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Report for Sequence Feature Glyma.08g345600

Feature Type:gene_model
Chromosome:Gm08
Start:46051099
stop:46055877
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g345600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G48545.1AT histidine triad nucleotide-binding 3 JGI N/AIEA
GO:0006790GO-bp sulfur compound metabolic process EnsemblGenomesN/AIEA
GO:0009150GO-bp purine ribonucleotide metabolic process EnsemblGenomesN/AIEA
GO:0005777GO-cc peroxisome EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0047627GO-mf adenylylsulfatase activity EnsemblGenomesN/AIEA
KOG3275 KOG Zinc-binding protein of the histidine triad (HIT) family JGI N/AIEA
PTHR23089Panther HISTIDINE TRIAD (HIT) PROTEIN JGI N/AIEA
PF01230PFAM HIT domain JGI N/AIEA
GN7V-66553SoyCyc9-rxn adenylylsulfatase Plant Metabolic Network ISS

Expression Patterns of Glyma.08g345600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g345600 not represented in the dataset
Glyma.08g345600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g345600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g45960 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g345600
>Glyma.08g345600.1 sequence-type=CDS polypeptide=Glyma.08g345600.1.p locus=Glyma.08g345600 ID=Glyma.08g345600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGTTGAAGCCAGACGACTTGCCGTTTTGTGCGCCCACCTCAACCCGACCCGCTTACTACCGGACCCTCCCTCTAGTCCACGGGTTTCTCTTACGGGTTCGGCCTGTGCTTCTGATTCTGATACCCAAAACCACACTTTGCAAAACGATTGCGTTTTCTGCAAGATTATCCGTGACCAATCACCAGCTGTCAAGCTTTATGAAGATGACATGTGCCTCTGCATATTGGATACAAGTCCACTGAGTCATGGGCACTCTCTCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAGTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATGAAGGCTACTGGCTGCAGTTCATTCAACCTGTTGGTCAACAATGGGGCAGCTGCAGGCCAAGTAATATATCATACGCATATGCACATAATTCCTCGTAAAGCATATGATTGCTTATGGGCTTCTGAGAGTTTGCTAAGGCGACGCCTTAATTTAGAGGATGAGAAAGTTTCTCAGCTTGCAGCTCGTATTCAGAAGCAGTTATTGCCATCCGACATTTGCCAGGACAGCAAGAATGAAAGTTTTTGTTCAAGTAAAAGTTAG
Predicted protein sequences of Glyma.08g345600
>Glyma.08g345600.1.p sequence-type=predicted peptide transcript=Glyma.08g345600.1 locus=Glyma.08g345600 ID=Glyma.08g345600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSVEARRLAVLCAHLNPTRLLPDPPSSPRVSLTGSACASDSDTQNHTLQNDCVFCKIIRDQSPAVKLYEDDMCLCILDTSPLSHGHSLIIPKSHFPSLDATPPSVVAAMCSKVPFISNAIMKATGCSSFNLLVNNGAAAGQVIYHTHMHIIPRKAYDCLWASESLLRRRLNLEDEKVSQLAARIQKQLLPSDICQDSKNESFCSSKS*






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