SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g225100

Feature Type:gene_model
Chromosome:Gm08
Start:18320809
stop:18322810
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g225100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G24400.1AT JGI N/AIEA
GO:0009733GO-bp response to auxin JGI N/AIEA
K14488KEGG Plant hormone signal transduction JGI N/AIEA
PTHR31374PantherFam AUXIN-INDUCED PROTEIN-LIKE-RELATED JGI N/AIEA
PTHR31374:SF6PantherFam OS02G0143400 PROTEIN JGI N/AIEA
PF02519Pfam Auxin responsive protein JGI N/AIEA

Gene model name correspondences to Glyma.08g225100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g24080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g225100
>Glyma.08g225100.1 sequence-type=CDS polypeptide=Glyma.08g225100.1.p locus=Glyma.08g225100 id=Glyma.08g225100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTCAAAGAAGTGTAACAAGATCAGAGAAGTTGTTAGGCTTCAACAAATCCTCAAGAAATGGAAGAAAGTTGCAACTGCTTCCAACAACAACAACAACAGCTCCAGCAGTAAAGGCATCAAGTTTTTGAAGCGAACCCTTTCATTCACAGATGTTTCTTCCACCAACACCAATCAAGACATCGTTCCAAAAGGGTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACGGATTACTTGAGACACCAAGCTTTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTCCTCAAAATCCCATGCCAAGTATCAGTCTTCGAGAAAATATTGAATGCCGTGGAAGACAACAAACAACCCTTGGATGAGTTTGGCTTCAATGCGTCTGATTGTGAAGTCACTTCCCCTCATCATGCTCAACCGTGTACATAG

>Glyma.08g225100.2 sequence-type=CDS polypeptide=Glyma.08g225100.2.p locus=Glyma.08g225100 id=Glyma.08g225100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTCAAAGAAGTGTAACAAGATCAGAGAAGTTGTTAGGCTTCAACAAATCCTCAAGAAATGGAAGAAAGTTGCAACTGCTTCCAACAACAACAACAACAGCTCCAGCAGTAAAGGCATCAAGTTTTTGAAGCGAACCCTTTCATTCACAGATGTTTCTTCCACCAACACCAATCAAGACATCGTTCCAAAAGGGTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACGGATTACTTGAGACACCAAGCTTTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTCCTCAAAATCCCATGCCAAGTATCAGTCTTCGAGAAAATATTGAATGCCGTGGAAGACAACAAACAACCCTTGGATGAGTTTGGCTTCAATGCGTCTGATTGTGAAGTCACTTCCCCTCATCATGCTCAACCGTGGGATTTGAATAGCGCCATCGTGATCGCAGCCATATTCCTCTGCCACCGACTCCATCAAAACCTTGAAGTCTGGCATGGCCAAGAAGCTTACTGGAATGACAAACCTTCGAAGGTCGGGACCCACGTAAACAGCCAGGGACCCTTTGGGAACCACCTGTTGCTTGCTACTTCCATCCGACGACGACGACGGTTGTCCTGA
Predicted protein sequences of Glyma.08g225100
>Glyma.08g225100.1.p sequence-type=predicted peptide transcript=Glyma.08g225100.1 locus=Glyma.08g225100 id=Glyma.08g225100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSKKCNKIREVVRLQQILKKWKKVATASNNNNNSSSSKGIKFLKRTLSFTDVSSTNTNQDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILNAVEDNKQPLDEFGFNASDCEVTSPHHAQPCT*

>Glyma.08g225100.2.p sequence-type=predicted peptide transcript=Glyma.08g225100.2 locus=Glyma.08g225100 id=Glyma.08g225100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSKKCNKIREVVRLQQILKKWKKVATASNNNNNSSSSKGIKFLKRTLSFTDVSSTNTNQDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILNAVEDNKQPLDEFGFNASDCEVTSPHHAQPWDLNSAIVIAAIFLCHRLHQNLEVWHGQEAYWNDKPSKVGTHVNSQGPFGNHLLLATSIRRRRRLS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo