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Report for Sequence Feature Glyma.08g285400

Feature Type:gene_model
Chromosome:Gm08
Start:38911153
stop:38916787
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g285400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G60590.1AT JGI N/AIEA
3.2.1.15EC endo-polygalacturonase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004650GO-mf polygalacturonase activity JGI N/AIEA
PTHR31375PantherFam FAMILY NOT NAMED JGI N/AIEA
PF00295Pfam Glycosyl hydrolases family 28 JGI N/AIEA
PF13229Pfam Right handed beta helix region JGI N/AIEA

Gene model name correspondences to Glyma.08g285400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g39340 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g285400
>Glyma.08g285400.1 sequence-type=CDS polypeptide=Glyma.08g285400.1.p locus=Glyma.08g285400 id=Glyma.08g285400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGTGGCTTGAGTTTCAAGGGCTTCACATACATGTTCCTCATTGCATTTCTCATTTGGTCCTTCAATTTTGAAGCCTGCATTGCAAGAAGAGGCAAGCACTGGAGGCAAAGCAGGGATGTCTCTGCTTCTTTGTACAAGAAGAAAGGCAAAAACTATAGCAATGCTCACAACAAGAACCATGGTGGAGGATCAAAATCAAAGCCTCCATCATCACACAAAGGCACACCAACATTACCAAAGCCTCCACCACAACATAAGAACACTCCCTCACCACCATATCCAACTCCACCAAGTGATGATACCCCCACAACTCCACCACCAAAAGGTTACAATGGTGGTGGCCATTCTCCCACCACCACCTTCAATGTGCTTGATTTTGGAGCCAAGGGAGATGGAAAATCTGATGACACAAAGGCATTTCAAGAGGCTTGGGCTGAAGCTTGTAAAGTAGAATCATCAACCATGCTCGTCCCAGCAGACTACGTATTCTTTGTGGGGCCCATTTCATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAGCTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGACTACTACAGTGGTTGGAATTTTCCAAGTTAGTGGGAATTACCATCCAAGGAAATGGCATCATTGATGGAAGAGGCTCAGTGTGGTGGCAAGACAATCCATATGATGATCCTATTGATGATGAAGAAAAGCTCATTGTCCCTTTGAACCACACAATAGGGAGCCCGAGCCCTCCACTGCCGATTCAAAGTGAGATGGGAGGAAAAATGCCATCCGTCAAGCCAACTGCATTGCGGTTCTATGGGAGTTTTAATCCAACAGTTACAGGCATAACAATTCAAAATAGTCCACAATGCCATCTCAAGTTTGACAGCTGTAATGGGGTCATGGTCCATAATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACAATGTCAACTGTGGACCAGGGCATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACCAGAGCCTGTGTCTCAAACATTACTGTCAGGGATGTCAACATGCACAACACAATGAATGGTGTCAGAATCAAAACATGGCAGGGTGGATCAGGTTCTGTACAAGGAGTGCTATTCTCAAATATACAAGTTTCTGAAGTTGAACTCCCAATTGTGATCGATCAATTCTACTGTGACAAAAGAACCTGCAAAAACCAAACGTCAGCTGTGTCTCTCGCCGGAATCAACTATGAAAGGATAAGGGGGACATACACCGTTAAGCCAGTTCATTTTGCCTGCAGTGATAGCCTACCTTGTGTGGATGTTTCTCTAACCTCTGTTGAGTTAAAACCAATTCAAGAAAAATACCATCTTTACAATCCTTTCTGCTGGCAGACTTATGGTGAATTGAAAACTCCAACAGTCCCACCAATTGATTGTCTACAAATCGGGAAGCCAACAAACAATCGGATTCAGACAGATCATGATTTATGTTGA

>Glyma.08g285400.4 sequence-type=CDS polypeptide=Glyma.08g285400.4.p locus=Glyma.08g285400 id=Glyma.08g285400.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGTGGCTTGAGTTTCAAGGGCTTCACATACATGTTCCTCATTGCATTTCTCATTTGGTCCTTCAATTTTGAAGCCTGCATTGCAAGAAGAGGCAAGCACTGGAGGCAAAGCAGGGATGTCTCTGCTTCTTTGTACAAGAAGAAAGGCAAAAACTATAGCAATGCTCACAACAAGAACCATGGTGGAGGATCAAAATCAAAGCCTCCATCATCACACAAAGGCACACCAACATTACCAAAGCCTCCACCACAACATAAGAACACTCCCTCACCACCATATCCAACTCCACCAAGTGATGATACCCCCACAACTCCACCACCAAAAGGTTACAATGGTGGTGGCCATTCTCCCACCACCACCTTCAATGTGCTTGATTTTGGAGCCAAGGGAGATGGAAAATCTGATGACACAAAGGCATTTCAAGAGGCTTGGGCTGAAGCTTGTAAAGTAGAATCATCAACCATGCTCGTCCCAGCAGACTACGTATTCTTTGTGGGGCCCATTTCATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAGCTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGACTACTACAGTGGTTGGAATTTTCCAAGTTAGTGGGAATTACCATCCAAGGAAATGGCATCATTGATGGAAGAGGCTCAGTGTGGTGGCAAGACAATCCATATGATGATCCTATTGATGATGAAGAAAAGCTCATTGTCCCTTTGAACCACACAATAGGGAGCCCGAGCCCTCCACTGCCGGTAATTATTCAAAGTGAGATGGGAGGAAAAATGCCATCCGTCAAGCCAACTGCATTGCGGTTCTATGGGAGTTTTAATCCAACAGTTACAGGCATAACAATTCAAAATAGTCCACAATGCCATCTCAAGTTTGACAGCTGTAATGGGGTCATGGTCCATAATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACAATGTCAACTGTGGACCAGGGCATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACCAGAGCCTGTGTCTCAAACATTACTGTCAGGGATGTCAACATGCACAACACAATGAATGGTGTCAGAATCAAAACATGGCAGGGTGGATCAGGTTCTGTACAAGGAGTGCTATTCTCAAATATACAAGTTTCTGAAGTTGAACTCCCAATTGTGATCGATCAATTCTACTGTGACAAAAGAACCTGCAAAAACCAAACGTCAGCTGTGTCTCTCGCCGGAATCAACTATGAAAGGATAAGGGGGACATACACCGTTAAGCCAGTTCATTTTGCCTGCAGTGATAGCCTACCTTGTGTGGATGTTTCTCTAACCTCTGTTGAGTTAAAACCAATTCAAGAAAAATACCATCTTTACAATCCTTTCTGCTGGCAGACTTATGGTGAATTGAAAACTCCAACAGTCCCACCAATTGATTGTCTACAAATCGGGAAGCCAACAAACAATCGGATTCAGACAGATCATGATTTATGTTGA
Predicted protein sequences of Glyma.08g285400
>Glyma.08g285400.1.p sequence-type=predicted peptide transcript=Glyma.08g285400.1 locus=Glyma.08g285400 id=Glyma.08g285400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGLSFKGFTYMFLIAFLIWSFNFEACIARRGKHWRQSRDVSASLYKKKGKNYSNAHNKNHGGGSKSKPPSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNPYDDPIDDEEKLIVPLNHTIGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC*

>Glyma.08g285400.4.p sequence-type=predicted peptide transcript=Glyma.08g285400.4 locus=Glyma.08g285400 id=Glyma.08g285400.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGLSFKGFTYMFLIAFLIWSFNFEACIARRGKHWRQSRDVSASLYKKKGKNYSNAHNKNHGGGSKSKPPSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNPYDDPIDDEEKLIVPLNHTIGSPSPPLPVIIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC*






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