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Report for Sequence Feature Glyma.08g343100

Feature Type:gene_model
Chromosome:Gm08
Start:45851572
stop:45852641
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g343100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G07480.1AT 2Fe-2S ferredoxin-like superfamily protein JGI N/AIEA
GO:0009735GO-bp response to cytokinin EnsemblGenomesN/AIEA
GO:0022900GO-bp electron transport chain EnsemblGenomesN/AIEA
GO:0005739GO-cc mitochondrion EnsemblGenomesN/AIEA
GO:0009507GO-cc chloroplast EnsemblGenomesN/AIEA
GO:0009055GO-mf electron transfer activity EnsemblGenomesN/AIEA
GO:0051536GO-mf iron-sulfur cluster binding EnsemblGenomesN/AIEA
KOG3309 KOG Ferredoxin JGI N/AIEA
PTHR23426Panther FERREDOXIN/ADRENODOXIN JGI N/AIEA
PTHR23426:SF7Panther JGI N/AIEA

Expression Patterns of Glyma.08g343100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g343100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g45710 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g343100
>Glyma.08g343100.1 sequence-type=CDS polypeptide=Glyma.08g343100.1.p locus=Glyma.08g343100 ID=Glyma.08g343100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGTGGCGAATCTGCAGAGACTGTCCTCGCAAGTGCACCGCCTCCCCTCCGTCTCGTTCTTCTCCAAATCCCTGATCTCCCGCACCTCCACCTCTTCCTCCTCCACGAAGAAGGTCGCGGACCGCATCGTGCGGCTGTCGGCGATCGACTTCGCGGGTAAGAAGCACGAGGTGGTGGGCCTGGCCGGTCAGACCCTGCTGAAGGCGCTGATAAACACGGGCCTGGTCGACCCGGAGTCCCACCGCCTGGAGGAGATCGACGCCTGCGCGGCCCACTGCGAGGTCAACATCGCGCAGGAGTGGCTCGACAAGCTACCCCCTCGCTCCTACGACGAGGAGTACGTCCTCGTTCGCAATTCCCGAGCAAGGGTCCTCAACAAACACTCCAGGCTCGGATGCCAAGTTCTCCTCGACCACGACCTCGAAGGTATGGTCGTTGCCCTCCCCGAACCTAGGCCCTGGGACACTTCCTAA
Predicted protein sequences of Glyma.08g343100
>Glyma.08g343100.1.p sequence-type=predicted peptide transcript=Glyma.08g343100.1 locus=Glyma.08g343100 ID=Glyma.08g343100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVANLQRLSSQVHRLPSVSFFSKSLISRTSTSSSSTKKVADRIVRLSAIDFAGKKHEVVGLAGQTLLKALINTGLVDPESHRLEEIDACAAHCEVNIAQEWLDKLPPRSYDEEYVLVRNSRARVLNKHSRLGCQVLLDHDLEGMVVALPEPRPWDTS*






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