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Report for Sequence Feature Glyma.08g344000

Feature Type:gene_model
Chromosome:Gm08
Start:45909669
stop:45913364
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g344000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25410.1AT Sodium Bile acid symporter family JGI N/AIEA
GO:0006814GO-bp sodium ion transport JGI N/AIEA
GO:0009941GO-cc chloroplast envelope EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0008508GO-mf bile acid:sodium symporter activity JGI N/AIEA
KOG2718 KOG Na+-bile acid cotransporter JGI N/AIEA
PTHR10361Panther SODIUM-BILE ACID COTRANSPORTER JGI N/AIEA
PTHR10361:SF0Panther JGI N/AIEA
PF01758PFAM Sodium Bile acid symporter family JGI N/AIEA

Expression Patterns of Glyma.08g344000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g344000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g45790 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g344000
>Glyma.08g344000.2 sequence-type=transcript locus=Glyma.08g344000 ID=Glyma.08g344000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCCCCCAACCCCAACCCCAACCAACTCAGCCACTCATTCACAGCCGTGTATCACTCAAATAATAAGTATTTGATTCTACACAATCAAACACAGCCATCACTGTCTCTCTCCAACTTTCACTTTCGCATACCTTCACTTCATATAATATGCCAAACTCTTTCCATAACCTCATCTTCTCTTCTCACAACACGTTCCCATTCCTCTCTCCCTAACCTCACCGGCAGCGCCTTCACGGTCATCGCCGCCGACACCCCCCCTCCCTTCTTAATGGCCTCAATCCCAGTCGCGTGTTCCACACACCCCAGGCTCCAAGCCTCACCCTTATTCCAATCCCACGCGCGCTCCCGCAGCGCGTCCTTCTGGAGGGTTCAGCAGAGGGGTTCGATGGGTGGTGGTGGTGCCGCGTCGAGTTTCGCCTGCTCCACTTCTCAGTTCCGCGGCGGATTCGGGTTCCGGTTCCACCGGAGACAGGGGAAGTTCTCGTTGCTCTCTTTCGGCGGTGACGACGACGGAAGCGCCGTTGGCGGCGAAGCGAGAGAAAGAGACTTGTCTCAGCTTCTCTCCGCATTGCTTCCCGTTGTTGTTGCTGCCACCGCCGTTGCCGCTCTCGCTAAACCCTCCACTTTTACTTGGGTATCAAAAGAGTTATATGCTCCTGCACTTGGTGGGATTATGTTGTCTATTGGAATAAGACTATCCGTAGATGACTTCGCTCTTGCATTTAAAAGACCTTTGCCACTTACCATTGGGTTAATTGCGCAATACGTGCTTAAGCCTGTTCTTGGAATCTTGGTTGCAAAGGCTTTTGGTTTGTCTAGGATGTTTTACGCGGGCTTTGTCCTCACAGCTTGTGTTTCGGGGGCTCAACTATCCAGCTATGCAAACTTCTTAAGCAAAGGGGATGTAGCCTTGGGCATTCTTCTCACAAGCTATACCACAATTGCATCAGTTATTGTTACACCTCTGTTAACTGGTCTTCTGATTGGATCAGTAGTGCCAGTTGATGCAGTTGCCATGTCAAAGTCAATTCTGCAGGTTGTACTTGTTCCGGTGACCCTTGGTCTTCTTCTCAATACATATGCAAAGTCAGTTGTATCTGTTCTTCAACCTGTGATGCCCTTTGTTGCCATGATTTGTACTTCACTGTGCATTGGCAGCCCTCTTGCTTTAAACAGGAGTCAAATTTTGACAGGCGAAGGTCTCCGGTTGGTTTTTCCAGTATTAACATTTCATGTTGTTGCCTTCACTTTAGGATATTGGTTCTCAAAGATTCCATCCTTGAGGAAGAACAGGTGAGCAGGACGATTTCACTATGCACTGGAATGCAGAGTTCCACCCTTGCAGGACTCCTTGCAACGCAATTTTTGGATAGTAGTCAGGCAGTTCCTCCTGCATGTTCTGTCATTGCTATGGCTATAATGGGTCTCTGTCTTGCCTCTTTTTGGGGAAGTGGCTTTGTAATTAGAAACCTGTTGCCATTACCTCCTCTCAGAACCAATTCTGCTGTTAAAACTTAACTTTTTTGTTTCTGATGCGTGTCATTGAGGCTTATTTTTTAGCATCAGTTGGAGGGTGGAAACTTGATAAATTTGATCTTTTAATGGTAACAATTAGAAATGGCTAGGGAAGGTAGATTAATAGGAAAAATTCAAGTGTATAGGTTAGTCACATACAAATCAGCAAGAAACAGGTTTCATTAGTAACATTGTAACATTATCCAGAGAAAAAAGTTACATAGTAACGGGGGGTATAGATGCATAGATACTATCATTTGTTACCTAGCTGCAAATCAGTACACTTCTGTACATAGACTCAAACTATGTCATAGATCATTTACCAATTAACAGTTTTCTCTGTCCCTCTCTGCGTTTCTTCCATTGTGTGAACCTGTGATCTTCAAACGAATGTAGTAGCCAAACTCTTCTTCATTTTGCAGGGAATGCTCATTTTTATG

>Glyma.08g344000.3 sequence-type=transcript locus=Glyma.08g344000 ID=Glyma.08g344000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCCCCCAACCCCAACCCCAACCAACTCAGCCACTCATTCACAGCCGTGTATCACTCAAATAATAAGTATTTGATTCTACACAATCAAACACAGCCATCACTGTCTCTCTCCAACTTTCACTTTCGCATACCTTCACTTCATATAATATGCCAAACTCTTTCCATAACCTCATCTTCTCTTCTCACAACACGTTCCCATTCCTCTCTCCCTAACCTCACCGGCAGCGCCTTCACGGTCATCGCCGCCGACACCCCCCCTCCCTTCTTAATGGCCTCAATCCCAGTCGCGTGTTCCACACACCCCAGGCTCCAAGCCTCACCCTTATTCCAATCCCACGCGCGCTCCCGCAGCGCGTCCTTCTGGAGGGTTCAGCAGAGGGGTTCGATGGGTGGTGGTGGTGCCGCGTCGAGTTTCGCCTGCTCCACTTCTCAGTTCCGCGGCGGATTCGGGTTCCGGTTCCACCGGAGACAGGGGAAGTTCTCGTTGCTCTCTTTCGGCGGTGACGACGACGGAAGCGCCGTTGGCGGCGAAGCGAGAGAAAGAGACTTGTCTCAGCTTCTCTCCGCATTGCTTCCCGTTGTTGTTGCTGCCACCGCCGTTGCCGCTCTCGCTAAACCCTCCACTTTTACTTGGGTATCAAAAGAGTTATATGCTCCTGCACTTGGTGGGATTATGTTGTCTATTGGAATAAGACTATCCGTAGATGACTTCGCTCTTGCATTTAAAAGACCTTTGCCACTTACCATTGGGTTAATTGCGCAATACGTGCTTAAGCCTGTTCTTGGAATCTTGGTTGCAAAGGCTTTTGGTTTGTCTAGGATGTTTTACGCGGGCTTTGTCCTCACAGCTTGTGTTTCGGGGGCTCAACTATCCAGCTATGCAAACTTCTTAAGCAAAGGGGATGTAGCCTTGGGCATTCTTCTCACAAGCTATACCACAATTGCATCAGTTATTGTTACACCTCTGTTAACTGGTCTTCTGATTGGATCAGTAGTGCCAGTTGATGCAGTTGCCATGTCAAAGTCAATTCTGCAGGTTGTACTTGTTCCGGTGACCCTTGGTCTTCTTCTCAATACATATGCAAAGTCAGTTGTATCTGTTCTTCAACCTGTGATGCCCTTTGTTGCCATGATTTGTACTTCACTGTGCATTGGCAGCCCTCTTGCTTTAAACAGGAGTCAAATTTTGACAGGCGAAGGCAGGAAGAACAGGTGAGCAGGACGATTTCACTATGCACTGGAATGCAGAGTTCCACCCTTGCAGGACTCCTTGCAACGCAATTTTTGGATAGTAGTCAGGCAGTTCCTCCTGCATGTTCTGTCATTGCTATGGCTATAATGGGTCTCTGTCTTGCCTCTTTTTGGGGAAGTGGCTTTGTAATTAGAAACCTGTTGCCATTACCTCCTCTCAGAACCAATTCTGCTGTTAAAACTTAACTTTTTTGTTTCTGATGCGTGTCATTGAGGCTTATTTTTTAGCATCAGTTGGAGGGTGGAAACTTGATAAATTTGATCTTTTAATGGTAACAATTAGAAATGGCTAGGGAAGGTAGATTAATAGGAAAAATTCAAGTGTATAGGTTAGTCACATACAAATCAGCAAGAAACAGGTTTCATTAGTAACATTGTAACATTATCCAGAGAAAAAAGTTACATAGTAACGGGGGGTATAGATGCATAGATACTATCATTTGTTACCTAGCTGCAAATCAGTACACTTCTGTACATAGACTCAAACTATGTCATAGATCATTTACCAATTAACAGTTTTCTCTGTCCCTCTCTGCGTTTCTTCCATTGTGTGAACCTGTGATCTTCAAACGAATGTAGTAGCCAAACTCTTCTTCATTTTGCAGGGAATGCTCATTTTTATG
Coding sequences of Glyma.08g344000
>Glyma.08g344000.1 sequence-type=CDS polypeptide=Glyma.08g344000.1.p locus=Glyma.08g344000 ID=Glyma.08g344000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCTCAATCCCAGTCGCGTGTTCCACACACCCCAGGCTCCAAGCCTCACCCTTATTCCAATCCCACGCGCGCTCCCGCAGCGCGTCCTTCTGGAGGGTTCAGCAGAGGGGTTCGATGGGTGGTGGTGGTGCCGCGTCGAGTTTCGCCTGCTCCACTTCTCAGTTCCGCGGCGGATTCGGGTTCCGGTTCCACCGGAGACAGGGGAAGTTCTCGTTGCTCTCTTTCGGCGGTGACGACGACGGAAGCGCCGTTGGCGGCGAAGCGAGAGAAAGAGACTTGTCTCAGCTTCTCTCCGCATTGCTTCCCGTTGTTGTTGCTGCCACCGCCGTTGCCGCTCTCGCTAAACCCTCCACTTTTACTTGGGTATCAAAAGAGTTATATGCTCCTGCACTTGGTGGGATTATGTTGTCTATTGGAATAAGACTATCCGTAGATGACTTCGCTCTTGCATTTAAAAGACCTTTGCCACTTACCATTGGGTTAATTGCGCAATACGTGCTTAAGCCTGTTCTTGGAATCTTGGTTGCAAAGGCTTTTGGTTTGTCTAGGATGTTTTACGCGGGCTTTGTCCTCACAGCTTGTGTTTCGGGGGCTCAACTATCCAGCTATGCAAACTTCTTAAGCAAAGGGGATGTAGCCTTGGGCATTCTTCTCACAAGCTATACCACAATTGCATCAGTTATTGTTACACCTCTGTTAACTGGTCTTCTGATTGGATCAGTAGTGCCAGTTGATGCAGTTGCCATGTCAAAGTCAATTCTGCAGGTTGTACTTGTTCCGGTGACCCTTGGTCTTCTTCTCAATACATATGCAAAGTCAGTTGTATCTGTTCTTCAACCTGTGATGCCCTTTGTTGCCATGATTTGTACTTCACTGTGCATTGGCAGCCCTCTTGCTTTAAACAGGAGTCAAATTTTGACAGGCGAAGGTCTCCGGTTGGTTTTTCCAGTATTAACATTTCATGTTGTTGCCTTCACTTTAGGATATTGGTTCTCAAAGATTCCATCCTTGAGGCAGGAAGAACAGGTGAGCAGGACGATTTCACTATGCACTGGAATGCAGAGTTCCACCCTTGCAGGACTCCTTGCAACGCAATTTTTGGATAGTAGTCAGGCAGTTCCTCCTGCATGTTCTGTCATTGCTATGGCTATAATGGGTCTCTGTCTTGCCTCTTTTTGGGGAAGTGGCTTTGTAATTAGAAACCTGTTGCCATTACCTCCTCTCAGAACCAATTCTGCTGTTAAAACTTAA

>Glyma.08g344000.2 sequence-type=CDS polypeptide=Glyma.08g344000.2.p locus=Glyma.08g344000 ID=Glyma.08g344000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCTCAATCCCAGTCGCGTGTTCCACACACCCCAGGCTCCAAGCCTCACCCTTATTCCAATCCCACGCGCGCTCCCGCAGCGCGTCCTTCTGGAGGGTTCAGCAGAGGGGTTCGATGGGTGGTGGTGGTGCCGCGTCGAGTTTCGCCTGCTCCACTTCTCAGTTCCGCGGCGGATTCGGGTTCCGGTTCCACCGGAGACAGGGGAAGTTCTCGTTGCTCTCTTTCGGCGGTGACGACGACGGAAGCGCCGTTGGCGGCGAAGCGAGAGAAAGAGACTTGTCTCAGCTTCTCTCCGCATTGCTTCCCGTTGTTGTTGCTGCCACCGCCGTTGCCGCTCTCGCTAAACCCTCCACTTTTACTTGGGTATCAAAAGAGTTATATGCTCCTGCACTTGGTGGGATTATGTTGTCTATTGGAATAAGACTATCCGTAGATGACTTCGCTCTTGCATTTAAAAGACCTTTGCCACTTACCATTGGGTTAATTGCGCAATACGTGCTTAAGCCTGTTCTTGGAATCTTGGTTGCAAAGGCTTTTGGTTTGTCTAGGATGTTTTACGCGGGCTTTGTCCTCACAGCTTGTGTTTCGGGGGCTCAACTATCCAGCTATGCAAACTTCTTAAGCAAAGGGGATGTAGCCTTGGGCATTCTTCTCACAAGCTATACCACAATTGCATCAGTTATTGTTACACCTCTGTTAACTGGTCTTCTGATTGGATCAGTAGTGCCAGTTGATGCAGTTGCCATGTCAAAGTCAATTCTGCAGGTTGTACTTGTTCCGGTGACCCTTGGTCTTCTTCTCAATACATATGCAAAGTCAGTTGTATCTGTTCTTCAACCTGTGATGCCCTTTGTTGCCATGATTTGTACTTCACTGTGCATTGGCAGCCCTCTTGCTTTAAACAGGAGTCAAATTTTGACAGGCGAAGGTCTCCGGTTGGTTTTTCCAGTATTAACATTTCATGTTGTTGCCTTCACTTTAGGATATTGGTTCTCAAAGATTCCATCCTTGAGGAAGAACAGGTGA

>Glyma.08g344000.3 sequence-type=CDS polypeptide=Glyma.08g344000.3.p locus=Glyma.08g344000 ID=Glyma.08g344000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCTCAATCCCAGTCGCGTGTTCCACACACCCCAGGCTCCAAGCCTCACCCTTATTCCAATCCCACGCGCGCTCCCGCAGCGCGTCCTTCTGGAGGGTTCAGCAGAGGGGTTCGATGGGTGGTGGTGGTGCCGCGTCGAGTTTCGCCTGCTCCACTTCTCAGTTCCGCGGCGGATTCGGGTTCCGGTTCCACCGGAGACAGGGGAAGTTCTCGTTGCTCTCTTTCGGCGGTGACGACGACGGAAGCGCCGTTGGCGGCGAAGCGAGAGAAAGAGACTTGTCTCAGCTTCTCTCCGCATTGCTTCCCGTTGTTGTTGCTGCCACCGCCGTTGCCGCTCTCGCTAAACCCTCCACTTTTACTTGGGTATCAAAAGAGTTATATGCTCCTGCACTTGGTGGGATTATGTTGTCTATTGGAATAAGACTATCCGTAGATGACTTCGCTCTTGCATTTAAAAGACCTTTGCCACTTACCATTGGGTTAATTGCGCAATACGTGCTTAAGCCTGTTCTTGGAATCTTGGTTGCAAAGGCTTTTGGTTTGTCTAGGATGTTTTACGCGGGCTTTGTCCTCACAGCTTGTGTTTCGGGGGCTCAACTATCCAGCTATGCAAACTTCTTAAGCAAAGGGGATGTAGCCTTGGGCATTCTTCTCACAAGCTATACCACAATTGCATCAGTTATTGTTACACCTCTGTTAACTGGTCTTCTGATTGGATCAGTAGTGCCAGTTGATGCAGTTGCCATGTCAAAGTCAATTCTGCAGGTTGTACTTGTTCCGGTGACCCTTGGTCTTCTTCTCAATACATATGCAAAGTCAGTTGTATCTGTTCTTCAACCTGTGATGCCCTTTGTTGCCATGATTTGTACTTCACTGTGCATTGGCAGCCCTCTTGCTTTAAACAGGAGTCAAATTTTGACAGGCGAAGGCAGGAAGAACAGGTGA
Predicted protein sequences of Glyma.08g344000
>Glyma.08g344000.1.p sequence-type=predicted peptide transcript=Glyma.08g344000.1 locus=Glyma.08g344000 ID=Glyma.08g344000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASIPVACSTHPRLQASPLFQSHARSRSASFWRVQQRGSMGGGGAASSFACSTSQFRGGFGFRFHRRQGKFSLLSFGGDDDGSAVGGEARERDLSQLLSALLPVVVAATAVAALAKPSTFTWVSKELYAPALGGIMLSIGIRLSVDDFALAFKRPLPLTIGLIAQYVLKPVLGILVAKAFGLSRMFYAGFVLTACVSGAQLSSYANFLSKGDVALGILLTSYTTIASVIVTPLLTGLLIGSVVPVDAVAMSKSILQVVLVPVTLGLLLNTYAKSVVSVLQPVMPFVAMICTSLCIGSPLALNRSQILTGEGLRLVFPVLTFHVVAFTLGYWFSKIPSLRQEEQVSRTISLCTGMQSSTLAGLLATQFLDSSQAVPPACSVIAMAIMGLCLASFWGSGFVIRNLLPLPPLRTNSAVKT*

>Glyma.08g344000.2.p sequence-type=predicted peptide transcript=Glyma.08g344000.2 locus=Glyma.08g344000 ID=Glyma.08g344000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASIPVACSTHPRLQASPLFQSHARSRSASFWRVQQRGSMGGGGAASSFACSTSQFRGGFGFRFHRRQGKFSLLSFGGDDDGSAVGGEARERDLSQLLSALLPVVVAATAVAALAKPSTFTWVSKELYAPALGGIMLSIGIRLSVDDFALAFKRPLPLTIGLIAQYVLKPVLGILVAKAFGLSRMFYAGFVLTACVSGAQLSSYANFLSKGDVALGILLTSYTTIASVIVTPLLTGLLIGSVVPVDAVAMSKSILQVVLVPVTLGLLLNTYAKSVVSVLQPVMPFVAMICTSLCIGSPLALNRSQILTGEGLRLVFPVLTFHVVAFTLGYWFSKIPSLRKNR*

>Glyma.08g344000.3.p sequence-type=predicted peptide transcript=Glyma.08g344000.3 locus=Glyma.08g344000 ID=Glyma.08g344000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASIPVACSTHPRLQASPLFQSHARSRSASFWRVQQRGSMGGGGAASSFACSTSQFRGGFGFRFHRRQGKFSLLSFGGDDDGSAVGGEARERDLSQLLSALLPVVVAATAVAALAKPSTFTWVSKELYAPALGGIMLSIGIRLSVDDFALAFKRPLPLTIGLIAQYVLKPVLGILVAKAFGLSRMFYAGFVLTACVSGAQLSSYANFLSKGDVALGILLTSYTTIASVIVTPLLTGLLIGSVVPVDAVAMSKSILQVVLVPVTLGLLLNTYAKSVVSVLQPVMPFVAMICTSLCIGSPLALNRSQILTGEGRKNR*






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