Glyma.08g323300

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Report for Sequence Feature Glyma.08g323300

Feature Type:	gene_model
Chromosome:	Gm08
Start:	44184464
stop:	44187786
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g323300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G26900.1	AT	HIS HF	JGI	N/A	IEA
GO:0000105	GO-bp	histidine biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0000162	GO-bp	tryptophan biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0006541	GO-bp	glutamine metabolic process	EnsemblGenomes	N/A	IEA
GO:0009236	GO-bp	cobalamin biosynthetic process	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
GO:0003949	GO-mf	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	EnsemblGenomes	N/A	IEA
GO:0016763	GO-mf	transferase activity, transferring pentosyl groups	EnsemblGenomes	N/A	IEA
PTHR21235	Panther	IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H (IGP SYNTHASE SUBUNIT HISF/H)	JGI	N/A	IEA
PTHR21235:SF2	Panther	IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF	JGI	N/A	IEA
PF00117	PFAM	Glutamine amidotransferase class-I	JGI	N/A	IEA
GLUTAMINDEG-PWY	SoyCyc9	L-glutamine degradation I	Plant Metabolic Network		ISS
HISTSYN-PWY	SoyCyc9	L-histidine biosynthesis	Plant Metabolic Network		ISS
GN7V-58892	SoyCyc9-rxn	imidazole glycerol phosphate synthase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.08g323300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g323300 not represented in the dataset	Glyma.08g323300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.08g323300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g43541	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.08g323300

Limit To All Plant Sequences

>Glyma.08g323300.1 sequence-type=CDS polypeptide=Glyma.08g323300.1.p locus=Glyma.08g323300 ID=Glyma.08g323300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGAAGCACTATGTTCATATATTGAAAAGGATCGACCATTTTTGGGCATTTGTCTTGGACTTCAACTGCTTTTTGAATCCAGCGAGGAGAATGGACCAGTCAAAGGTCTTGGCTTAATACCTGGAACTGTTGGGAGATTTGACTCATCAAATGGTTTTAGAGTACCCCATATTGGCTGGAATGCTTTACAAATCACGAAGGACTTGGGAATTTTGGATGATGTTGGAAATTATCATGTCTATTTTGTGCACTCTTATCGTGCCATGCCTTCAGATGACAACAATGAGTGGATATCCTCTACCTGTGACTACGGTGACAAATTTATAGCATCTATTAGAAGAGGAAATGTGCATGCAGTTCAATTCCACCCAGAGAAGAGTGGAGGTAAAACACAAGGCTATTATTTTTTGGCTTTCTTGGGATGGCACATTCTTGTTCTGATTCCTGAATATAATATTCTCAGATGTTGGTCTCTCTATTTTGAGAAGATTCTTGAATCCGAAATCAAACATGGCAAAGAAGCCTGGGGAAGGCAAAGCTTCAAAACTTGCAAAAAGGTGATTGCTTGTCTTGATGTGAGAACAAATGATAAAGGGGACCTTGTTGTAACCAAAGGAGAATGA

Predicted protein sequences of Glyma.08g323300

Limit To All Plant Sequences

>Glyma.08g323300.1.p sequence-type=predicted peptide transcript=Glyma.08g323300.1 locus=Glyma.08g323300 ID=Glyma.08g323300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDEALCSYIEKDRPFLGICLGLQLLFESSEENGPVKGLGLIPGTVGRFDSSNGFRVPHIGWNALQITKDLGILDDVGNYHVYFVHSYRAMPSDDNNEWISSTCDYGDKFIASIRRGNVHAVQFHPEKSGGKTQGYYFLAFLGWHILVLIPEYNILRCWSLYFEKILESEIKHGKEAWGRQSFKTCKKVIACLDVRTNDKGDLVVTKGE*

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