Glyma.08g238100

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Report for Sequence Feature Glyma.08g238100

Feature Type:	gene_model
Chromosome:	Gm08
Start:	20294013
stop:	20296401
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g238100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G14690.1	AT	cytochrome P450, family 72, subfamily A, polypeptide 15	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0004497	GO-mf	monooxygenase activity	EnsemblGenomes	N/A	IEA
GO:0005506	GO-mf	iron ion binding	EnsemblGenomes	N/A	IEA
GO:0005506	GO-mf	iron ion binding	JGI	N/A	IEA
GO:0009055	GO-mf	electron carrier activity	JGI	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0016705	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	EnsemblGenomes	N/A	IEA
GO:0016705	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	JGI	N/A	IEA
GO:0020037	GO-mf	heme binding	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	JGI	N/A	IEA
GO:0046872	GO-mf	metal ion binding	EnsemblGenomes	N/A	IEA
KOG0157	KOG	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies	JGI	N/A	IEA
PTHR24282	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24282:SF174	Panther		JGI	N/A	IEA
PF00067	PFAM	Cytochrome P450	JGI	N/A	IEA
PWY-7066	SoyCyc9	glycyrrhetinate biosynthesis	Plant Metabolic Network		ISS
GN7V-58670	SoyCyc9-rxn	11-oxo-β-amyrin 30-oxidase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.08g238100

Locus	Gene Symbol	Protein Name
	CYP72A67	cytochrome P450 72A15

Expression Patterns of Glyma.08g238100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g238100 not represented in the dataset	Glyma.08g238100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.08g238100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g25950	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g238100

Limit To All Plant Sequences

>Glyma.08g238100.2 sequence-type=transcript locus=Glyma.08g238100 ID=Glyma.08g238100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAATTGGAAGAGGGGGATGATGAGGGTGAACTAAAAAGCTAGCTAGCTAGTTTCATCTGGGTTATGCTTATGTCTGGCACAGAACAGGTGACCATGGGAGGATTAGGACTCAATTTGACTCCAATTACTACATTTGCTATCATTACTGTGATTGCTACGGTGCTAATATGGTGGTTTTGGAATGCACTCAACTGGGTGTGGCTGAGACCCAAGAGGATAGAGAGGCGTCTCAAGGAGCAGGGTATCCAAGGAAATTCCTACCGCCCTTTGATTGGAGACATCAGAGATATGGTTAAGATGATTAAGGAAGCCAAATCCAAACCTATGGATCCTCACTCTAATGACATTGCACCCCGTGTGTTGCCTTACGTTGTTCACACCATCGCTAAATACGGTAAGAGTTCATTTATGTGGCTTGGTCCAACACCAAGGGTATTCATCTTGGATCCTGACAAATTCAAAGAAATGGCTACTAAGGTCTATGATTTTCAAAAGCCCGACACTAGTCCACTTTTCAAGCTTCTAGCATCAGGGTTTGCAAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTGAGTCCAGCATTCAATGTAGAGAAAATGAAGCTCTTGGTACCGATATTTTGCCAGAGTTGCGATGATTTGATCAGCAAATGGGAGAGTTTGTTATCTTCGTCTAATGGGTCTTGTGAGTTAGATGTGTGGCCTTTTGTCCAAAACGTGTCAAGCGACGTTCTTGCTCGTGCAGGCTTTGGAAGTAGCTATCAAGAAGGGAAAAAAATATTCGAACTTCAAAGGGAAATGATTCAGCTTACAATGACGCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATACGAGAATCACTTATGGTAATCATCAACCGAAGATTAAAAGCAATCAAAGCAGGGGAGCCTACTAACAATGACTTGTTAGGCATACTCTTGGAATCAAATTACAAGGAATCTGAAAAAAGTAGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTGAAGCTATTTTACTTGGCAGGGCAGGAAGCAAATGCAGAATTGCTGGTCTGGACATTGTTGTTATTAAGCAGGCATCCAGATTGGCAAGAAAAGGCTAGGGAGGAGGTTTTCCAAGTGTTCGGGAATGAAAAGCCAGATTATGAAAGGATTGGTCAACTGAAAATTGtaagtaacataattaattaattaatggcttgattcattTCAGTTCACCCTAATCATCGTCCTACACTACAGGTGTCGATGATTCTACAGGAGAGTCTCAGATTATACCCACCAGTGGTTATGTTCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGAGCTTACAATTCCCGCAGGAGTGGAGCTTGTTGTACCTGTGTCAATGCTACACCAGGATAAGGAGTTTTGGGGAGATGATGCCGGGGAATTCAACCCAGAAAGATTCTCGGAAGGAGTATCAAAGGCAACAAAAGGCAAGCTTTCCTACTTGCCATTTGGATGGGGTCCTCGACTCTGCATAGGACAAAACTTTGGCTTGTTAGAAGCAAAAGTAGCTGTGTCAATGATCCTGCAACGTTTCTCCCTCCATTTTTCCCCCTCCTATGCTCATGCCCCCTCCTTTATTATCACTCTTCAGCCTGAGCGTGGGGCTCATCTCATTTTACGCAAACTCTAGAATGCACTTTTTAGTCTAAATAAGGCTTCTTCATTTGAGGCGTGTTTGCAATTTTAGTTTTCCTATTCCTGCTAGTTTCTTATGTAGACGATAGATCTGAACCTTCACTTCAAATCTATTTCCAAGATCAATATATACCTGTTTTGCCTAAGTTACTGGTGTAATTACTCCTCCTTATATAAACTTTATCATGTTTGAATTTTAAATTGATAGAGTTTACCTTTTGGCTTTTGCATCC

Coding sequences of Glyma.08g238100

Limit To All Plant Sequences

>Glyma.08g238100.1 sequence-type=CDS polypeptide=Glyma.08g238100.1.p locus=Glyma.08g238100 ID=Glyma.08g238100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTATGTCTGGCACAGAACAGGTGACCATGGGAGGATTAGGACTCAATTTGACTCCAATTACTACATTTGCTATCATTACTGTGATTGCTACGGTGCTAATATGGTGGTTTTGGAATGCACTCAACTGGGTGTGGCTGAGACCCAAGAGGATAGAGAGGCGTCTCAAGGAGCAGGGTATCCAAGGAAATTCCTACCGCCCTTTGATTGGAGACATCAGAGATATGGTTAAGATGATTAAGGAAGCCAAATCCAAACCTATGGATCCTCACTCTAATGACATTGCACCCCGTGTGTTGCCTTACGTTGTTCACACCATCGCTAAATACGGTAAGAGTTCATTTATGTGGCTTGGTCCAACACCAAGGGTATTCATCTTGGATCCTGACAAATTCAAAGAAATGGCTACTAAGGTCTATGATTTTCAAAAGCCCGACACTAGTCCACTTTTCAAGCTTCTAGCATCAGGGTTTGCAAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTGAGTCCAGCATTCAATGTAGAGAAAATGAAGCTCTTGGTACCGATATTTTGCCAGAGTTGCGATGATTTGATCAGCAAATGGGAGAGTTTGTTATCTTCGTCTAATGGGTCTTGTGAGTTAGATGTGTGGCCTTTTGTCCAAAACGTGTCAAGCGACGTTCTTGCTCGTGCAGGCTTTGGAAGTAGCTATCAAGAAGGGAAAAAAATATTCGAACTTCAAAGGGAAATGATTCAGCTTACAATGACGCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATACGAGAATCACTTATGGTAATCATCAACCGAAGATTAAAAGCAATCAAAGCAGGGGAGCCTACTAACAATGACTTGTTAGGCATACTCTTGGAATCAAATTACAAGGAATCTGAAAAAAGTAGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTGAAGCTATTTTACTTGGCAGGGCAGGAAGCAAATGCAGAATTGCTGGTCTGGACATTGTTGTTATTAAGCAGGCATCCAGATTGGCAAGAAAAGGCTAGGGAGGAGGTTTTCCAAGTGTTCGGGAATGAAAAGCCAGATTATGAAAGGATTGGTCAACTGAAAATTGTGTCGATGATTCTACAGGAGAGTCTCAGATTATACCCACCAGTGGTTATGTTCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGAGCTTACAATTCCCGCAGGAGTGGAGCTTGTTGTACCTGTGTCAATGCTACACCAGGATAAGGAGTTTTGGGGAGATGATGCCGGGGAATTCAACCCAGAAAGATTCTCGGAAGGAGTATCAAAGGCAACAAAAGGCAAGCTTTCCTACTTGCCATTTGGATGGGGTCCTCGACTCTGCATAGGACAAAACTTTGGCTTGTTAGAAGCAAAAGTAGCTGTGTCAATGATCCTGCAACGTTTCTCCCTCCATTTTTCCCCCTCCTATGCTCATGCCCCCTCCTTTATTATCACTCTTCAGCCTGAGCGTGGGGCTCATCTCATTTTACGCAAACTCTAG

>Glyma.08g238100.2 sequence-type=CDS polypeptide=Glyma.08g238100.2.p locus=Glyma.08g238100 ID=Glyma.08g238100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTATGTCTGGCACAGAACAGGTGACCATGGGAGGATTAGGACTCAATTTGACTCCAATTACTACATTTGCTATCATTACTGTGATTGCTACGGTGCTAATATGGTGGTTTTGGAATGCACTCAACTGGGTGTGGCTGAGACCCAAGAGGATAGAGAGGCGTCTCAAGGAGCAGGGTATCCAAGGAAATTCCTACCGCCCTTTGATTGGAGACATCAGAGATATGGTTAAGATGATTAAGGAAGCCAAATCCAAACCTATGGATCCTCACTCTAATGACATTGCACCCCGTGTGTTGCCTTACGTTGTTCACACCATCGCTAAATACGGTAAGAGTTCATTTATGTGGCTTGGTCCAACACCAAGGGTATTCATCTTGGATCCTGACAAATTCAAAGAAATGGCTACTAAGGTCTATGATTTTCAAAAGCCCGACACTAGTCCACTTTTCAAGCTTCTAGCATCAGGGTTTGCAAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTGAGTCCAGCATTCAATGTAGAGAAAATGAAGCTCTTGGTACCGATATTTTGCCAGAGTTGCGATGATTTGATCAGCAAATGGGAGAGTTTGTTATCTTCGTCTAATGGGTCTTGTGAGTTAGATGTGTGGCCTTTTGTCCAAAACGTGTCAAGCGACGTTCTTGCTCGTGCAGGCTTTGGAAGTAGCTATCAAGAAGGGAAAAAAATATTCGAACTTCAAAGGGAAATGATTCAGCTTACAATGACGCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATACGAGAATCACTTATGGTAATCATCAACCGAAGATTAAAAGCAATCAAAGCAGGGGAGCCTACTAACAATGACTTGTTAGGCATACTCTTGGAATCAAATTACAAGGAATCTGAAAAAAGTAGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTGAAGCTATTTTACTTGGCAGGGCAGGAAGCAAATGCAGAATTGCTGGTCTGGACATTGTTGTTATTAAGCAGGCATCCAGATTGGCAAGAAAAGGCTAGGGAGGAGGTTTTCCAAGTGTTCGGGAATGAAAAGCCAGATTATGAAAGGATTGGTCAACTGAAAATTGTAAGTAACATAATTAATTAA

Predicted protein sequences of Glyma.08g238100

Limit To All Plant Sequences

>Glyma.08g238100.1.p sequence-type=predicted peptide transcript=Glyma.08g238100.1 locus=Glyma.08g238100 ID=Glyma.08g238100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLMSGTEQVTMGGLGLNLTPITTFAIITVIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSKPMDPHSNDIAPRVLPYVVHTIAKYGKSSFMWLGPTPRVFILDPDKFKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKLLVPIFCQSCDDLISKWESLLSSSNGSCELDVWPFVQNVSSDVLARAGFGSSYQEGKKIFELQREMIQLTMTLFKFAFIPGYRFLPTHTNRRMKAIDKEIRESLMVIINRRLKAIKAGEPTNNDLLGILLESNYKESEKSSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSRHPDWQEKAREEVFQVFGNEKPDYERIGQLKIVSMILQESLRLYPPVVMFARYLRKDTKLGELTIPAGVELVVPVSMLHQDKEFWGDDAGEFNPERFSEGVSKATKGKLSYLPFGWGPRLCIGQNFGLLEAKVAVSMILQRFSLHFSPSYAHAPSFIITLQPERGAHLILRKL*

>Glyma.08g238100.2.p sequence-type=predicted peptide transcript=Glyma.08g238100.2 locus=Glyma.08g238100 ID=Glyma.08g238100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLMSGTEQVTMGGLGLNLTPITTFAIITVIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSKPMDPHSNDIAPRVLPYVVHTIAKYGKSSFMWLGPTPRVFILDPDKFKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKLLVPIFCQSCDDLISKWESLLSSSNGSCELDVWPFVQNVSSDVLARAGFGSSYQEGKKIFELQREMIQLTMTLFKFAFIPGYRFLPTHTNRRMKAIDKEIRESLMVIINRRLKAIKAGEPTNNDLLGILLESNYKESEKSSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSRHPDWQEKAREEVFQVFGNEKPDYERIGQLKIVSNIIN*

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