|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G20480.1 | AT | tetraacyldisaccharide 4'-kinase family protein | JGI | N/A | IEA |
GO:0009245 | GO-bp | lipid A biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0009245 | GO-bp | lipid A biosynthetic process | JGI | N/A | IEA |
GO:0016310 | GO-bp | phosphorylation | EnsemblGenomes | N/A | IEA |
GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
GO:0009029 | GO-mf | tetraacyldisaccharide 4'-kinase activity | EnsemblGenomes | N/A | IEA |
GO:0009029 | GO-mf | tetraacyldisaccharide 4'-kinase activity | JGI | N/A | IEA |
PF02606 | PFAM | Tetraacyldisaccharide-1-P 4'-kinase | JGI | N/A | IEA |
NAGLIPASYN-PWY | SoyCyc9 | lipid IVA biosynthesis | Plant Metabolic Network | ISS | |
GN7V-67460 | SoyCyc9-rxn | tetraacyldisaccharide 4'-kinase | Plant Metabolic Network | ISS |
Glyma.08g318300 not represented in the dataset |
Glyma.08g318300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma08g43060 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.08g318300.2 sequence-type=transcript locus=Glyma.08g318300 ID=Glyma.08g318300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 AAAATTATAATCCATTAAAACTTTCCACCTTAAGATCACTCATACAATCTGTAAATGATCCTGTTAGGGTAGGGTGAGGCAAAAAAGGTCCTCAAAAAATGAAAATGACAAGAAAGAAGGAGAGGAGACGTTGATGATGGAGAAGTTGAGAAGAGTGGTAAACGAGATAGCCTATGCTCAAACACTCTCTCACCTTCCTCCTCTTCACCGCTCTCTCGTCCCTTTCCTCTCCATTGCCTCATCTCTCTACAAACTCGCTGTCTCGCTTCGCTGCTCACTTTACCAACGCCGCTTCTTTCAACTCCACCGGTTGCCGGTTCCGGTGATCAGCGTTGGTAATTTGAGTTGGGGAGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTGTCATTACGGAATTTCACCCCTCGTTCTTTCTAGGGGTTATGGTGGTGGGGATGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTGTTGGTGCCAATCGAGCTGCTGTTGCAAGTCGTTTTATCCAAAAATATGGCTACGTTGATATTGGTAAGAGTTCATGGCATGAGAAACAGTACCTTGATGAGAAGGTCCAGGATTCTGTTGATTCAGAAAAAATTGGAGTTGTAGTTCTTGATGATGCTATGCAGCACTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTGCTGCCGCGTGGACCTTTAAGGGAACCTTTGACTGCACTTAGACGAGCAGATGCAGTTGTAATCCATCATGCAGACTTGGTTTCTGAGCATACTCTCAAGTATATTGAATCTATGGTCCTAGGGATTAAAAAGTCTGTTCCTATTTTCTTAACAAAATTGGATCCAACTTACTTATTTGAGGTGGGAACTATCAATGCCAAAATACCATTGACGGCTCTTCATGAAACTAATATATTATGTGTTTCTGCTATTGGTTCTGCAGAGCCTTTTGTGAAGCAGATTCAGAAGATGGGAGCACTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAGATGATCAGAGCCAAACTTGGAGAACTAGATGGGAAGTTTGTTCCCAAACCAATTGTTGTAATGACTGAAAAGGATTATGATAGGGACCCAGAAATTCTTAAGCAATTGCACCCATTTAAAGTTTTTGTTCTCTGTTCTGCATTGAAGGTTCTGCCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCATTTAAAATTAGAATTGCCTCCAGCACTACGTCACTAGTCTTGGATATTTTTATGTTGTTGATGGTAATTTTTTTCCTAATTACATAAGGGGCCTTACAAAGTTGATACATTTTTTTTAGTGACTAATTATGTAATAGAAATAAAGTATCTCAAATTTATAATATCGTGGGACTATTTAGTTACTTTTT >Glyma.08g318300.3 sequence-type=transcript locus=Glyma.08g318300 ID=Glyma.08g318300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 GGTGAGGCAAAAAAGGTCCTCAAAAAATGAAAATGACAAGAAAGAAGGAGAGGAGACGTTGATGATGGAGAAGTTGAGAAGAGTGGTAAACGAGATAGCCTATGCTCAAACACTCTCTCACCTTCCTCCTCTTCACCGCTCTCTCGTCCCTTTCCTCTCCATTGCCTCATCTCTCTACAAACTCGCTGTCTCGCTTCGCTGCTCACTTTACCAACGCCGCTTCTTTCAACTCCACCGGTTGCCGGTTCCGGTGATCAGCGTTGGTAATTTGAGTTGGGGAGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTGTCATTACGGAATTTCACCCCTCGTTCTTTCTAGGGGTTATGGTGGTGGGGATGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTGTTGGTGCCAATCGAGCTGCTGTTGCAAGTCGTTTTATCCAAAAATATGGCTACGTTGATATTGGTAAGAGTTCATGGCATGAGAAACAGTACCTTGATGAGAAGGTCCAGGATTCTGTTGATTCAGAAAAAATTGGAGTTGTAGTTCTTGATGATGCTATGCAGCACTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTGCTGCCGCGTGGACCTTTAAGGGAACCTTTGACTGCACTTAGACGAGCAGATGCAGTTGTAATCCATCATGCAGACTTGATGGGAGCACTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAGATGATCAGAGCCAAACTTGGAGAACTAGATGGGAAGTTTGTTCCCAAACCAATTGTTGTAATGACTGAAAAGGATTATGATAGGGACCCAGAAATTCTTAAGCAATTGCACCCATTTAAAGTTTTTGTTCTCTGTTCTGCATTGAAGGTTCTGCCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCATTTAAAATTAGAATTGCCTCCAGCACTACGTCACTAGTCTTGGATATTTTTATGTTGTTGATGGTAATTTTTTTCCTAATTACATAAGGGGCCTTACAAAGTTGATACATTTTTTTTAGTGACTAATTATGTAATAGAAATAAAGTATCTCAAATTT
>Glyma.08g318300.1 sequence-type=CDS polypeptide=Glyma.08g318300.1.p locus=Glyma.08g318300 ID=Glyma.08g318300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGGAGAAGTTGAGAAGAGTGGTAAACGAGATAGCCTATGCTCAAACACTCTCTCACCTTCCTCCTCTTCACCGCTCTCTCGTCCCTTTCCTCTCCATTGCCTCATCTCTCTACAAACTCGCTGTCTCGCTTCGCTGCTCACTTTACCAACGCCGCTTCTTTCAACTCCACCGGTTGCCGGTTCCGGTGATCAGCGTTGGTAATTTGAGTTGGGGAGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTGTCATTACGGAATTTCACCCCTCGTTCTTTCTAGGGGTTATGGTGGTGGGGATGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTGTTGGTGCCAATCGAGCTGCTGTTGCAAGTCGTTTTATCCAAAAATATGGCTACGTTGATATTGGTAAGAGTTCATGGCATGAGAAACAGTACCTTGATGAGAAGGTCCAGGATTCTGTTGATTCAGAAAAAATTGGAGTTGTAGTTCTTGATGATGCTATGCAGCACTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTGCTGCCGCGTGGACCTTTAAGGGAACCTTTGACTGCACTTAGACGAGCAGATGCAGTTGTAATCCATCATGCAGACTTGGTTTCTGAGCATACTCTCAAGTATATTGAATCTATGGTCCTAGGGATTAAAAAGTCTGTTCCTATTTTCTTAACAAAATTGGATCCAACTTACTTATTTGAGGTGGGAACTATCAATGCCAAAATACCATTGACGGCTCTTCATGAAACTAATATATTATGTGTTTCTGCTATTGGTTCTGCAGAGCCTTTTGTGAAGCAGATTCAGAAGATGGGAGCACTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAGATGATCAGAGCCAAACTTGGAGAACTAGATGGGAAGTTTGTTCCCAAACCAATTGTTGTAATGACTGAAAAGGATTATGATAGGGACCCAGAAATTCTTAAGCAATTGCACCCATTTAAAGTTTTTGTTCTCTGTTCTGCATTGAAGGTTCTGCCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCATTTAAAATTAGAATTGCCTCCAGCACTACGTCACTAG >Glyma.08g318300.2 sequence-type=CDS polypeptide=Glyma.08g318300.2.p locus=Glyma.08g318300 ID=Glyma.08g318300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGGAGAAGTTGAGAAGAGTGGTAAACGAGATAGCCTATGCTCAAACACTCTCTCACCTTCCTCCTCTTCACCGCTCTCTCGTCCCTTTCCTCTCCATTGCCTCATCTCTCTACAAACTCGCTGTCTCGCTTCGCTGCTCACTTTACCAACGCCGCTTCTTTCAACTCCACCGGTTGCCGGTTCCGGTGATCAGCGTTGGTAATTTGAGTTGGGGAGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTGTCATTACGGAATTTCACCCCTCGTTCTTTCTAGGGGTTATGGTGGTGGGGATGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTGTTGGTGCCAATCGAGCTGCTGTTGCAAGTCGTTTTATCCAAAAATATGGCTACGTTGATATTGGTAAGAGTTCATGGCATGAGAAACAGTACCTTGATGAGAAGGTCCAGGATTCTGTTGATTCAGAAAAAATTGGAGTTGTAGTTCTTGATGATGCTATGCAGCACTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTGCTGCCGCGTGGACCTTTAAGGGAACCTTTGACTGCACTTAGACGAGCAGATGCAGTTGTAATCCATCATGCAGACTTGGTTTCTGAGCATACTCTCAAGTATATTGAATCTATGGTCCTAGGGATTAAAAAGTCTGTTCCTATTTTCTTAACAAAATTGGATCCAACTTACTTATTTGAGGTGGGAACTATCAATGCCAAAATACCATTGACGGCTCTTCATGAAACTAATATATTATGTGTTTCTGCTATTGGTTCTGCAGAGCCTTTTGTGAAGCAGATTCAGAAGATGGGAGCACTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAGATGATCAGAGCCAAACTTGGAGAACTAGATGGGAAGTTTGTTCCCAAACCAATTGTTGTAATGACTGAAAAGGATTATGATAGGGACCCAGAAATTCTTAAGCAATTGCACCCATTTAAAGTTTTTGTTCTCTGTTCTGCATTGAAGGTTCTGCCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCATTTAAAATTAGAATTGCCTCCAGCACTACGTCACTAG >Glyma.08g318300.3 sequence-type=CDS polypeptide=Glyma.08g318300.3.p locus=Glyma.08g318300 ID=Glyma.08g318300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGGAGAAGTTGAGAAGAGTGGTAAACGAGATAGCCTATGCTCAAACACTCTCTCACCTTCCTCCTCTTCACCGCTCTCTCGTCCCTTTCCTCTCCATTGCCTCATCTCTCTACAAACTCGCTGTCTCGCTTCGCTGCTCACTTTACCAACGCCGCTTCTTTCAACTCCACCGGTTGCCGGTTCCGGTGATCAGCGTTGGTAATTTGAGTTGGGGAGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTGTCATTACGGAATTTCACCCCTCGTTCTTTCTAGGGGTTATGGTGGTGGGGATGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTGTTGGTGCCAATCGAGCTGCTGTTGCAAGTCGTTTTATCCAAAAATATGGCTACGTTGATATTGGTAAGAGTTCATGGCATGAGAAACAGTACCTTGATGAGAAGGTCCAGGATTCTGTTGATTCAGAAAAAATTGGAGTTGTAGTTCTTGATGATGCTATGCAGCACTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTGCTGCCGCGTGGACCTTTAAGGGAACCTTTGACTGCACTTAGACGAGCAGATGCAGTTGTAATCCATCATGCAGACTTGATGGGAGCACTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAGATGATCAGAGCCAAACTTGGAGAACTAGATGGGAAGTTTGTTCCCAAACCAATTGTTGTAATGACTGAAAAGGATTATGATAGGGACCCAGAAATTCTTAAGCAATTGCACCCATTTAAAGTTTTTGTTCTCTGTTCTGCATTGAAGGTTCTGCCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCATTTAAAATTAGAATTGCCTCCAGCACTACGTCACTAG
>Glyma.08g318300.1.p sequence-type=predicted peptide transcript=Glyma.08g318300.1 locus=Glyma.08g318300 ID=Glyma.08g318300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMEKLRRVVNEIAYAQTLSHLPPLHRSLVPFLSIASSLYKLAVSLRCSLYQRRFFQLHRLPVPVISVGNLSWGGNGKTPMVEFIALCFCHYGISPLVLSRGYGGGDEVNMLRRHLLGTPTKFGVGANRAAVASRFIQKYGYVDIGKSSWHEKQYLDEKVQDSVDSEKIGVVVLDDAMQHWSLWRDLDIVMVNGLTLWGNLQLLPRGPLREPLTALRRADAVVIHHADLVSEHTLKYIESMVLGIKKSVPIFLTKLDPTYLFEVGTINAKIPLTALHETNILCVSAIGSAEPFVKQIQKMGALYVDRIDFSDHHIFHARDIEMIRAKLGELDGKFVPKPIVVMTEKDYDRDPEILKQLHPFKVFVLCSALKVLPYRGSTEDSFKKFLKDHLKLELPPALRH* >Glyma.08g318300.2.p sequence-type=predicted peptide transcript=Glyma.08g318300.2 locus=Glyma.08g318300 ID=Glyma.08g318300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMEKLRRVVNEIAYAQTLSHLPPLHRSLVPFLSIASSLYKLAVSLRCSLYQRRFFQLHRLPVPVISVGNLSWGGNGKTPMVEFIALCFCHYGISPLVLSRGYGGGDEVNMLRRHLLGTPTKFGVGANRAAVASRFIQKYGYVDIGKSSWHEKQYLDEKVQDSVDSEKIGVVVLDDAMQHWSLWRDLDIVMVNGLTLWGNLQLLPRGPLREPLTALRRADAVVIHHADLVSEHTLKYIESMVLGIKKSVPIFLTKLDPTYLFEVGTINAKIPLTALHETNILCVSAIGSAEPFVKQIQKMGALYVDRIDFSDHHIFHARDIEMIRAKLGELDGKFVPKPIVVMTEKDYDRDPEILKQLHPFKVFVLCSALKVLPYRGSTEDSFKKFLKDHLKLELPPALRH* >Glyma.08g318300.3.p sequence-type=predicted peptide transcript=Glyma.08g318300.3 locus=Glyma.08g318300 ID=Glyma.08g318300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMEKLRRVVNEIAYAQTLSHLPPLHRSLVPFLSIASSLYKLAVSLRCSLYQRRFFQLHRLPVPVISVGNLSWGGNGKTPMVEFIALCFCHYGISPLVLSRGYGGGDEVNMLRRHLLGTPTKFGVGANRAAVASRFIQKYGYVDIGKSSWHEKQYLDEKVQDSVDSEKIGVVVLDDAMQHWSLWRDLDIVMVNGLTLWGNLQLLPRGPLREPLTALRRADAVVIHHADLMGALYVDRIDFSDHHIFHARDIEMIRAKLGELDGKFVPKPIVVMTEKDYDRDPEILKQLHPFKVFVLCSALKVLPYRGSTEDSFKKFLKDHLKLELPPALRH*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||