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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G12790.1 | AT | P-loop containing nucleoside triphosphate hydrolases superfamily protein | JGI | N/A | IEA |
GO:0044376 | GO-bp | obsolete RNA polymerase II complex import to nucleus | EnsemblGenomes | N/A | IEA |
GO:1990022 | GO-bp | obsolete RNA polymerase III complex import into nucleus | EnsemblGenomes | N/A | IEA |
GO:0005622 | GO-cc | intracellular | EnsemblGenomes | N/A | IEA |
GO:0000166 | GO-mf | nucleotide binding | JGI | N/A | IEA |
GO:0003924 | GO-mf | GTPase activity | EnsemblGenomes | N/A | IEA |
KOG1534 | KOG | Putative transcription factor FET5 | JGI | N/A | IEA |
PTHR21231 | Panther | XPA-BINDING PROTEIN 1-RELATED | JGI | N/A | IEA |
PTHR21231:SF4 | Panther | GPN-LOOP GTPASE 3 | JGI | N/A | IEA |
PF03029 | PFAM | Conserved hypothetical ATP binding protein | JGI | N/A | IEA |
Glyma.08g288700 not represented in the dataset |
Glyma.08g288700 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma08g39880 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.08g288700.2 sequence-type=transcript locus=Glyma.08g288700 ID=Glyma.08g288700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 AACTTAATTTATTTTGTAACGCCAAACGTCCATCCAAAATTGCGTTCCTAAATCGCCGCTACCGAACACAGCCGTAGACTTTTAATTCATTCCGCTGCGTTTCTTTCTCTGCACTTCAAAGTTCAAACCCTAGCGAAGCATCCACTGTCGCCGTCGCACACTCGCACGCCGCTCACAGgtttatggGCTACGCTGATGTCCTGAATTTGTTGTTGGCCGTGGTGGTTTGGTGCACTGCTTACGTTACTGTTGTAGTTCTCGCTTCCTTTCGAGCCGTTTGCACTTTCTGAAACCTTGCAATTTCATTGATAACATGGGTTATGCACAGCTTGTCATAGGTCCTGCTGGTAGTGGCAAGTCCACGTATTGCTCAAGTTTGTATGAACACTGTGTTGCTGCACGGCGATCGATACATGTTGTGAATCTTGACCCTGCTGCTGAAAATTTTGACTATCCTGTTGCGATGGATATAAGGGAACTCATTTCCCTAGATGATGTTATGGAGGAACTTGGATTGGGTCCTAATGGTGGTCTTGTCTACTGCATGGAACACCTTGAAGATAACCTAGATGATTGGCTCACTGAGGAACTGGACAATTATTTAGATGATGATTACTTGGTTTTCGACTGCCCTGGTCAGATAGAACTATATTCACATGTCCCAGTGCTTAAGAATTTTGTGGAACATTTGAAACGGAAAAATTTTAGTGTTTGTGCTGTTTACTTACTTGATTCACAGTTCATGACAGACGTGACCAAGTTTATAAGTGGATGCATGGCATGTCTTTCTGCGATGGTTCAACTTGAACTACCTCATGTTAATATCCTCTCAAAGATGGACCTTGTGACTAAAAAGAAGGATCTTGAAGATTTTTTGGATCCAGAGCCCACCTTTTTATTGTCTGAATTGAATCAACGGATGGGTCCTCAGTATGCAAAGCTGAATAAGGCTTTGATTGAATTGGTAAATAACTATAGCATGGTGAGTTTTATACCATTAGACTTAAGGAAGGAAAAAAGTATACAATATGTACTGGCCCAAATTGACAACTGCATTCAATATGGAGAAGATGCAGATGTGAAGGTTAAGGATTTTGACCCTGAGGATGATGAGTAGCCAATCCCCTTCTGCAACACTGCTTGGTATAATTGAAAGTTCTGCTTAACTTCGACATTATGGTGTACCAAGCTGAAGTTGTTAATATGTAGTATCTCATTAGATTGTTTTAATGTGAATTGAGGAAGTTGAACATTTATACAGTTTATCCTCTAAATGGGATGAAAAATTGGCTAGCTTGATCATTCTCTTGCCATTACTGCTTCCTTTCTGGGAATTTTATGACTTTGGTCGCAAGAGTAAAAATCTGATGGCAAAGTAGACAATGCAAGAATGAGAAGGATGAATTTGTATGATGAAAATATTGACTGAGCCTGTTTGAATACAAGGCTAGCTGAGTTTTTGTGAGCATGACACTAAAAGGTAAACGTATTTGTCACGTACAGGAAAGAACTAGTGAACTGGGATTAGCTGTAGTTTTACTATATACAACAGAGAATTTAATTTACGTTG
>Glyma.08g288700.1 sequence-type=CDS polypeptide=Glyma.08g288700.1.p locus=Glyma.08g288700 ID=Glyma.08g288700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGTTATGCACAGCTTGTCATAGGTCCTGCTGGTAGTGGCAAGTCCACGTATTGCTCAAGTTTGTATGAACACTGTGTTGCTGCACGGCGATCGATACATGTTGTGAATCTTGACCCTGCTGCTGAAAATTTTGACTATCCTGTTGCGATGGATATAAGGGAACTCATTTCCCTAGATGATGTTATGGAGGAACTTGGATTGGGTCCTAATGGTGGTCTTGTCTACTGCATGGAACACCTTGAAGATAACCTAGATGATTGGCTCACTGAGGAACTGGACAATTATTTAGATGATGATTACTTGGTTTTCGACTGCCCTGGTCAGATAGAACTATATTCACATGTCCCAGTGCTTAAGAATTTTGTGGAACATTTGAAACGGAAAAATTTTAGTGTTTGTGCTGTTTACTTACTTGATTCACAGTTCATGACAGACGTGACCAAGTTTATAAGTGGATGCATGGCATGTCTTTCTGCGATGGTTCAACTTGAACTACCTCATGTTAATATCCTCTCAAAGATGGACCTTGTGACTAAAAAGAAGGATCTTGAAGATTTTTTGGATCCAGAGCCCACCTTTTTATTGTCTGAATTGAATCAACGGATGGGTCCTCAGTATGCAAAGCTGAATAAGGCTTTGATTGAATTGGTAAATAACTATAGCATGGTGAGTTTTATACCATTAGACTTAAGGAAGGAAAAAAGTATACAATATGTACTGGCCCAAATTGACAACTGCATTCAATATGGAGAAGATGCAGATGTGAAGGTTAAGGATTTTGACCCTGAGGATGATGAGTAG >Glyma.08g288700.2 sequence-type=CDS polypeptide=Glyma.08g288700.2.p locus=Glyma.08g288700 ID=Glyma.08g288700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGTTATGCACAGCTTGTCATAGGTCCTGCTGGTAGTGGCAAGTCCACGTATTGCTCAAGTTTGTATGAACACTGTGTTGCTGCACGGCGATCGATACATGTTGTGAATCTTGACCCTGCTGCTGAAAATTTTGACTATCCTGTTGCGATGGATATAAGGGAACTCATTTCCCTAGATGATGTTATGGAGGAACTTGGATTGGGTCCTAATGGTGGTCTTGTCTACTGCATGGAACACCTTGAAGATAACCTAGATGATTGGCTCACTGAGGAACTGGACAATTATTTAGATGATGATTACTTGGTTTTCGACTGCCCTGGTCAGATAGAACTATATTCACATGTCCCAGTGCTTAAGAATTTTGTGGAACATTTGAAACGGAAAAATTTTAGTGTTTGTGCTGTTTACTTACTTGATTCACAGTTCATGACAGACGTGACCAAGTTTATAAGTGGATGCATGGCATGTCTTTCTGCGATGGTTCAACTTGAACTACCTCATGTTAATATCCTCTCAAAGATGGACCTTGTGACTAAAAAGAAGGATCTTGAAGATTTTTTGGATCCAGAGCCCACCTTTTTATTGTCTGAATTGAATCAACGGATGGGTCCTCAGTATGCAAAGCTGAATAAGGCTTTGATTGAATTGGTAAATAACTATAGCATGGTGAGTTTTATACCATTAGACTTAAGGAAGGAAAAAAGTATACAATATGTACTGGCCCAAATTGACAACTGCATTCAATATGGAGAAGATGCAGATGTGAAGGTTAAGGATTTTGACCCTGAGGATGATGAGTAG
>Glyma.08g288700.1.p sequence-type=predicted peptide transcript=Glyma.08g288700.1 locus=Glyma.08g288700 ID=Glyma.08g288700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGYAQLVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLDDVMEELGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDDDYLVFDCPGQIELYSHVPVLKNFVEHLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDLVTKKKDLEDFLDPEPTFLLSELNQRMGPQYAKLNKALIELVNNYSMVSFIPLDLRKEKSIQYVLAQIDNCIQYGEDADVKVKDFDPEDDE* >Glyma.08g288700.2.p sequence-type=predicted peptide transcript=Glyma.08g288700.2 locus=Glyma.08g288700 ID=Glyma.08g288700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGYAQLVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLDDVMEELGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDDDYLVFDCPGQIELYSHVPVLKNFVEHLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDLVTKKKDLEDFLDPEPTFLLSELNQRMGPQYAKLNKALIELVNNYSMVSFIPLDLRKEKSIQYVLAQIDNCIQYGEDADVKVKDFDPEDDE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||