Glyma.08g204300

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Report for Sequence Feature Glyma.08g204300

Feature Type:	gene_model
Chromosome:	Gm08
Start:	16557804
stop:	16566403
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g204300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G16170.1	AT	AMP-dependent synthetase and ligase family protein	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	EnsemblGenomes	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
KOG1176	KOG	Acyl-CoA synthetase	JGI	N/A	IEA
PTHR24095	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24095:SF48	Panther		JGI	N/A	IEA
PF00501	PFAM	AMP-binding enzyme	JGI	N/A	IEA
PWY-1121	SoyCyc9	suberin monomers biosynthesis	Plant Metabolic Network		ISS
PWY-321	SoyCyc9	cutin biosynthesis	Plant Metabolic Network		ISS
PWY-5143	SoyCyc9	long-chain fatty acid activation	Plant Metabolic Network		ISS
PWY-5147	SoyCyc9	oleate biosynthesis I (plants)	Plant Metabolic Network		ISS
PWY-5156	SoyCyc9	superpathway of fatty acid biosynthesis II (plant)	Plant Metabolic Network		ISS
PWY-5971	SoyCyc9	palmitate biosynthesis II (bacteria and plants)	Plant Metabolic Network		ISS
PWY-5989	SoyCyc9	stearate biosynthesis II (bacteria and plants)	Plant Metabolic Network		ISS
PWY-6733	SoyCyc9	sporopollenin precursors biosynthesis	Plant Metabolic Network		ISS
PWY-6803	SoyCyc9	phosphatidylcholine acyl editing	Plant Metabolic Network		ISS
GN7V-50720	SoyCyc9-rxn	long-chain-fatty-acid-CoA ligase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.08g204300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g204300 not represented in the dataset	Glyma.08g204300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.08g204300

Paralog	Evidence	Comments
Glyma.07g019100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g204300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g21840	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g204300

Limit To All Plant Sequences

>Glyma.08g204300.2 sequence-type=transcript locus=Glyma.08g204300 ID=Glyma.08g204300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TACTAAGATAATTCCTACCACACAAGAAGAAACCTATCTTCAAAAAGGCAAAAACATAAATACAAAATGTGGTAGTAACAAGTTACAAGCTGTGACTCACAAACATCCTATTACAATTAAGTTGTCCTGAACCCTAAGAAACAATAATCAAGAGGCCCCTCGAAACAGAAGGAACCCAGAAAAAAAAAACAGTATTGCACcattggcattggtattgcaattggaattgaataggcattagcattATAATAGCCCCCCGAAACTGAAAGCCATATTTGACTGAAAGAAAGAAAGACAGACAAAATTAGAGGTGCAAAAAGAGGAACGTGCGAAAAATAGAATTAGAGTTTTGCAGTTTCCACCTAACTCCACTGCTCAATTAGTTGGTTACATTACCATATCTGCCACCCACCTAAATGAGTTGCTCATTGAAAGCTTTCGACAAACACCTTACTCTCCTTCCTCAACGTACTTTTTCTTCTTCTTCCCATGCCTTCATAGCTTCCTCTTCCTTCCCTCTTTTCCCGCACCTTGCTTCCTACCCCACCTCTTTCTCTCAGTTTCGTCCACTCTCTTCATCTGCACCTGCTACATTAATGGAGGTGGTCAAAGCAATTGCTAAGCACGAACCTACAGTTCCTGAGAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTGTCTCATCGGCACAGAAGATATCCAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAGTAGGAATTGTAGCCAAACCCTCCGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGACTAATAATTCGGATGTATCTGCAATACTGAGTACTGAAGATCATAGTGAAATAATGCAAAGCATAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACTTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATGACCATTCGCAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAATTTTGGAAGATTAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACAAAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCATGGGAGTACACATCTGCTGATCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGAAGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTAAAAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGGTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGTGAGCTTTGCTTTAAAAGCCCTTCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGCAACAAAGGAATCATTTACTGATGATGGATTCTTCAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACCATCCGGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCGTTGTGCCACAGGCTGATGTTAAACTGAAACGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAACTAATCGTGTGGGATAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGCTTACCATTTGAGCATTTATTCACTAGGCAAAGTTAATTTATTGAAAAATCAGTTTTAGATGGTGGCAATCTCAAATAAAATTGCACCAATTATTTAGTGAAATAGAAACCTTTATATTCTGACATTTATTAAGCTCAATAAGTTTGAGCATATTATTAGGGGGAAGATAAAGGAGAAAATATAGCATAAGTTTGGCATTTTAGCTGTATGATGGTGATTTGATTGAATGtatttaatgagaaatatttattatattgaaaatgaaaaaatatttaatatttacttcctttagtaattaaaaatatttaataC

Coding sequences of Glyma.08g204300

Limit To All Plant Sequences

>Glyma.08g204300.1 sequence-type=CDS polypeptide=Glyma.08g204300.1.p locus=Glyma.08g204300 ID=Glyma.08g204300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTTGCTCATTGAAAGCTTTCGACAAACACCTTACTCTCCTTCCTCAACGTACTTTTTCTTCTTCTTCCCATGCCTTCATAGCTTCCTCTTCCTTCCCTCTTTTCCCGCACCTTGCTTCCTACCCCACCTCTTTCTCTCAGTTTCGTCCACTCTCTTCATCTGCACCTGCTACATTAATGGAGGTGGTCAAAGCAATTGCTAAGCACGAACCTACAGTTCCTGAGAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTGTCTCATCGGCACAGAAGATATCCAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAGTAGGAATTGTAGCCAAACCCTCCGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGACTAATAATTCGGATGTATCTGCAATACTGAGTACTGAAGATCATAGTGAAATAATGCAAAGCATAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACTTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATGACCATTCGCAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAATTTTGGAAGATTAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACAAAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCATGGGAGTACACATCTGCTGATCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGAAGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTAAAAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGGTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGTGAGCTTTGCTTTAAAAGCCCTTCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGCAACAAAGGAATCATTTACTGATGATGGATTCTTCAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACGTAATAATGCTGATATAATCAAGGCTGGTGGATATAAGCTTTCTGCATTAGAAATTGAATCAGTTATAATAGAGCATCCGGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCGTTGTGCCACAGGCTGATGTTAAACTGAAACGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAACTAATCGTGTGGGATAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGCTTACCATTTGA

>Glyma.08g204300.2 sequence-type=CDS polypeptide=Glyma.08g204300.2.p locus=Glyma.08g204300 ID=Glyma.08g204300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTTGCTCATTGAAAGCTTTCGACAAACACCTTACTCTCCTTCCTCAACGTACTTTTTCTTCTTCTTCCCATGCCTTCATAGCTTCCTCTTCCTTCCCTCTTTTCCCGCACCTTGCTTCCTACCCCACCTCTTTCTCTCAGTTTCGTCCACTCTCTTCATCTGCACCTGCTACATTAATGGAGGTGGTCAAAGCAATTGCTAAGCACGAACCTACAGTTCCTGAGAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTGTCTCATCGGCACAGAAGATATCCAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAGTAGGAATTGTAGCCAAACCCTCCGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGACTAATAATTCGGATGTATCTGCAATACTGAGTACTGAAGATCATAGTGAAATAATGCAAAGCATAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACTTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATGACCATTCGCAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAATTTTGGAAGATTAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACAAAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCATGGGAGTACACATCTGCTGATCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGAAGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTAAAAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGGTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGTGAGCTTTGCTTTAAAAGCCCTTCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGCAACAAAGGAATCATTTACTGATGATGGATTCTTCAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACCATCCGGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCGTTGTGCCACAGGCTGA

Predicted protein sequences of Glyma.08g204300

Limit To All Plant Sequences

>Glyma.08g204300.1.p sequence-type=predicted peptide transcript=Glyma.08g204300.1 locus=Glyma.08g204300 ID=Glyma.08g204300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSCSLKAFDKHLTLLPQRTFSSSSHAFIASSSFPLFPHLASYPTSFSQFRPLSSSAPATLMEVVKAIAKHEPTVPESVAIRADQKSYSYKQLVSSAQKISNLLCGSDAQTGNLGGARVGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVTNNSDVSAILSTEDHSEIMQSIANKSSSQFFHLPLVLNKSSEKSRDDHSQNGGIHTDKILLDNFGRLSEDPALILYTSGTTGKPKGVVHTHKSIISQVQTLTKAWEYTSADQFLHCLPLHHVHGFFNGLMAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKAEDAITVFTGVPTIYARLIQGYHAMDPELQAASVSAAKNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIITDEESVNENTGMGELCFKSPSLFKEYWKLPEATKESFTDDGFFKTGDAVTTDEDGYFIILGRNNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPDKDYGEIVGAIVVPQADVKLKRDQESKPVLSLEELSTWAKDKIAPYKIPTQLIVWDKLPRNAMGKVNKKELKKLLTI*

>Glyma.08g204300.2.p sequence-type=predicted peptide transcript=Glyma.08g204300.2 locus=Glyma.08g204300 ID=Glyma.08g204300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSCSLKAFDKHLTLLPQRTFSSSSHAFIASSSFPLFPHLASYPTSFSQFRPLSSSAPATLMEVVKAIAKHEPTVPESVAIRADQKSYSYKQLVSSAQKISNLLCGSDAQTGNLGGARVGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVTNNSDVSAILSTEDHSEIMQSIANKSSSQFFHLPLVLNKSSEKSRDDHSQNGGIHTDKILLDNFGRLSEDPALILYTSGTTGKPKGVVHTHKSIISQVQTLTKAWEYTSADQFLHCLPLHHVHGFFNGLMAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKAEDAITVFTGVPTIYARLIQGYHAMDPELQAASVSAAKNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIITDEESVNENTGMGELCFKSPSLFKEYWKLPEATKESFTDDGFFKTGDAVTTDEDGYFIILGPSGCLRMLRFRPTRQRLWRDCWCNRCATG*

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