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Report for Sequence Feature Glyma.08g275600

Feature Type:gene_model
Chromosome:Gm08
Start:36071290
stop:36077016
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g275600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G22620.2AT JGI N/AIEA
4.2.2.23EC rhamnogalacturonan endolyase JGI N/AIEA
K18195KEGG Enzymes with EC numbers JGI N/AIEA
PTHR32018PantherFam RHAMNOGALACTURONATE LYASE FAMILY PROTEIN JGI N/AIEA
PTHR32018:SF6PantherFam RHAMNOGALACTURONAN ENDOLYASE JGI N/AIEA
PF06045Pfam Rhamnogalacturonate lyase family JGI N/AIEA
PF14683Pfam Polysaccharide lyase family 4, domain III JGI N/AIEA
PF14686Pfam Polysaccharide lyase family 4, domain II JGI N/AIEA

Gene model name correspondences to Glyma.08g275600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g37420 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g275600
>Glyma.08g275600.1 sequence-type=CDS polypeptide=Glyma.08g275600.1.p locus=Glyma.08g275600 id=Glyma.08g275600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAATGGCATCATTCGGGTCAGTTTGTCAAAACCGGAGGGCACTGTCCTAGGAATATCATACAATGGAATAGATAATGTGCTTGAACGTCGCAACAAATTTAATAATAGAGGGTTCCACTACATGGCTATAGCAGATGATAGGCAACGAGTCATGCCAACGGCAGAAGATAGATCTAAAGGGAGACGCCTTGATTTTGATGAAGCAGTTCTAATAACCAACCCTAGTAATCCAGAACTTCAAGGAGAGGTTGATGACAAATACCAATATTCTTGTGAGAACAAAGACAATAAAGTTCATGGGTGGATTAACTTGGACTCCAATTCCAATGAATCTGTGGGCTTCTGGATGATAACACCAAGTAATGAGTTTCGTAGTGGTGGCCCAATTAAGCAAGGCCTCACTTCTCATGTCGGGCCAACCACACTCAATATACTTCATACCACTCATTACTCGGGGAAGGAGGTAACCATGGCATTAAAAGAAGGGGAACCCTTCAAGAAAGTTTATGGCCCTGTTTTTGCTTATCTGAACTCAGTTTCTAGTGGCCATGATTCACAAGCCCTATGGAGTGATGCTGTACAACAGCTGTCTGAGGAAATCAAAAGTTGGCCTTATGATTTCCCTAATTCAGAAGAATTTTTCCCAGCCAATAAACGAGGAAGGGTGGAAGGAAGATTACTAGTCCAAGACCGGTACATGTTCATGAATTATCTAATTCTATTTTATAAATTTTATAATGATAGAAAAGAGCTAATGTTCCTTATCTTTACCTCCAGGCACATTCAGGGAGGGAATTTTGTATATGGCGACAATGCTTATGTTGGTTTGGCTCTTCCGGGAGATGTGGGATCATGGCAAAGACAAAGCAAGGGTTACCAATTTTGGACTGAAGCTGACAAAGTAGGTCAATTCACAATTGAAAATATTCTACCGGGGGACTATGATTTATATGCATGGGTTCCTGGCATTTTTGGGGACTATAAACATAACACTACTATAACCATCACACCAGGTTGTGTTATCCAATTGGGTTCACTAATATACCATCCACCAAGAAATGGACCTACCATATGGGAAATTGGCATTCCAGATCGCTCTGCTGCGGAGTTCTATGTTCCAGATCCTTATCCTAACCTCATCAACCGATTATACATTGGGAAACCAGCACACAAGTTTAGACAATACGGATTATGGCAGCGTTATACCGAGTTATACCCAAGTCAGGACCTCGTTTATAATGTTGATGTCAGTAATTATAGTAAAGATTGGTTTTATGCTCAGATTCCCAGGAACATAGGAAACAACACATTTAGCCCAACAACATGGGAGATTAAATTCCATCTCCCATTTGTTATAAGAGGCACCTACACACTGCAACTTGCCTTGGCCTCAGCTACTCGTTCTAACTTGGTGGTTCGGCTCAATAACCCTGTGGCTCGTCCTCCACACTTCTCAACGGGATTAATAGGCCGAGACAATTCCGTAGCAAGACATGGCATCCATGGATTGCACAGGCCTTACAGCATTGAAGTACCAAGCTATCTATTGGTGGAAGGAACCAACACCATCTATTTGAGGCAATCAAAAGGTCTAAGTCCTTTCCTAGGAGTTATGTATGACTACATCCGTTTGGAAAGACCTGAAACTTAG

>Glyma.08g275600.2 sequence-type=CDS polypeptide=Glyma.08g275600.2.p locus=Glyma.08g275600 id=Glyma.08g275600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTATAGCAGATGATAGGCAACGAGTCATGCCAACGGCAGAAGATAGATCTAAAGGGAGACGCCTTGATTTTGATGAAGCAGTTCTAATAACCAACCCTAGTAATCCAGAACTTCAAGGAGAGGTTGATGACAAATACCAATATTCTTGTGAGAACAAAGACAATAAAGTTCATGGGTGGATTAACTTGGACTCCAATTCCAATGAATCTGTGGGCTTCTGGATGATAACACCAAGTAATGAGTTTCGTAGTGGTGGCCCAATTAAGCAAGGCCTCACTTCTCATGTCGGGCCAACCACACTCAATATACTTCATACCACTCATTACTCGGGGAAGGAGGTAACCATGGCATTAAAAGAAGGGGAACCCTTCAAGAAAGTTTATGGCCCTGTTTTTGCTTATCTGAACTCAGTTTCTAGTGGCCATGATTCACAAGCCCTATGGAGTGATGCTGTACAACAGCTGTCTGAGGAAATCAAAAGTTGGCCTTATGATTTCCCTAATTCAGAAGAATTTTTCCCAGCCAATAAACGAGGAAGGGTGGAAGGAAGATTACTAGTCCAAGACCGGCACATTCAGGGAGGGAATTTTGTATATGGCGACAATGCTTATGTTGGTTTGGCTCTTCCGGGAGATGTGGGATCATGGCAAAGACAAAGCAAGGGTTACCAATTTTGGACTGAAGCTGACAAAGTAGGTCAATTCACAATTGAAAATATTCTACCGGGGGACTATGATTTATATGCATGGGTTCCTGGCATTTTTGGGGACTATAAACATAACACTACTATAACCATCACACCAGGTTGTGTTATCCAATTGGGTTCACTAATATACCATCCACCAAGAAATGGACCTACCATATGGGAAATTGGCATTCCAGATCGCTCTGCTGCGGAGTTCTATGTTCCAGATCCTTATCCTAACCTCATCAACCGATTATACATTGGGAAACCAGCACACAAGTTTAGACAATACGGATTATGGCAGCGTTATACCGAGTTATACCCAAGTCAGGACCTCGTTTATAATGTTGATGTCAGTAATTATAGTAAAGATTGGTTTTATGCTCAGATTCCCAGGAACATAGGAAACAACACATTTAGCCCAACAACATGGGAGATTAAATTCCATCTCCCATTTGTTATAAGAGGCACCTACACACTGCAACTTGCCTTGGCCTCAGCTACTCGTTCTAACTTGGTGGTTCGGCTCAATAACCCTGTGGCTCGTCCTCCACACTTCTCAACGGGATTAATAGGCCGAGACAATTCCGTAGCAAGACATGGCATCCATGGATTGCACAGGCCTTACAGCATTGAAGTACCAAGCTATCTATTGGTGGAAGGAACCAACACCATCTATTTGAGGCAATCAAAAGGTCTAAGTCCTTTCCTAGGAGTTATGTATGACTACATCCGTTTGGAAAGACCTGAAACTTAG
Predicted protein sequences of Glyma.08g275600
>Glyma.08g275600.1.p sequence-type=predicted peptide transcript=Glyma.08g275600.1 locus=Glyma.08g275600 id=Glyma.08g275600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MENGIIRVSLSKPEGTVLGISYNGIDNVLERRNKFNNRGFHYMAIADDRQRVMPTAEDRSKGRRLDFDEAVLITNPSNPELQGEVDDKYQYSCENKDNKVHGWINLDSNSNESVGFWMITPSNEFRSGGPIKQGLTSHVGPTTLNILHTTHYSGKEVTMALKEGEPFKKVYGPVFAYLNSVSSGHDSQALWSDAVQQLSEEIKSWPYDFPNSEEFFPANKRGRVEGRLLVQDRYMFMNYLILFYKFYNDRKELMFLIFTSRHIQGGNFVYGDNAYVGLALPGDVGSWQRQSKGYQFWTEADKVGQFTIENILPGDYDLYAWVPGIFGDYKHNTTITITPGCVIQLGSLIYHPPRNGPTIWEIGIPDRSAAEFYVPDPYPNLINRLYIGKPAHKFRQYGLWQRYTELYPSQDLVYNVDVSNYSKDWFYAQIPRNIGNNTFSPTTWEIKFHLPFVIRGTYTLQLALASATRSNLVVRLNNPVARPPHFSTGLIGRDNSVARHGIHGLHRPYSIEVPSYLLVEGTNTIYLRQSKGLSPFLGVMYDYIRLERPET*

>Glyma.08g275600.2.p sequence-type=predicted peptide transcript=Glyma.08g275600.2 locus=Glyma.08g275600 id=Glyma.08g275600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAIADDRQRVMPTAEDRSKGRRLDFDEAVLITNPSNPELQGEVDDKYQYSCENKDNKVHGWINLDSNSNESVGFWMITPSNEFRSGGPIKQGLTSHVGPTTLNILHTTHYSGKEVTMALKEGEPFKKVYGPVFAYLNSVSSGHDSQALWSDAVQQLSEEIKSWPYDFPNSEEFFPANKRGRVEGRLLVQDRHIQGGNFVYGDNAYVGLALPGDVGSWQRQSKGYQFWTEADKVGQFTIENILPGDYDLYAWVPGIFGDYKHNTTITITPGCVIQLGSLIYHPPRNGPTIWEIGIPDRSAAEFYVPDPYPNLINRLYIGKPAHKFRQYGLWQRYTELYPSQDLVYNVDVSNYSKDWFYAQIPRNIGNNTFSPTTWEIKFHLPFVIRGTYTLQLALASATRSNLVVRLNNPVARPPHFSTGLIGRDNSVARHGIHGLHRPYSIEVPSYLLVEGTNTIYLRQSKGLSPFLGVMYDYIRLERPET*






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