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Report for Sequence Feature Glyma.08g315500

Feature Type:gene_model
Chromosome:Gm08
Start:43551775
stop:43556450
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g315500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G28840.1AT XB3 ortholog 1 in Arabidopsis thaliana JGI N/AIEA
AT2G28840.2AT XB3 ortholog 1 in Arabidopsis thaliana JGI N/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG4412 KOG 26S proteasome regulatory complex, subunit PSMD10 JGI N/AIEA
PTHR11707Panther L-ASPARAGINASE JGI N/AIEA
PTHR11707:SF3Panther 60 KDA LYSOPHOSPHOLIPASE JGI N/AIEA
PTHR24158Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24158:SF306Panther JGI N/AIEA
PF00023PFAM Ankyrin repeat JGI N/AIEA

Expression Patterns of Glyma.08g315500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g315500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g42740 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g315500
>Glyma.08g315500.2 sequence-type=transcript locus=Glyma.08g315500 ID=Glyma.08g315500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGGAAGATCCCAATGTTTTGAAACTTACCACTGATGATGATCAAAAACTCTCACCATTGCATGTAGCTGCTGCCACTGGTCAGGTCAAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGTACACCATATTTCTTTCATGACTGATATTAGTTAAGATTTGTAAGGGTATGTTTGGATAAACTTATCAATAAAAACTTATAGaaagaaaagaaaaaagaagaaaagaaGGTAAAATGATTTGAACTTCTTGCATAAGCTAAA

>Glyma.08g315500.3 sequence-type=transcript locus=Glyma.08g315500 ID=Glyma.08g315500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGATCATGTTGTAAGAGAATTTAAAATTATTCTTTTGCCTGCCTTTTTCTGAGTATTGATCATGGTGTTTTTTTTTCCCCTAAAAATTAATTGTCAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGGGGATATTTAAGATTTGTCGACTCGAGAGATTTTAACGGTTTTGCCCCACTGCATCTTGCAGCCCTCAAAGGACAATCTGAATGTGTTGATGCCCTTTTAGACAATGATGCTATTCTTTGTGCTAGAACTAGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGCCGGCAAAAAGGAGTTATGTTCCATTTGCTATGACCGAGTGTGCACATTTGTGGTCAGACCCTGTGGCCATGAAATGTGTGCTCATTGTATCATGAGGCTATGCCAAAAGAAAAGTGATATTGATGCACCTCGCTCTTCTAATTCTAAACCAGTTTGTCCATTTTGCCGTGGTGACATTGTTCGGTTACTTGCTAAGACTAAGTAACAAGAGCAGTGAATCAAGGGAGGAGTGAGGAACCTTGAAGACTAATTAACTACTGTATTTTTTCATGAAGGCATCAAGGTTTCTTAATAGGTGGAGATTTAGAATGATACACATGCTATGTATTTCTGCAGAGAGATTATTAGGTCGTATATTGAAATAAAATTTAAATGTTATATAAGCATTGATTGTGACTATTAACAGAGAACCTAACAGTATTTTCTTTTGTCACATCAATTTATATTTTCAACACATCAAATTATACTTTTAAAATTAAAGTTTGATATC

>Glyma.08g315500.4 sequence-type=transcript locus=Glyma.08g315500 ID=Glyma.08g315500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAATTATTCTTTTGCCTGCCTTTTTCTGAGTATTGATCATGGTGTTTTTTTTTCCCCTAAAAATTAATTGTCAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGGGGATATTTAAGATTTGTCGACTCGAGAGATTTTAACGGTTTTGCCCCACTGCATCTTGCAGCCCTCAAAGGACAATCTGAATGTGTTGATGCCCTTTTAGACAATGATGCTATTCTTTGTGCTAGAACTAGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGTACACCATATTTCTTTCATGACTGATATTAGTTAAGATTTGTAAGGGTATGTTTGGATAAACTTATCAATAAAAACTTATAGaaagaaaagaaaaaagaagaaaagaaGGTAAAATGATTTGAACTTCTTGCATAAGCTAAA
Coding sequences of Glyma.08g315500
>Glyma.08g315500.1 sequence-type=CDS polypeptide=Glyma.08g315500.1.p locus=Glyma.08g315500 ID=Glyma.08g315500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGGAAGATCCCAATGTTTTGAAACTTACCACTGATGATGATCAAAAACTCTCACCATTGCATGTAGCTGCTGCCACTGGTCAGGTCAAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGGGGATATTTAAGATTTGTCGACTCGAGAGATTTTAACGGTTTTGCCCCACTGCATCTTGCAGCCCTCAAAGGACAATCTGAATGTGTTGATGCCCTTTTAGACAATGATGCTATTCTTTGTGCTAGAACTAGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGCCGGCAAAAAGGAGTTATGTTCCATTTGCTATGACCGAGTGTGCACATTTGTGGTCAGACCCTGTGGCCATGAAATGTGTGCTCATTGTATCATGAGGCTATGCCAAAAGAAAAGTGATATTGATGCACCTCGCTCTTCTAATTCTAAACCAGTTTGTCCATTTTGCCGTGGTGACATTGTTCGGTTACTTGCTAAGACTAAGTAA

>Glyma.08g315500.2 sequence-type=CDS polypeptide=Glyma.08g315500.2.p locus=Glyma.08g315500 ID=Glyma.08g315500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGGAAGATCCCAATGTTTTGAAACTTACCACTGATGATGATCAAAAACTCTCACCATTGCATGTAGCTGCTGCCACTGGTCAGGTCAAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGTACACCATATTTCTTTCATGACTGATATTAGTTAA

>Glyma.08g315500.3 sequence-type=CDS polypeptide=Glyma.08g315500.3.p locus=Glyma.08g315500 ID=Glyma.08g315500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTTTTTTTTTCCCCTAAAAATTAATTGTCAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGGGGATATTTAAGATTTGTCGACTCGAGAGATTTTAACGGTTTTGCCCCACTGCATCTTGCAGCCCTCAAAGGACAATCTGAATGTGTTGATGCCCTTTTAGACAATGATGCTATTCTTTGTGCTAGAACTAGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGCCGGCAAAAAGGAGTTATGTTCCATTTGCTATGACCGAGTGTGCACATTTGTGGTCAGACCCTGTGGCCATGAAATGTGTGCTCATTGTATCATGAGGCTATGCCAAAAGAAAAGTGATATTGATGCACCTCGCTCTTCTAATTCTAAACCAGTTTGTCCATTTTGCCGTGGTGACATTGTTCGGTTACTTGCTAAGACTAAGTAA

>Glyma.08g315500.4 sequence-type=CDS polypeptide=Glyma.08g315500.4.p locus=Glyma.08g315500 ID=Glyma.08g315500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTTTTTTTTTCCCCTAAAAATTAATTGTCAGGTTCTTTCCATGTTGTTGGACAGGAATATGAACGTTGACATAGTGAATCACAATAATCAGACCCCGTTGATGTATGCTGCAAAGCAGGGAAAGATTGATTGTGTTAAAAAGCTTATCCAGGCTGGAGCAAATGTATTCATGATTGATTCTGTACATGGAGGAGGTTGCTTGCACGATGCAGCTTCTCATGGCCACGTAGATTGCCTTAAAGCCATTCTTTTTGCTGCTCATTTCACAGCTTTTGAAGATTCTCGGGGATATTTAAGATTTGTCGACTCGAGAGATTTTAACGGTTTTGCCCCACTGCATCTTGCAGCCCTCAAAGGACAATCTGAATGTGTTGATGCCCTTTTAGACAATGATGCTATTCTTTGTGCTAGAACTAGTAACTGTGGAGGCACAGCACTTCATTTGGCTGCCCGCAGTGGTTCCTTGGACTGTATCCGGATTTTGCTTGCTCGGGGAGCTGATAGACTTCAATTTGATTATCATGGGAATACACCATACACAATTGCCCTGGAGCACGGGCACGAGGAATGTGCTGCCCTGCTAGGTTCTACGTCGGGATCATCACTTGTTTGGCCAAACCATTTAAGGTTCATCAGAGAGCTTGATAAGAAAACAAAGGCCTTACTGGAAAAGGCCTTGGTAGAACTTAACAAGGAGAGGCAGAAAGCCAAAAATAAGCCACGATCATCACGGAATTTGGAGAGAAATAACAATAATATTGCCTCTATGGTACACCATATTTCTTTCATGACTGATATTAGTTAA
Predicted protein sequences of Glyma.08g315500
>Glyma.08g315500.1.p sequence-type=predicted peptide transcript=Glyma.08g315500.1 locus=Glyma.08g315500 ID=Glyma.08g315500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEEDPNVLKLTTDDDQKLSPLHVAAATGQVKVLSMLLDRNMNVDIVNHNNQTPLMYAAKQGKIDCVKKLIQAGANVFMIDSVHGGGCLHDAASHGHVDCLKAILFAAHFTAFEDSRGYLRFVDSRDFNGFAPLHLAALKGQSECVDALLDNDAILCARTSNCGGTALHLAARSGSLDCIRILLARGADRLQFDYHGNTPYTIALEHGHEECAALLGSTSGSSLVWPNHLRFIRELDKKTKALLEKALVELNKERQKAKNKPRSSRNLERNNNNIASMAGKKELCSICYDRVCTFVVRPCGHEMCAHCIMRLCQKKSDIDAPRSSNSKPVCPFCRGDIVRLLAKTK*

>Glyma.08g315500.2.p sequence-type=predicted peptide transcript=Glyma.08g315500.2 locus=Glyma.08g315500 ID=Glyma.08g315500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEEDPNVLKLTTDDDQKLSPLHVAAATGQVKVLSMLLDRNMNVDIVNHNNQTPLMYAAKQGKIDCVKKLIQAGANVFMIDSVHGGGCLHDAASHGHVDCLKAILFAAHFTAFEDSRNCGGTALHLAARSGSLDCIRILLARGADRLQFDYHGNTPYTIALEHGHEECAALLGSTSGSSLVWPNHLRFIRELDKKTKALLEKALVELNKERQKAKNKPRSSRNLERNNNNIASMVHHISFMTDIS*

>Glyma.08g315500.3.p sequence-type=predicted peptide transcript=Glyma.08g315500.3 locus=Glyma.08g315500 ID=Glyma.08g315500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVFFFPLKINCQVLSMLLDRNMNVDIVNHNNQTPLMYAAKQGKIDCVKKLIQAGANVFMIDSVHGGGCLHDAASHGHVDCLKAILFAAHFTAFEDSRGYLRFVDSRDFNGFAPLHLAALKGQSECVDALLDNDAILCARTSNCGGTALHLAARSGSLDCIRILLARGADRLQFDYHGNTPYTIALEHGHEECAALLGSTSGSSLVWPNHLRFIRELDKKTKALLEKALVELNKERQKAKNKPRSSRNLERNNNNIASMAGKKELCSICYDRVCTFVVRPCGHEMCAHCIMRLCQKKSDIDAPRSSNSKPVCPFCRGDIVRLLAKTK*

>Glyma.08g315500.4.p sequence-type=predicted peptide transcript=Glyma.08g315500.4 locus=Glyma.08g315500 ID=Glyma.08g315500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVFFFPLKINCQVLSMLLDRNMNVDIVNHNNQTPLMYAAKQGKIDCVKKLIQAGANVFMIDSVHGGGCLHDAASHGHVDCLKAILFAAHFTAFEDSRGYLRFVDSRDFNGFAPLHLAALKGQSECVDALLDNDAILCARTSNCGGTALHLAARSGSLDCIRILLARGADRLQFDYHGNTPYTIALEHGHEECAALLGSTSGSSLVWPNHLRFIRELDKKTKALLEKALVELNKERQKAKNKPRSSRNLERNNNNIASMVHHISFMTDIS*






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