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Report for Sequence Feature Glyma.08g268900

Feature Type:gene_model
Chromosome:Gm08
Start:34656620
stop:34664578
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g268900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G68710.1AT ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein JGI N/AIEA
GO:0015914GO-bp phospholipid transport EnsemblGenomesN/AIEA
GO:0045332GO-bp phospholipid translocation EnsemblGenomesN/AIEA
GO:0048194GO-bp Golgi vesicle budding EnsemblGenomesN/AIEA
GO:0000139GO-cc Golgi membrane EnsemblGenomesN/AIEA
GO:0005802GO-cc trans-Golgi network EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding JGI N/AIEA
GO:0000287GO-mf magnesium ion binding EnsemblGenomesN/AIEA
GO:0004012GO-mf phospholipid-translocating ATPase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
KOG0206 KOG P-type ATPase JGI N/AIEA
PTHR24092Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24092:SF18Panther JGI N/AIEA
PF00122PFAM E1-E2 ATPase JGI N/AIEA
PF00702PFAM haloacid dehalogenase-like hydrolase JGI N/AIEA

Expression Patterns of Glyma.08g268900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g268900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g36270 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g268900
>Glyma.08g268900.1 sequence-type=CDS polypeptide=Glyma.08g268900.1.p locus=Glyma.08g268900 ID=Glyma.08g268900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGGTGGAAGGAGGAGGAAGCTGCTTTTAAGCAAGATCTACTCATTTGCATGCTGTAAGGCATCTTTTGAGGGAGATCATCATTATTCACAGATTGGAGGAAAAGGTTATTCCAGAGTGGTGTTCTGCAATGAGCCATATACTTTTGTTGAGGATGGTGTTAAGAATTTTGCAGACAATTCTGTGAGATCTACAAAATACACTCTTGCCACTTTCTTTCCCAAATCATTGTTTGAACAGTTTAGGAGAGTGGCAAACTTCTATTTTTTGGTCACTGGCATCTTGGCCTTCACAAAACTTGCTCCATACACTGCTGTCACTGCTATCCTTCCACTGATTATTGTTATTGGGGCCACCATGGTGAAAGAAGGTATTGAAGACTGGCACCGGAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATAAAGCTGATGATACTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAAGTTGAGAAGGATGAGTTCTTCCCAGCTGACCTCCTGTTACTTTCATCCAGTTATGAGGATGGAGTTTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACTTCTTCCTTACAGGAGGATCTCAACTTCCTAAAGTTTAAAGCTACAGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTTGGGAGCATGGAGTTTGAAGAGAAAAATTATGCCCTTTCTCATCAGCAACTTCTTCTCCGAGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCAGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATTGAGAAAAAGATGGACAGAGTCATCTATTTCTTGTTTTGTATTTTATTCCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTATAACTAAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCAGATGGTTCTACTATTTTCTTTGATCCGAATAGACCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCTCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACATTACTTTCTGATAAGACTGGAACTTTGACCTGCAACTCAATGGAGTTCATTAAATGTTCTATTGCTGGGTTAGCTTATGGCCATGGTGCTACAGAGGTTGAGAAGGCCATGGATAGAAGAAAAGCTTCACCATCAATTTATGAGCATGATATTGAATCAGAAGCAGATAACATTAGGGGTTTGCTCGATAAAAGGGTACTCATTAAAGGTTTTAACTTTGCTGACGAAAGAATAACAAATGGAAATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGCAGTCTGTCATACAGCCATACCCGAAGTGGATGAAGGCACAGGAAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGGTCAGACTAGTTTATCGACATATGAGCTGGATCCAGTTTCTCACAAGAAAGTTGAAAGGAAATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTTTCTGCAAAGGTGCAGACAGCACCATGTTTGAAAGGCTTGCCAAGAATAGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCGGGTCTGAGAACCCTTATACTGGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAGTAAATTCTCTAGGGCCAAGAATGTAGTCAGTGCTGATCAGGATATAATGATTGAGGAAGTATCAGATAAGATTGAGAAGAACCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGAATGCATTGACAAGCTTGCCCAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTGTAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGAGACAAGATGGCTATTGCCAAGGCATCAATGCAAAGTGTCCACCTTCAGATATCTGAAGGTGCTGCACAACTCACTGCGTATAGAGGGAGCTCTCATCAGGCATTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCATTAGAAGATAATATGAAGAACTTGTTTCTGGAGCTTGCGATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAGGCACTGGTCGCTAGATTGGTCAAATCTGGAGCTGGGAAAACAACATTAGCTATTGGTGATGGAGCCAACGATGTGGGAATGCTTCAAGAAGCGGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCAGGTATTTGGAACGGTTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCGTTCTCTGGACAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTTTTTTCATCACTTCCTGTGATTGCACTTGGAGTATTTGATCAGGATGTATCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTACATCAAGAAGGAGTACAGAATGTTCTTTTCAGCTGGCATCGAATACTCAGTTGGATGCTTAATGGATTTATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGTGGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGCAACAATGTATACTTGTGTAGTTTGGGTTGTAAACTTGCAAGTGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTCTGGTATCTTTTTCTCCTGGTATATGGAGCAATGCCTCCACACTTTTCTACAAATGCTTACAAAGTCTTCGTTGAAGCTCTTGCTCCTTCCCCTACCTATTGGATTGTTACATTCTTTGTGGTGATCTCAACCCTTATACCATACTTCTCATACGCAGCAATTCAGATGCGGTTCTTTCCCATGTATCATGAAATAGTGCAATGGATAAGGTATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGCTATGGTGCGGCTGAAATCATTGCAGCCAACAACTGTTGGTTCAACAGCACGCTTAGCTGCTAAGTCTCACCACGCTAGAGACAAATGTTAA
Predicted protein sequences of Glyma.08g268900
>Glyma.08g268900.1.p sequence-type=predicted peptide transcript=Glyma.08g268900.1 locus=Glyma.08g268900 ID=Glyma.08g268900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGGRRRKLLLSKIYSFACCKASFEGDHHYSQIGGKGYSRVVFCNEPYTFVEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVTAILPLIIVIGATMVKEGIEDWHRKKQDIEVNNRRVKVHKADDTFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKQGLEVTSSLQEDLNFLKFKATVKCEDPNANLYSFVGSMEFEEKNYALSHQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGIITKDDFQNGLMKRWYLRPDGSTIFFDPNRPAAAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTLLSDKTGTLTCNSMEFIKCSIAGLAYGHGATEVEKAMDRRKASPSIYEHDIESEADNIRGLLDKRVLIKGFNFADERITNGNWVNEPHADVIQKFFRLLAVCHTAIPEVDEGTGNVSYEAESPDEAAFVIAARELGFEFYKRGQTSLSTYELDPVSHKKVERKYKLLNVLEFNSSRKRMSVIVEDEEGKILLFCKGADSTMFERLAKNRREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDSKFSRAKNVVSADQDIMIEEVSDKIEKNLILLGATAVEDKLQDGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIVIHLDSPEIQALEKDGDKMAIAKASMQSVHLQISEGAAQLTAYRGSSHQAFALIIDGKSLVYALEDNMKNLFLELAIRCASVICCRSSPKQKALVARLVKSGAGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLHQEGVQNVLFSWHRILSWMLNGFISAIIIFFFCTKAMELQAFDVEGRTAGKDILGATMYTCVVWVVNLQVALAISYFTMIQHFFIWGSILFWYLFLLVYGAMPPHFSTNAYKVFVEALAPSPTYWIVTFFVVISTLIPYFSYAAIQMRFFPMYHEIVQWIRYEGKIKDPEFCAMVRLKSLQPTTVGSTARLAAKSHHARDKC*






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