SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g336200

Feature Type:gene_model
Chromosome:Gm08
Start:44688791
stop:44693305
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g336200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56130.1AT AtTEX1,TEX1,THO3 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12880KEGG Spliceosome JGI N/AIEA
PTHR22839PantherFam THO COMPLEX SUBUNIT 3 THO3 JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.08g336200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g45000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g336200
>Glyma.08g336200.1 sequence-type=CDS polypeptide=Glyma.08g336200.1.p locus=Glyma.08g336200 id=Glyma.08g336200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGAACAAATCCCATTTAAGAATCTCCATAGCAGAGAGTATTCGGGTCACAAGAAGAAGGTGCACTCTGTGGCTTGGAATTGCATTGGCACAAAACTTGCTTCTGGTTCCGTGGACCAAACTGCGCGAATATGGCATATTGAGCCACATGGGCATGGCAAGGTCAAAGATATTGAATTGAAAGGTCACACTGATAGTGTGGATCAGCTATGCTGGGACCCCAAACATGCTGATTTGATTGCAACTGCATCGGGTGACAAGACTGTTCGTTTGTGGGATGCTCGAAGTGGAAAATGCTCTCAACAGGCGGAACTTAGTGGGGAGAATATTAACATCACTTACAAACCTGATGGGACTCATGTAGCTGTTGGTAACAGGGATGATGAATTAACAATACTGGATGTTCGGAAGTTCAAACCAATTCATAGGCGCAAGTTCAATTATGAGGTAAATGAGATTTCTTGGAACATGACGGGTGAGATGTTCTTTCTAACAACAGGAAATGGGACTGTGGAAGTTCTCTCTTACCCATCTCTTCGACCTCTTGACACTCTCATGGCCCATACAGCTGGTTGTTATTGCATCGCAATTGATCCAGTAGGAAGATATTTTGCTGTTGGAAGTGCTGATTCCCTTGTAAGTCTGTGGGATATATCAGAGATGCTCTGCGTGCGTACCTTCACAAAGCTGGAATGGCCTGTCCGGACAATTGGCTTCAATTATTCTGGAGATTTTATTGCTTCTGCAAGTGAAGACTTGTTCATTGATATTTCAAATGTTCATACTGGAAGAACAGTGCATCAAATTCCTTGTAGGGCTGCTATGAACAGTGTTGAGTGGAATCCTAAATACAATTTACTTGCATATGCTGGTGATGACAAAAACAAGCATCAGGCTGATGAAGGTGTTTTTCGCATTTTTGGTTTTAAAAATGCTTAG
Predicted protein sequences of Glyma.08g336200
>Glyma.08g336200.1.p sequence-type=predicted peptide transcript=Glyma.08g336200.1 locus=Glyma.08g336200 id=Glyma.08g336200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEQIPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEISWNMTGEMFFLTTGNGTVEVLSYPSLRPLDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIGFNYSGDFIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKHQADEGVFRIFGFKNA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo