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Report for Sequence Feature Glyma.08g243600

Feature Type:gene_model
Chromosome:Gm08
Start:20903205
stop:20909736
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g243600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G36110.1AT cytochrome P450, family 716, subfamily A, polypeptide 1 JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding JGI N/AIEA
GO:0009055GO-mf electron carrier activity JGI N/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen EnsemblGenomesN/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen JGI N/AIEA
GO:0020037GO-mf heme binding EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
KOG0157 KOG Cytochrome P450 CYP4/CYP19/CYP26 subfamilies JGI N/AIEA
PTHR24286Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24286:SF25Panther LANOSTEROL 14-ALPHA DEMETHYLASE JGI N/AIEA
PF00067PFAM Cytochrome P450 JGI N/AIEA
PWY-7067SoyCyc9 betulinate biosynthesis Plant Metabolic Network ISS
PWY-7068SoyCyc9 ursolate biosynthesis Plant Metabolic Network ISS
GN7V-47245SoyCyc9-rxn betulin dehydrogenase Plant Metabolic Network ISS

Expression Patterns of Glyma.08g243600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g243600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g26670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g243600
>Glyma.08g243600.1 sequence-type=CDS polypeptide=Glyma.08g243600.1.p locus=Glyma.08g243600 ID=Glyma.08g243600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGCAGTTGTACTACCTCACCCTTGTGCTACTGTTTGTGTCCTTCGTCTCTGTCTCTTTTTTCATCATTTTCTACAGGCATCGTTCTCCGTTCAGCGTCCCCAACTTGCCGCCGGGGAAGGCGGGGTTTCCGGTGATCGGCGAGAGCCTGGAGTTTCTGTCGGCGGGACGGAAGGGGCTTCCGGAGAAGTTCTTCTCCGATCGCATGACAGAGTACTCTTCCAAAGTGTTCAAGACCTCCATCTTAGGGGAGCCTACAGTGATTTTCTGTGGAGCCGCATGTAACAAGTTCTTGTTTTCTAACGAGAACAAACACGTCATTTCGTGGTGGCCTGAAAATGTCAAGAAGTTGTTCCCAACGAATATTCAAACAAACTCTAAGGAAGAAGCCAAGAAGTTGAGAAACATTCTCCCTCAGTTCCTCAGCGCCAAAGCCATCCAACGTTACGTTGGTATTATGGACACTGTTGCCCAAAGACACTTTGCTCTGGAGTGGGAGAACAACACCCAAGTCACCGTATTGCCCTTGGCCAAGAGGTATACCTTTGGGGTGGCTAGCCGTGTGTTCATGAGCATTGATGATTTGAATCAAGTGGCGAAATTGGCAGAACCTTTAAATCAGGTGAATGCAGGAATTATATCAATGCCCATTAACTTCCCCGGAACTGTGTTCAACCGAGGAATCAAGGCCTCCAAGTTCATTAGGAGGGAGCTGTTGAGGATTGTCAAGCAGAGGAAGGTGGAACTAGCTAATGGAATGTCCACACCAACACAAGACATTTTGTCTCACATGCTAATATATTGTGATGAGAATGGACAATATTTGGCTGAACATGATATTGTCAACAAGATCCTTGGCTTGCTGATAGGTAGCCATGAAACCACAAGTACTGTTTGCACTTTCGTTGTCAAATACCTTGCCGAGCTCCCTCAAAATATTTATGAAAATGTCTATCAAGAACAAATGGCGATTGCAAAATCCAAAGCTCCAGGAGAGTTGTTGAATTGGGATGACATCCAGAAGATGAAATATTCATGGAATGTAGCTTGTGAAGTAATAAGGCTTAACCCTCCAGCCCAAGGAGCTTTTAGGGAAGCCATCAATGACTTTATCTTCGATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCAAATTCAACTCACAAAAATCCAGAGTACTTCCCTGAGCCAGAGAAATTTGATCCAAGCAGATTTGAAGGAACTGGACCAGCTCCTTATACTTATGTGCCATTTGGTGGAGGGCCAAGTATGTGCCCTGGAAAAGAGTATGCGCGAATGGAACTATTGGTGTTCATGCACAACTTAGTGAAGAGGTTCAAGTGTGAAACTCTTTTTCCTAATGGAAATGTTACTTATAACCCTACGCCTATTCCTGCCAAGGGCCTTCCTGTTCGTCTTATTCCTCACCGATCATGA
Predicted protein sequences of Glyma.08g243600
>Glyma.08g243600.1.p sequence-type=predicted peptide transcript=Glyma.08g243600.1 locus=Glyma.08g243600 ID=Glyma.08g243600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEQLYYLTLVLLFVSFVSVSFFIIFYRHRSPFSVPNLPPGKAGFPVIGESLEFLSAGRKGLPEKFFSDRMTEYSSKVFKTSILGEPTVIFCGAACNKFLFSNENKHVISWWPENVKKLFPTNIQTNSKEEAKKLRNILPQFLSAKAIQRYVGIMDTVAQRHFALEWENNTQVTVLPLAKRYTFGVASRVFMSIDDLNQVAKLAEPLNQVNAGIISMPINFPGTVFNRGIKASKFIRRELLRIVKQRKVELANGMSTPTQDILSHMLIYCDENGQYLAEHDIVNKILGLLIGSHETTSTVCTFVVKYLAELPQNIYENVYQEQMAIAKSKAPGELLNWDDIQKMKYSWNVACEVIRLNPPAQGAFREAINDFIFDGFSIPKGWKLYWSANSTHKNPEYFPEPEKFDPSRFEGTGPAPYTYVPFGGGPSMCPGKEYARMELLVFMHNLVKRFKCETLFPNGNVTYNPTPIPAKGLPVRLIPHRS*






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