SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g212900

Feature Type:gene_model
Chromosome:Gm08
Start:17252383
stop:17254333
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g212900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G15850.1AT ADS3,FAD5,FADB,JB67 JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
KOG1600 KOG Fatty acid desaturase JGI N/AIEA
PTHR11351PantherFam ACYL-COA DESATURASE JGI N/AIEA
PF00487Pfam Fatty acid desaturase JGI N/AIEA

Proteins Associated with Glyma.08g212900
LocusGene SymbolProtein Name
FAD5.2 delta-7 desaturase

Gene model name correspondences to Glyma.08g212900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g22730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g212900
>Glyma.08g212900.1 sequence-type=CDS polypeptide=Glyma.08g212900.1.p locus=Glyma.08g212900 id=Glyma.08g212900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCTCCTCACATCCCAACCTAAAAACCCCATTCTCCATCGCTTCACCACCCTTCACTGCCCTCTTCCACGCTTACATAGAACCGTTCTTGGTCTTGGCTCCTTCTCTCACAACAGTGCTCTCTCCACTAAAAAACTTAACTTTAACCCAACGCAAACCAAAATTTCCCTTCAAAACAACCCCTTTACCTATAATTTGGCAGTGACAGCCAAAGCCAATGCCAATGCTGCATTTGGAGAAGGTTTCAAGGAGGAAGGGGCATCGAGACACAGAAAGATTTTGTTGTCAGAGGTTGAGGTGAAGAGAGAGAGGAGAGTTTTCTTTGGCAGAAAATGGAACTCTTTGGATTTTGGCACTGCTGGAATTGTGTTGGCAATGCATCTCCTTTGCGTCTTTGCTCCATTCCATTTCAATTGGCCAGCTTTTTGGGTGGCTGTGGCTCTCTATATTGTCACTGGCCTTTTTGGTATCACTCTTTCTTTCCATAGGAACCTTTCTCACAGGAGTTTCAAGCTTCCCAAATGGCTTGAATACTTCTTTGCCTATTGTGGGGTCCTGGCTCTTCAGGGGAATCCGATTGATTGGGTGAGCACACATAGGTACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCAACTGAAGGATTCTGGTTCAGTCATATGAGTTGGCTATTTGATACCAATTCTGTCCTAGAAAGGTGTGGAGAGGCAAACAATGTTGGTGATTTGGAGAAACAATCCTTCTATAGATTTCTCCGAAGCACTTACCTTGCCCACCCTTTTGCTTTGGGAGCCCTTTTATATGCCGCAGGAGGATTTCCTTTCCTTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTCTGGGGGAATCAAGCATGGAACACCAGGGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTACTCAGCTAGACATGGACTTGAGTGGTGGCAAATAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGACGTCAAGTTACCCACAGAGAGTCAGAAGCAGAAAATGGCATTCAATAGTGATTCAATTGCCACATGA
Predicted protein sequences of Glyma.08g212900
>Glyma.08g212900.1.p sequence-type=predicted peptide transcript=Glyma.08g212900.1 locus=Glyma.08g212900 id=Glyma.08g212900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALLTSQPKNPILHRFTTLHCPLPRLHRTVLGLGSFSHNSALSTKKLNFNPTQTKISLQNNPFTYNLAVTAKANANAAFGEGFKEEGASRHRKILLSEVEVKRERRVFFGRKWNSLDFGTAGIVLAMHLLCVFAPFHFNWPAFWVAVALYIVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSVLERCGEANNVGDLEKQSFYRFLRSTYLAHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQIDMTWYVVRFLQAIGLATDVKLPTESQKQKMAFNSDSIAT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo