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Report for Sequence Feature Glyma.08g261500

Feature Type:gene_model
Chromosome:Gm08
Start:25674085
stop:25676624
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g261500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G68550.1AT Integrase-type DNA-binding superfamily protein JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0003700GO-mf DNA binding transcription factor activity EnsemblGenomesN/AIEA
GO:0003700GO-mf sequence-specific DNA binding transcription factor activity JGI N/AIEA
PF00847PFAM AP2 domain JGI N/AIEA

Proteins Associated with Glyma.08g261500
LocusGene SymbolProtein Name
ERF64 Ethylene-responsive factor gene 64

Expression Patterns of Glyma.08g261500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g261500 not represented in the dataset
Glyma.08g261500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g261500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g30716 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g261500
>Glyma.08g261500.2 sequence-type=transcript locus=Glyma.08g261500 ID=Glyma.08g261500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCGTTCATCACACAAAGTGATGATGCAAAATGAAAACGGTGAGTGCGTGGCGCATGAAACCGCagaaaaatagaggagagagagaataaacagaagagagtgaaagagTCTTTCAGTGTGAAACAACTGAAAAACAGAGAAAGCGACAGGGCAGAGAAAAAGAGGTTCCAAAGCAGCCACCATAACAGTGAATACACATAGTTACAAAACAAGCATAAGTGATTGGAGCTTTGTTGAAGCTCGGGTTCGGTTACGCTTGTGTTTGCTGCATGCTACTCTGGTTGGTGTTGAATTCTGCTGTTTCGATGAGTTTGAGGTCAAAAAGGACATGTTATGGAATTCTGGTTTGTTATGGAGGCTTTCAGATAAAAAAATTCTCTGCTTTCTTCCTCCTTTGGAGAGTGGATCTCACTTGATGTTCTTGAAATTATGAGGGATTTTTTTTTTGGTTTATTAAAAAAAATTATTTTGTTTTGTTGAACAATTTTTCTGGGTATTTTGAGGGGTTTTGACCCAATTTTTTTTACCATGGTGGAGCCTCTTAATCAATCGACTCCTAGGACGAAAAAAATGAAACACAAGCGAAATCCGATTCATGACTCGAAAATGACGAGGAAACTGCGCATCATTTGCAATGATCCTGATGCTACTGACTCTTCATCTGATGAGGATGAGTATTTTGGGAATGTTAGGAAGATGAAGAGAACTGTGCTTGAGATTGCTCTTCCACCTGTTCCGGTTAACCCTGTGGTTGCAGATGAAACTAGTACTGAGAGCACAAACAATGATGAATTGAACCAGACGAAGAGGGTTATGGCGAAAACCCCCTCAGTGAAGAGGCAATCTTGTGGGAAATACAAAGGTGTTCGGATGCGGAAATGGGGCAAATGGGCCGCGGAGATTCGTGACCCTTTCAAGGGCACGCGAATCTGGTTGGGCACTTTCAGCACTGCAGAAGAGGCTTCTCAAGCCTATGAGACCAGAAGGCTTGAGTTTGAGGTCATGGCCAAGGCTCTATCTGATGAGAAGAGCAACAATGGCAGCAGCAACAACAATGTTGTTGCTTCTGCTGAAACTGAAACTGTGGCTGCCCCTGAAAATAACAGTTCAAACTATTATGTTTCTTCTGCTGCAGGTTCTGTATCAGACTCCAAGTCTGCTTTTATGGATGAATCAGAGAGTGTGTTGTCACACACATCACCATCTTCTGTGCTTGAATTGGATACATCTGCTTCCAATTTGATTGGGAGTGGTAAGGTTTCAAGCAATGAAATTGTTGAGACTAAAGGGTTGGAGGCCGAAGTTGCTGAGACTAAAAGTTTGGCAGCTGAATTTGCCGAGCTGGAAATCCAAGATTTGAGTATGCTGAATGTACCATCCCCATCTGCTGTTGCTGCTGCTACGTCTGAGTATGAATTGGATTTGTTGGCATTTGACAGTTTCAAAtatggatttgattatgaacatggctttgatgatgattttgCTGCCCTGGAAGACATTCACATTTGCAGTTTTGATGATAATGAGCCTAGCGAGCTTCCTGATTACGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAATATACCTTGCGTATAGATTTTGCAGCTACATAGGAATGAGTTCTATCCAAGAGAATTACAAGTTTTGTGTCATTGCTTAAAAATGCTCTACAGTTTTGTGAGATCTCAGGAAAAAACTAGTTCCTGGGGGTGTTGTTTTGTTTTAATTTATTTGTTTCTTTAGGGAGATGGAAGATCAATGAGAGGTTAAGAGAGAATGCCTTGGTTTTCCTTGTGCTATTAGAGCCGTCCAAGGGTTTTTCAATTTCTATTATCATGAAAGTTCTGAGTGTGTAGAAGTCTATCAAACTTGAATTCTATTATCTTTATGAAAAATTCTATGGTATCCTTGGAAATTTAAAGGTTTTGGTACTGTTGTTGAAAATGCTCTCTCC

>Glyma.08g261500.3 sequence-type=transcript locus=Glyma.08g261500 ID=Glyma.08g261500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATCTTGGCCATAGATTTGTAATCTTTTCATCTCAAAAAATTTCTCGTGCTGTTGTGTCTCTATATATACTGTGCAACTCCATCTCTTACGGTTTCTCTCTTGTTGGTCAGAGGGAGAGTAGTGTGTGTGTGTGTTTTTTGTTTGGATTTCTATGAGGAATCCATTGAAGGAGGAAGAACAGGAGATTTATGTCGTCTTGGTTTTATTTGGAAGTAGTGATTGGAGCTTTGTTGAAGCTCGGGTTCGGTTACGCTTGTGTTTGCTGCATGCTACTCTGGTTGGTGTTGAATTCTGCTGTTTCGATGAGTTTGAGGTCAAAAAGGACATGTTATGGAATTCTGGTTTGTTATGGAGGCTTTCAGATAAAAAAATTCTCTGCTTTCTTCCTCCTTTGGAGAGTGGATCTCACTTGATGTTCTTGAAATTATGAGGGATTTTTTTTTTGGTTTATTAAAAAAAATTATTTTGTTTTGTTGAACAATTTTTCTGGGTATTTTGAGGGGTTTTGACCCAATTTTTTTTACCATGGTGGAGCCTCTTAATCAATCGACTCCTAGGACGAAAAAAATGAAACACAAGCGAAATCCGATTCATGACTCGAAAATGACGAGGAAACTGCGCATCATTTGCAATGATCCTGATGCTACTGACTCTTCATCTGATGAGGATGAGTATTTTGGGAATGTTAGGAAGATGAAGAGAACTGTGCTTGAGATTGCTCTTCCACCTGTTCCGGTTAACCCTGTGGTTGCAGATGAAACTAGTACTGAGAGCACAAACAATGATGAATTGAACCAGACGAAGAGGGTTATGGCGAAAACCCCCTCAGTGAAGAGGCAATCTTGTGGGAAATACAAAGGTGTTCGGATGCGGAAATGGGGCAAATGGGCCGCGGAGATTCGTGACCCTTTCAAGGGCACGCGAATCTGGTTGGGCACTTTCAGCACTGCAGAAGAGGCTTCTCAAGCCTATGAGACCAGAAGGCTTGAGTTTGAGGTCATGGCCAAGGCTCTATCTGATGAGAAGAGCAACAATGGCAGCAGCAACAACAATGTTGTTGCTTCTGCTGAAACTGAAACTGTGGCTGCCCCTGAAAATAACAGTTCAAACTATTATGTTTCTTCTGCTGCAGGTTCTGTATCAGACTCCAAGTCTGCTTTTATGGATGAATCAGAGAGTGTGTTGTCACACACATCACCATCTTCTGTGCTTGAATTGGATACATCTGCTTCCAATTTGATTGGGAGTGGTAAGGTTTCAAGCAATGAAATTGTTGAGACTAAAGGGTTGGAGGCCGAAGTTGCTGAGACTAAAAGTTTGGCAGCTGAATTTGCCGAGCTGGAAATCCAAGATTTGAGTATGCTGAATGTACCATCCCCATCTGCTGTTGCTGCTGCTACGTCTGAGTATGAATTGGATTTGTTGGCATTTGACAGTTTCAAAtatggatttgattatgaacatggctttgatgatgattttgCTGCCCTGGAAGACATTCACATTTGCAGTTTTGATGATAATGAGCCTAGCGAGCTTCCTGATTACGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAATATACCTTGCGTATAGATTTTGCAGCTACATAGGAATGAGTTCTATCCAAGAGAATTACAAGTTTTGTGTCATTGCTTAAAAATGCTCTACAGTTTTGTGAGATCTCAGGAAAAAACTAGTTCCTGGGGGTGTTGTTTTGTTTTAATTTATTTGTTTCTTTAGGGAGATGGAAGATCAATGAGAGGTTAAGAGAGAATGCCTTGGTTTTCCTTGTGCTATTAGAGCCGTCCAAGGGTTTTTCAATTTCTATTATCATGAAAGTTCTGAGTGTGTAGAAGTCTATCAAACTTGAATTCTATTATCTTTATGAAAAATTCTATGGTATCCTTGGAAATTTAAAGGTTTTGGTACTGTTGTTGAAAATGCTCTCTCC
Coding sequences of Glyma.08g261500
>Glyma.08g261500.1 sequence-type=CDS polypeptide=Glyma.08g261500.1.p locus=Glyma.08g261500 ID=Glyma.08g261500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGCCTCTTAATCAATCGACTCCTAGGACGAAAAAAATGAAACACAAGCGAAATCCGATTCATGACTCGAAAATGACGAGGAAACTGCGCATCATTTGCAATGATCCTGATGCTACTGACTCTTCATCTGATGAGGATGAGTATTTTGGGAATGTTAGGAAGATGAAGAGAACTGTGCTTGAGATTGCTCTTCCACCTGTTCCGGTTAACCCTGTGGTTGCAGATGAAACTAGTACTGAGAGCACAAACAATGATGAATTGAACCAGACGAAGAGGGTTATGGCGAAAACCCCCTCAGTGAAGAGGCAATCTTGTGGGAAATACAAAGGTGTTCGGATGCGGAAATGGGGCAAATGGGCCGCGGAGATTCGTGACCCTTTCAAGGGCACGCGAATCTGGTTGGGCACTTTCAGCACTGCAGAAGAGGCTTCTCAAGCCTATGAGACCAGAAGGCTTGAGTTTGAGGTCATGGCCAAGGCTCTATCTGATGAGAAGAGCAACAATGGCAGCAGCAACAACAATGTTGTTGCTTCTGCTGAAACTGAAACTGTGGCTGCCCCTGAAAATAACAGTTCAAACTATTATGTTTCTTCTGCTGCAGGTTCTGTATCAGACTCCAAGTCTGCTTTTATGGATGAATCAGAGAGTGTGTTGTCACACACATCACCATCTTCTGTGCTTGAATTGGATACATCTGCTTCCAATTTGATTGGGAGTGGTAAGGTTTCAAGCAATGAAATTGTTGAGACTAAAGGGTTGGAGGCCGAAGTTGCTGAGACTAAAAGTTTGGCAGCTGAATTTGCCGAGCTGGAAATCCAAGATTTGAGTATGCTGAATGTACCATCCCCATCTGCTGTTGCTGCTGCTACGTCTGAGTATGAATTGGATTTGTTGGCATTTGACAGTTTCAAATATGGATTTGATTATGAACATGGCTTTGATGATGATTTTGCTGCCCTGGAAGACATTCACATTTGCAGTTTTGATGATAATGAGCCTAGCGAGCTTCCTGATTACGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAATATACCTTGCGTATAG

>Glyma.08g261500.2 sequence-type=CDS polypeptide=Glyma.08g261500.2.p locus=Glyma.08g261500 ID=Glyma.08g261500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGCCTCTTAATCAATCGACTCCTAGGACGAAAAAAATGAAACACAAGCGAAATCCGATTCATGACTCGAAAATGACGAGGAAACTGCGCATCATTTGCAATGATCCTGATGCTACTGACTCTTCATCTGATGAGGATGAGTATTTTGGGAATGTTAGGAAGATGAAGAGAACTGTGCTTGAGATTGCTCTTCCACCTGTTCCGGTTAACCCTGTGGTTGCAGATGAAACTAGTACTGAGAGCACAAACAATGATGAATTGAACCAGACGAAGAGGGTTATGGCGAAAACCCCCTCAGTGAAGAGGCAATCTTGTGGGAAATACAAAGGTGTTCGGATGCGGAAATGGGGCAAATGGGCCGCGGAGATTCGTGACCCTTTCAAGGGCACGCGAATCTGGTTGGGCACTTTCAGCACTGCAGAAGAGGCTTCTCAAGCCTATGAGACCAGAAGGCTTGAGTTTGAGGTCATGGCCAAGGCTCTATCTGATGAGAAGAGCAACAATGGCAGCAGCAACAACAATGTTGTTGCTTCTGCTGAAACTGAAACTGTGGCTGCCCCTGAAAATAACAGTTCAAACTATTATGTTTCTTCTGCTGCAGGTTCTGTATCAGACTCCAAGTCTGCTTTTATGGATGAATCAGAGAGTGTGTTGTCACACACATCACCATCTTCTGTGCTTGAATTGGATACATCTGCTTCCAATTTGATTGGGAGTGGTAAGGTTTCAAGCAATGAAATTGTTGAGACTAAAGGGTTGGAGGCCGAAGTTGCTGAGACTAAAAGTTTGGCAGCTGAATTTGCCGAGCTGGAAATCCAAGATTTGAGTATGCTGAATGTACCATCCCCATCTGCTGTTGCTGCTGCTACGTCTGAGTATGAATTGGATTTGTTGGCATTTGACAGTTTCAAATATGGATTTGATTATGAACATGGCTTTGATGATGATTTTGCTGCCCTGGAAGACATTCACATTTGCAGTTTTGATGATAATGAGCCTAGCGAGCTTCCTGATTACGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAATATACCTTGCGTATAG

>Glyma.08g261500.3 sequence-type=CDS polypeptide=Glyma.08g261500.3.p locus=Glyma.08g261500 ID=Glyma.08g261500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAGCCTCTTAATCAATCGACTCCTAGGACGAAAAAAATGAAACACAAGCGAAATCCGATTCATGACTCGAAAATGACGAGGAAACTGCGCATCATTTGCAATGATCCTGATGCTACTGACTCTTCATCTGATGAGGATGAGTATTTTGGGAATGTTAGGAAGATGAAGAGAACTGTGCTTGAGATTGCTCTTCCACCTGTTCCGGTTAACCCTGTGGTTGCAGATGAAACTAGTACTGAGAGCACAAACAATGATGAATTGAACCAGACGAAGAGGGTTATGGCGAAAACCCCCTCAGTGAAGAGGCAATCTTGTGGGAAATACAAAGGTGTTCGGATGCGGAAATGGGGCAAATGGGCCGCGGAGATTCGTGACCCTTTCAAGGGCACGCGAATCTGGTTGGGCACTTTCAGCACTGCAGAAGAGGCTTCTCAAGCCTATGAGACCAGAAGGCTTGAGTTTGAGGTCATGGCCAAGGCTCTATCTGATGAGAAGAGCAACAATGGCAGCAGCAACAACAATGTTGTTGCTTCTGCTGAAACTGAAACTGTGGCTGCCCCTGAAAATAACAGTTCAAACTATTATGTTTCTTCTGCTGCAGGTTCTGTATCAGACTCCAAGTCTGCTTTTATGGATGAATCAGAGAGTGTGTTGTCACACACATCACCATCTTCTGTGCTTGAATTGGATACATCTGCTTCCAATTTGATTGGGAGTGGTAAGGTTTCAAGCAATGAAATTGTTGAGACTAAAGGGTTGGAGGCCGAAGTTGCTGAGACTAAAAGTTTGGCAGCTGAATTTGCCGAGCTGGAAATCCAAGATTTGAGTATGCTGAATGTACCATCCCCATCTGCTGTTGCTGCTGCTACGTCTGAGTATGAATTGGATTTGTTGGCATTTGACAGTTTCAAATATGGATTTGATTATGAACATGGCTTTGATGATGATTTTGCTGCCCTGGAAGACATTCACATTTGCAGTTTTGATGATAATGAGCCTAGCGAGCTTCCTGATTACGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAATATACCTTGCGTATAG
Predicted protein sequences of Glyma.08g261500
>Glyma.08g261500.1.p sequence-type=predicted peptide transcript=Glyma.08g261500.1 locus=Glyma.08g261500 ID=Glyma.08g261500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEPLNQSTPRTKKMKHKRNPIHDSKMTRKLRIICNDPDATDSSSDEDEYFGNVRKMKRTVLEIALPPVPVNPVVADETSTESTNNDELNQTKRVMAKTPSVKRQSCGKYKGVRMRKWGKWAAEIRDPFKGTRIWLGTFSTAEEASQAYETRRLEFEVMAKALSDEKSNNGSSNNNVVASAETETVAAPENNSSNYYVSSAAGSVSDSKSAFMDESESVLSHTSPSSVLELDTSASNLIGSGKVSSNEIVETKGLEAEVAETKSLAAEFAELEIQDLSMLNVPSPSAVAAATSEYELDLLAFDSFKYGFDYEHGFDDDFAALEDIHICSFDDNEPSELPDYDFDDFGADEFAGWIEEPLNIPCV*

>Glyma.08g261500.2.p sequence-type=predicted peptide transcript=Glyma.08g261500.2 locus=Glyma.08g261500 ID=Glyma.08g261500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEPLNQSTPRTKKMKHKRNPIHDSKMTRKLRIICNDPDATDSSSDEDEYFGNVRKMKRTVLEIALPPVPVNPVVADETSTESTNNDELNQTKRVMAKTPSVKRQSCGKYKGVRMRKWGKWAAEIRDPFKGTRIWLGTFSTAEEASQAYETRRLEFEVMAKALSDEKSNNGSSNNNVVASAETETVAAPENNSSNYYVSSAAGSVSDSKSAFMDESESVLSHTSPSSVLELDTSASNLIGSGKVSSNEIVETKGLEAEVAETKSLAAEFAELEIQDLSMLNVPSPSAVAAATSEYELDLLAFDSFKYGFDYEHGFDDDFAALEDIHICSFDDNEPSELPDYDFDDFGADEFAGWIEEPLNIPCV*

>Glyma.08g261500.3.p sequence-type=predicted peptide transcript=Glyma.08g261500.3 locus=Glyma.08g261500 ID=Glyma.08g261500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEPLNQSTPRTKKMKHKRNPIHDSKMTRKLRIICNDPDATDSSSDEDEYFGNVRKMKRTVLEIALPPVPVNPVVADETSTESTNNDELNQTKRVMAKTPSVKRQSCGKYKGVRMRKWGKWAAEIRDPFKGTRIWLGTFSTAEEASQAYETRRLEFEVMAKALSDEKSNNGSSNNNVVASAETETVAAPENNSSNYYVSSAAGSVSDSKSAFMDESESVLSHTSPSSVLELDTSASNLIGSGKVSSNEIVETKGLEAEVAETKSLAAEFAELEIQDLSMLNVPSPSAVAAATSEYELDLLAFDSFKYGFDYEHGFDDDFAALEDIHICSFDDNEPSELPDYDFDDFGADEFAGWIEEPLNIPCV*






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