SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g203200

Feature Type:gene_model
Chromosome:Gm08
Start:16558826
stop:16561082
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g203200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G05385.1AT LPA19,Psb27-H1 JGI N/AIEA
GO:0010207GO-bp photosystem II assembly JGI N/AIEA
PTHR34041PantherFam PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTIC JGI N/AIEA
PTHR34041:SF3PantherFam PHOTOSYSTEM II D1 PRECURSOR PROCESSING PROTEIN PSB27-H2, CHLOROPLASTIC JGI N/AIEA
PF13326Pfam Photosystem II Pbs27 JGI N/AIEA

Gene model name correspondences to Glyma.08g203200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g21750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g203200
>Glyma.08g203200.1 sequence-type=CDS polypeptide=Glyma.08g203200.1.p locus=Glyma.08g203200 id=Glyma.08g203200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCACTTATCCTTGCAGCAAATATGTGCTCCATTACAAATTCCAAAACGGTTGAAGTGATAAAAAGAATCGATATTGAAGATAAAATGCAATCCAGATCTAATATTGCACTGCCTCCTTCGGAAGCTTCATCAAGTCGCAGGCATCTCTTAATCGGTGTTGGTCCTTCATTGCTTACCTTGACGTGTGGTTTATCACCACCAACGGTATGGGCCGAAGAGAAGTCTGGCGACAAAGAGGAAGAAGATAAAGGGGTTATTGGGGCCATCAAATCACTATTTGATCCTAATGAGAAAACAAAGTCTGGAAAGGTGTTGCCAAAGGCTTACTTAAGGTCAGCAAGGGAAGTAGTGAAAACACTGCGTGAATCTTTAAACGAAGGCACCGATGATAATGCCAAATTTAGACGGACTGCGGACTCAGCAAAGGAGTCAATTCGGGAGTATTTGGGCAGTTGGAGGGGAAATCAGATTGTTGCTCAAGAAGAATCATATGTTATTTTGGAAAAAGTAATCAGATCTTTGGCAAACTATTACTCAAAAGCAGGGCCATCAGCTCCACTGTCACATGAAGTAAAGTCTGAAATATTAGATTATCTAAATACAGCTGAAGAATTTTTGTAG
Predicted protein sequences of Glyma.08g203200
>Glyma.08g203200.1.p sequence-type=predicted peptide transcript=Glyma.08g203200.1 locus=Glyma.08g203200 id=Glyma.08g203200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALILAANMCSITNSKTVEVIKRIDIEDKMQSRSNIALPPSEASSSRRHLLIGVGPSLLTLTCGLSPPTVWAEEKSGDKEEEDKGVIGAIKSLFDPNEKTKSGKVLPKAYLRSAREVVKTLRESLNEGTDDNAKFRRTADSAKESIREYLGSWRGNQIVAQEESYVILEKVIRSLANYYSKAGPSAPLSHEVKSEILDYLNTAEEFL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo