SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g295800

Feature Type:gene_model
Chromosome:Gm08
Start:40518860
stop:40521362
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g295800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G01470.1AT ATHB-1,ATHB1,HAT5,HB-1,HD-ZIP-1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
K09338KEGG Transcription factors JGI N/AIEA
KOG0484 KOG Transcription factor PHOX2/ARIX, contains HOX domain JGI N/AIEA
PTHR24326PantherFam HOMEOBOX-LEUCINE ZIPPER PROTEIN JGI N/AIEA
PF00046Pfam Homeodomain JGI N/AIEA
PF02183Pfam Homeobox associated leucine zipper JGI N/AIEA

Gene model name correspondences to Glyma.08g295800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g40705 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g295800
>Glyma.08g295800.1 sequence-type=CDS polypeptide=Glyma.08g295800.1.p locus=Glyma.08g295800 id=Glyma.08g295800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGGTGAGAAGCTGCATGAGGGTTCAAGCATGACACTTTTGCTCCAAAAAGAAAGGCTTACATGCTCCCCTGAACTTATTCGATCTTTTTGGGTTCAAAACTCTGAATCTTCTTTTCAAGGTTCAAAATCCTTGGCTAATGTTGTGAATGTCACGCAAAGGCCCTTCTTTCAAGGGCTTGAGAAAGAAGAGAACGGTGAGGATGAGGACTTTGGGGTGTGCCTAAATCAACCCGGTAAGAAAAGGAGGCTCACAAGCAAACAAGTGCAGTTCCTTGAAAGTAACTTCGAGGTTGAAAACAAGCTTGAACCCGAAAGGAAGGTCCAACTTGCCAAAGAACTTGGCATGCAACCAAGGCAAGTTGCCATATGGTTCCAAAACCGTAGGGCAAGGTTCAAGACAAAACAGCTTGAGAAAGACTATGGTGTGTTGAAAGCTAGCTATGACGTACTCAAAAGGGACTATGACAATCTCCTTCAGGAGAGTGATAAGTTAAAGGAAGAGGTTAATTCTCTCAAGACCAGATTGATTCCCAGAGAGCAAGAGGAACAGAATTTGGATGATACTTCCTGTGATGCTGTCAACTCACAGCATAAAGAGCAGAAAGATTTAATCACAAACACAGTTTCAGAAAATGGATCAAAAGTGCCACTTCCTGTTACGGTAACAAGCAAACAGGAAGATGCTAATTCAGCTAAAAGTGATGTTCTTGATTCGGATAGTCCACATTTCACTGATGGAAACCAATTCTCACTTATGGAGCCTGCAGATTCCTCCCATGCCGTCGAACCAGACCACTCTGCTTTCTCGCAAGACGAAGAAGACATCCTCAGCCAAAACATCTTGACCATGCCGTTCTTACCAAAGGTTGAAGATGTCTGCTATGATGAACCACATGAAGATTCTTGCAGCTTTCGGTTCCCAGTTGAAGATCAAACCTTCTGTTTTTGGTCTTATTGA
Predicted protein sequences of Glyma.08g295800
>Glyma.08g295800.1.p sequence-type=predicted peptide transcript=Glyma.08g295800.1 locus=Glyma.08g295800 id=Glyma.08g295800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAGEKLHEGSSMTLLLQKERLTCSPELIRSFWVQNSESSFQGSKSLANVVNVTQRPFFQGLEKEENGEDEDFGVCLNQPGKKRRLTSKQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYGVLKASYDVLKRDYDNLLQESDKLKEEVNSLKTRLIPREQEEQNLDDTSCDAVNSQHKEQKDLITNTVSENGSKVPLPVTVTSKQEDANSAKSDVLDSDSPHFTDGNQFSLMEPADSSHAVEPDHSAFSQDEEDILSQNILTMPFLPKVEDVCYDEPHEDSCSFRFPVEDQTFCFWSY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo