Glyma.08g270900

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Report for Sequence Feature Glyma.08g270900

Feature Type:	gene_model
Chromosome:	Gm08
Start:	35277657
stop:	35283433
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g270900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G17910.1	AT	transferases, transferring acyl groups	JGI	N/A	IEA
GO:0006506	GO-bp	GPI anchor biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0006506	GO-bp	GPI anchor biosynthetic process	JGI	N/A	IEA
GO:0005789	GO-cc	endoplasmic reticulum membrane	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	JGI	N/A	IEA
GO:0016746	GO-mf	transferase activity, transferring acyl groups	EnsemblGenomes	N/A	IEA
GO:0016746	GO-mf	transferase activity, transferring acyl groups	JGI	N/A	IEA
KOG0411	KOG	Uncharacterized membrane protein	JGI	N/A	IEA
PTHR20661	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PF06423	PFAM	GWT1	JGI	N/A	IEA

Expression Patterns of Glyma.08g270900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g270900 not represented in the dataset	Glyma.08g270900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.08g270900

Paralog	Evidence	Comments
Glyma.01g095400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g270900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g36580	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g270900

Limit To All Plant Sequences

>Glyma.08g270900.2 sequence-type=transcript locus=Glyma.08g270900 ID=Glyma.08g270900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGTTGTTCACTTTAAAAAAGGAAGAATAATCATTCATTTGGAGATCTAGAAATCCAAAGGGTTCAAAATAAATCCAATTCATCGCTGCCATTCTAAGGGAAGGTAGTGCAGTCAGTGTGACTATTGTTCCCCGGTTCCGTTCTCAGTTTGTGTCTTTGAGCCAGAGTTGACCGTTGGATTTCATTCATGGATCTTCCTCTGCCTAAACCCTCCTTCAACCCCAACAAGCATCTCAAAGAAGAATTCGTAAGCAACTTGACCGGATCCTCCATGCTCGAAATCGCGACGCTTACAGTGTCTATTCCCATTCTGGTTCTTATTCGTCACTCCATTTCCATCACTGGTGCCTCACTGAAGAAGAAAAATGATGATGCGCCTTCGGGGAATAGGAATTTAAAATCATACCTAGCCACATTGTCTCTGGACTTCCTTGTCATTGTTGTTCCTATGCTCTTATTTTTCACCGTACTTGCAAACTGGACCTATTTCTTGGCAAGTTTGTTCACTATCTTAACATTGCTTTATATTGCAGTCAAGAGGTCTGGTGGTTCTTCTCCTTCTTTTGAAGGAGAGTCCAACTCTCTTCGGGCATATGTTACTTCATATAGGGTTATTGTGATGATTATAACATTCTTATGCATCTTGGCTGTTGACTTCAGAATATTTCCTAGAAGATATGCAAAGACTGAAACTTACGGAACTAGTTTGATGGATCTTGGGGTTGGAGCATTTGTTTTGGCAAATTCACTAGTTTCTCGGCAAGCACGTAATATCACATCGGTAAGCTGGAAGACTGCAATAGTTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGTTACTACGACTGGTGTGGATTATCAGGTACATGTGGGTGAATATGGTGTACATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTTCCCCTCAATATTCTGGAGTTATTGGTTCACTTGTACTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCATTACTTGCTTTCTAATGAAAGAGGAATGGATATCATAAGTCAAAACAAGGAGGGGATTTTTAGCATATTTGGATACTGGGGAATGTACCTTCTTGGTGTTCATTTGGGAAACTATCTTATCTTCGGAAGCCATTCCTCTGGATTTAGAAGTAGCAGATGGGTACGGATGAGGGTTTGGGTTCTCTCCATCCTGTTTTGGTTATTAACTGTGCTTCTAGACAGGCATGTCGAAAGAATTTCTCGGAGAACTTGCAATCTTCCATATGTTACTATGGTAGTGGCTGACAATCTACAGCTTATGCTGTCTCAATCTGTACCATAACCCAAATTTCCCAGCACGGCACTCTTGAGTTATCCTTGACATTCTGCTATCAATTCTAATGCTAGCCGATCTTGTTCCTGGAAGTAAAACTTCAATACTTGAAGAAGCATTCAATCGGAACCTACTGGCTACATTTCTACTGGCAAATATTCTCACTGGGTTGGTAAACTTGTCTGTTGATACCCTCTCTGCGTCATCAATCACTGCCTTTTTTATCTTGCTTGTCTATGCTTATGTTTTATCAATTGTAATTGGTATTGCAGATTATTTTGGTATTAAATTAAAATTTTGGTGATGCAGTCAATTGCTATGCTGCAGTAGTATGTTTTGTTAGTGTTATTATTTATTTTAAAAGAACATCTCTTTTTATTAATCATTAATTGAATTTACTAT

>Glyma.08g270900.3 sequence-type=transcript locus=Glyma.08g270900 ID=Glyma.08g270900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTAACATTGCTTTATATTGCTGTCAAGAGGTCTGGTGGTTCTTCTCCTTCTTTTGAAGGAGAGTCCAACTCTCTTCGGGCATATGTTACTTCATATAGGGTTATTGTGATGATTATAACATTCTTATGCATCTTGGCTGTTGACTTCAGAATATTTCCTAGAAGATATGCAAAGACTGAAACTTACGGAACTAGTTTGATGGATCTTGGGGTTGGAGCATTTGTTTTGGCAAATTCACTAGTTTCTCGGCAAGCACGTAATATCACATCGGTAAGCTGGAAGACTGCAATAGTTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGTTACTACGACTGGTGTGGATTATCAGGTACATGTGGGTGAATATGGTGTACATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTTCCCCTCAATATTCTGGAGTTATTGGTTCACTTGTACTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCATTACTTGCTTTCTAATGAAAGAGGAATGGATATCATAAGTCAAAACAAGGAGGGGATTTTTAGCATATTTGGATACTGGGGAATGTACCTTCTTGGTGTTCATTTGGGAAACTATCTTATCTTCGGAAGCCATTCCTCTGGATTTAGAAGTAGCAGATGGGTACGGATGAGGGTTTGGGTTCTCTCCATCCTGTTTTGGTTATTAACTGTGCTTCTAGACAGGCATGTCGAAAGAATTTCTCGGAGAACTTGCAATCTTCCATATGTTACTATGGTAGTGGCTGACAATCTACAGCTGCTATCAATTCTAATGCTAGCCGATCTTGTTCCTGGAAGTAAAACTTCAATACTTGAAGAAGCATTCAATCGGAACCTACTGGCTACATTTCTACTGGCAAATATTCTCACTGGGTTGGTAAACTTGTCTGTTGATACCCTCTCTGCGTCATCAATCACTGCCTTTTTTATCTTGCTTGTCTATGCTTATGTTTTATCAATTGTAATTGGTATTGCAGATTATTTTGGTATTAAATTAAAATTTTGGTGATGCAGTCAATTGCTATGCTGCAGTAGTATGTTTTGTTAGTGTTATTATTTATTTTAAAAGAACATCTCTTTTTATTAATCATTAATTGAATTTACTAT

Coding sequences of Glyma.08g270900

Limit To All Plant Sequences

>Glyma.08g270900.1 sequence-type=CDS polypeptide=Glyma.08g270900.1.p locus=Glyma.08g270900 ID=Glyma.08g270900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCTTCCTCTGCCTAAACCCTCCTTCAACCCCAACAAGCATCTCAAAGAAGAATTCGTAAGCAACTTGACCGGATCCTCCATGCTCGAAATCGCGACGCTTACAGTGTCTATTCCCATTCTGGTTCTTATTCGTCACTCCATTTCCATCACTGGTGCCTCACTGAAGAAGAAAAATGATGATGCGCCTTCGGGGAATAGGAATTTAAAATCATACCTAGCCACATTGTCTCTGGACTTCCTTGTCATTGTTGTTCCTATGCTCTTATTTTTCACCGTACTTGCAAACTGGACCTATTTCTTGGCAAGTTTGTTCACTATCTTAACATTGCTTTATATTGCAGTCAAGAGGTCTGGTGGTTCTTCTCCTTCTTTTGAAGGAGAGTCCAACTCTCTTCGGGCATATGTTACTTCATATAGGGTTATTGTGATGATTATAACATTCTTATGCATCTTGGCTGTTGACTTCAGAATATTTCCTAGAAGATATGCAAAGACTGAAACTTACGGAACTAGTTTGATGGATCTTGGGGTTGGAGCATTTGTTTTGGCAAATTCACTAGTTTCTCGGCAAGCACGTAATATCACATCGGTAAGCTGGAAGACTGCAATAGTTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGTTACTACGACTGGTGTGGATTATCAGGTACATGTGGGTGAATATGGTGTACATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTTCCCCTCAATATTCTGGAGTTATTGGTTCACTTGTACTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCATTACTTGCTTTCTAATGAAAGAGGAATGGATATCATAAGTCAAAACAAGGAGGGGATTTTTAGCATATTTGGATACTGGGGAATGTACCTTCTTGGTGTTCATTTGGGAAACTATCTTATCTTCGGAAGCCATTCCTCTGGATTTAGAAGTAGCAGATGGGTACGGATGAGGGTTTGGGTTCTCTCCATCCTGTTTTGGTTATTAACTGTGCTTCTAGACAGGCATGTCGAAAGAATTTCTCGGAGAACTTGCAATCTTCCATATGTTACTATGGTAGTGGCTGACAATCTACAGCTGCTATCAATTCTAATGCTAGCCGATCTTGTTCCTGGAAGTAAAACTTCAATACTTGAAGAAGCATTCAATCGGAACCTACTGGCTACATTTCTACTGGCAAATATTCTCACTGGGTTGGTAAACTTGTCTGTTGATACCCTCTCTGCGTCATCAATCACTGCCTTTTTTATCTTGCTTGTCTATGCTTATGTTTTATCAATTGTAATTGGTATTGCAGATTATTTTGGTATTAAATTAAAATTTTGGTGA

>Glyma.08g270900.2 sequence-type=CDS polypeptide=Glyma.08g270900.2.p locus=Glyma.08g270900 ID=Glyma.08g270900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCTTCCTCTGCCTAAACCCTCCTTCAACCCCAACAAGCATCTCAAAGAAGAATTCGTAAGCAACTTGACCGGATCCTCCATGCTCGAAATCGCGACGCTTACAGTGTCTATTCCCATTCTGGTTCTTATTCGTCACTCCATTTCCATCACTGGTGCCTCACTGAAGAAGAAAAATGATGATGCGCCTTCGGGGAATAGGAATTTAAAATCATACCTAGCCACATTGTCTCTGGACTTCCTTGTCATTGTTGTTCCTATGCTCTTATTTTTCACCGTACTTGCAAACTGGACCTATTTCTTGGCAAGTTTGTTCACTATCTTAACATTGCTTTATATTGCAGTCAAGAGGTCTGGTGGTTCTTCTCCTTCTTTTGAAGGAGAGTCCAACTCTCTTCGGGCATATGTTACTTCATATAGGGTTATTGTGATGATTATAACATTCTTATGCATCTTGGCTGTTGACTTCAGAATATTTCCTAGAAGATATGCAAAGACTGAAACTTACGGAACTAGTTTGATGGATCTTGGGGTTGGAGCATTTGTTTTGGCAAATTCACTAGTTTCTCGGCAAGCACGTAATATCACATCGGTAAGCTGGAAGACTGCAATAGTTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGTTACTACGACTGGTGTGGATTATCAGGTACATGTGGGTGAATATGGTGTACATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTTCCCCTCAATATTCTGGAGTTATTGGTTCACTTGTACTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCATTACTTGCTTTCTAATGAAAGAGGAATGGATATCATAAGTCAAAACAAGGAGGGGATTTTTAGCATATTTGGATACTGGGGAATGTACCTTCTTGGTGTTCATTTGGGAAACTATCTTATCTTCGGAAGCCATTCCTCTGGATTTAGAAGTAGCAGATGGGTACGGATGAGGGTTTGGGTTCTCTCCATCCTGTTTTGGTTATTAACTGTGCTTCTAGACAGGCATGTCGAAAGAATTTCTCGGAGAACTTGCAATCTTCCATATGTTACTATGGTAGTGGCTGACAATCTACAGCTTATGCTGTCTCAATCTGTACCATAA

>Glyma.08g270900.3 sequence-type=CDS polypeptide=Glyma.08g270900.3.p locus=Glyma.08g270900 ID=Glyma.08g270900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTATAACATTCTTATGCATCTTGGCTGTTGACTTCAGAATATTTCCTAGAAGATATGCAAAGACTGAAACTTACGGAACTAGTTTGATGGATCTTGGGGTTGGAGCATTTGTTTTGGCAAATTCACTAGTTTCTCGGCAAGCACGTAATATCACATCGGTAAGCTGGAAGACTGCAATAGTTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGTTACTACGACTGGTGTGGATTATCAGGTACATGTGGGTGAATATGGTGTACATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTTCCCCTCAATATTCTGGAGTTATTGGTTCACTTGTACTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCATTACTTGCTTTCTAATGAAAGAGGAATGGATATCATAAGTCAAAACAAGGAGGGGATTTTTAGCATATTTGGATACTGGGGAATGTACCTTCTTGGTGTTCATTTGGGAAACTATCTTATCTTCGGAAGCCATTCCTCTGGATTTAGAAGTAGCAGATGGGTACGGATGAGGGTTTGGGTTCTCTCCATCCTGTTTTGGTTATTAACTGTGCTTCTAGACAGGCATGTCGAAAGAATTTCTCGGAGAACTTGCAATCTTCCATATGTTACTATGGTAGTGGCTGACAATCTACAGCTGCTATCAATTCTAATGCTAGCCGATCTTGTTCCTGGAAGTAAAACTTCAATACTTGAAGAAGCATTCAATCGGAACCTACTGGCTACATTTCTACTGGCAAATATTCTCACTGGGTTGGTAAACTTGTCTGTTGATACCCTCTCTGCGTCATCAATCACTGCCTTTTTTATCTTGCTTGTCTATGCTTATGTTTTATCAATTGTAATTGGTATTGCAGATTATTTTGGTATTAAATTAAAATTTTGGTGA

Predicted protein sequences of Glyma.08g270900

Limit To All Plant Sequences

>Glyma.08g270900.1.p sequence-type=predicted peptide transcript=Glyma.08g270900.1 locus=Glyma.08g270900 ID=Glyma.08g270900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDLPLPKPSFNPNKHLKEEFVSNLTGSSMLEIATLTVSIPILVLIRHSISITGASLKKKNDDAPSGNRNLKSYLATLSLDFLVIVVPMLLFFTVLANWTYFLASLFTILTLLYIAVKRSGGSSPSFEGESNSLRAYVTSYRVIVMIITFLCILAVDFRIFPRRYAKTETYGTSLMDLGVGAFVLANSLVSRQARNITSVSWKTAIVSTSPLIILGFLRLVTTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSFINISPQYSGVIGSLVLVGYQFCLVQGLNHYLLSNERGMDIISQNKEGIFSIFGYWGMYLLGVHLGNYLIFGSHSSGFRSSRWVRMRVWVLSILFWLLTVLLDRHVERISRRTCNLPYVTMVVADNLQLLSILMLADLVPGSKTSILEEAFNRNLLATFLLANILTGLVNLSVDTLSASSITAFFILLVYAYVLSIVIGIADYFGIKLKFW*

>Glyma.08g270900.2.p sequence-type=predicted peptide transcript=Glyma.08g270900.2 locus=Glyma.08g270900 ID=Glyma.08g270900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDLPLPKPSFNPNKHLKEEFVSNLTGSSMLEIATLTVSIPILVLIRHSISITGASLKKKNDDAPSGNRNLKSYLATLSLDFLVIVVPMLLFFTVLANWTYFLASLFTILTLLYIAVKRSGGSSPSFEGESNSLRAYVTSYRVIVMIITFLCILAVDFRIFPRRYAKTETYGTSLMDLGVGAFVLANSLVSRQARNITSVSWKTAIVSTSPLIILGFLRLVTTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSFINISPQYSGVIGSLVLVGYQFCLVQGLNHYLLSNERGMDIISQNKEGIFSIFGYWGMYLLGVHLGNYLIFGSHSSGFRSSRWVRMRVWVLSILFWLLTVLLDRHVERISRRTCNLPYVTMVVADNLQLMLSQSVP*

>Glyma.08g270900.3.p sequence-type=predicted peptide transcript=Glyma.08g270900.3 locus=Glyma.08g270900 ID=Glyma.08g270900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MIITFLCILAVDFRIFPRRYAKTETYGTSLMDLGVGAFVLANSLVSRQARNITSVSWKTAIVSTSPLIILGFLRLVTTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSFINISPQYSGVIGSLVLVGYQFCLVQGLNHYLLSNERGMDIISQNKEGIFSIFGYWGMYLLGVHLGNYLIFGSHSSGFRSSRWVRMRVWVLSILFWLLTVLLDRHVERISRRTCNLPYVTMVVADNLQLLSILMLADLVPGSKTSILEEAFNRNLLATFLLANILTGLVNLSVDTLSASSITAFFILLVYAYVLSIVIGIADYFGIKLKFW*

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