTTCTCTTACATACATTGCTTCAGAAAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCTTTAGAAAGTGATACAAGAGTGCTTGCTTTTGAAGCTGGTAGAAAGAAAAGAATCAGAGTCAATACTATATCTGCAGGTCCATTGGGAAGCCGTGCAGCAAAAGCAATTGGCTTCATTGACATGATGATTGACTATTCGTTTACCAATGCACCACTGCAGAAAGAACTACATGCTGAGGAGGTTGGCAACACTGCTGCTTTCTTGTCATCACCCTTGGCATCAGCTATCACAGGTGCTGTTATATATGTTGACAATGGTCTAAACGCCATGGGGGTTGGAGTTGACAGTCCAATATTTAAAGAACTTGACATTCCAAAAGAGCATCATTGA

Predicted protein sequences of Glyma.08g345900

Limit To All Plant Sequences

>Glyma.08g345900.1.p sequence-type=predicted peptide transcript=Glyma.08g345900.1 locus=Glyma.08g345900 ID=Glyma.08g345900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATTVSNLPTAMSRPKIPSSQRIANVGPALLGARSKVGSCYKLASVCHVASAQPFQQGLTMTSGAVKYDKIITKAMSESSSNKEVAGLPIDLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRKLQDGSLMEIAKVYPLDAVYDSPEDVPEDVKANKRYAGATNWTVQEVAESVKKDFGTIDILVHSLANGPEVSKLLSETSRKGYLAALSASSYSYISLLKHFLPIMNPDGSAISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKKRIRVNTISAGPLGSRAAKAIGFIDMMIDYSFTNAPLQKELHAEEVGNTAAFLSSPLASAITGAVIYVDNGLNAMGVGVDSPIFKELDIPKEHH*

>Glyma.08g345900.2.p sequence-type=predicted peptide transcript=Glyma.08g345900.2 locus=Glyma.08g345900 ID=Glyma.08g345900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATTVSNLPTAMSRPKIPSSQRIANVGPALLGARSKVGSCYKLASVCHVASAQPFQQGLTMTSGAVKYDKIITKAMSESSSNKEVAGLPIDLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRKLQDGSLMEIAKVYPLDAVYDSPEDVPEDVKANKRYAGATNWTVQEVAESVKKDFGTIDILVHSLANGPEVSKLLSETSRKGYLAALSASSYSYISLLKHFLPIMNPDGSAISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKKRIRVNTISAGPLGSRAAKAIGFIDMMIDYSFTNAPLQKELHAEEVGNTAAFLSSPLASAITGAVIYVDNGLNAMGVGVDSPIFKELDIPKEHH*

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