Glyma.08g199700

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Report for Sequence Feature Glyma.08g199700

Feature Type:	gene_model
Chromosome:	Gm08
Start:	16130591
stop:	16137703
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g199700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G50340.1	AT	ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases	JGI	N/A	IEA
GO:0006260	GO-bp	DNA replication	JGI	N/A	IEA
GO:0006281	GO-bp	DNA repair	EnsemblGenomes	N/A	IEA
GO:0006508	GO-bp	proteolysis	JGI	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003678	GO-mf	DNA helicase activity	JGI	N/A	IEA
GO:0003684	GO-mf	damaged DNA binding	EnsemblGenomes	N/A	IEA
GO:0004176	GO-mf	ATP-dependent peptidase activity	JGI	N/A	IEA
GO:0004252	GO-mf	serine-type endopeptidase activity	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0008094	GO-mf	DNA-dependent ATPase activity	EnsemblGenomes	N/A	IEA
PTHR10046	Panther	ATP DEPENDENT LON PROTEASE FAMILY MEMBER	JGI	N/A	IEA
PTHR10046:SF25	Panther		JGI	N/A	IEA
PF05362	PFAM	Lon protease (S16) C-terminal proteolytic domain	JGI	N/A	IEA
PF06745	PFAM	KaiC	JGI	N/A	IEA

Expression Patterns of Glyma.08g199700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g199700 not represented in the dataset	Glyma.08g199700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.08g199700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g21360	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g199700

Limit To All Plant Sequences

>Glyma.08g199700.2 sequence-type=transcript locus=Glyma.08g199700 ID=Glyma.08g199700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAAAAATTGGTGATTTTTAAGAAATTTCAATCAATCACAGGGAGAGTGTAGGAAAGAGAGTATGAGTGAGAGTGTAGGAAAGAGAGTATGAGTGAGAGTGTGGCTAACATTTGTCTTCATGTTATGAGGGTATCCTATATTCCTATTTTTTATGATACTGGACACCTAGTATCTATATACACCTATAGAGAGAAATGTAAATGTCACAGGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGTTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAACCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAGTAATTGCTCAGATAACATATTTGCGTCACGTAAAGTATGACTAGTTATTTTGTATATGTAAAAAATATATAAAATATGTAATATATTTAAATTAACTTTTGTTAGAGGCTGAGTTCAGTTTCCTTTCTTGTTTCTTTTTCCCATGTAAATATATTGAAGAGTAGTCCTCTTCAGTCTTCACAGAACTATTTGCTCTATGTGCTTATTAATAATAAATAAAAAATGTAGTGTGCTTTC

>Glyma.08g199700.3 sequence-type=transcript locus=Glyma.08g199700 ID=Glyma.08g199700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTAATTATGAAAAAAAATATCCTCTTCATAAGTATTTTAAAGCATTACCATCTGGTAATGATCTGAAGAACTCAGTAGTCAGTACATACATTATAGTGTGTGAGAGAATCTTCACATGAACCTTCACTTTAGATCTCATGGTAAATGTGGTGTCTTTTTCAAGTGTTATACTGTGTAGCTTGCTTTGATCTCAGGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGTTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAACCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAGTAATTGCTCAGATAACATATTTGCGTCACGTAAAGTATGACTAGTTATTTTGTATATGTAAAAAATATATAAAATATGTAATATATTTAAATTAACTTTTGTTAGAGGCTGAGTTCAGTTTCCTTTCTTGTTTCTTTTTCCCATGTAAATATATTGAAGAGTAGTCCTCTTCAGTCTTCACAGAACTATTTGCTCTATGTGCTTATTAATAATAAATAAAAAATGTAGTGTGCTTTC

Coding sequences of Glyma.08g199700

Limit To All Plant Sequences

>Glyma.08g199700.1 sequence-type=CDS polypeptide=Glyma.08g199700.1.p locus=Glyma.08g199700 ID=Glyma.08g199700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTTCCTTCTCTGTTTCTGGTTTCCCTCCATTCCCACTTCGCAGGGCATATCCAAGAAGAGTAAGTGCAAGCTTTGACATTGACACCCCACAAGACCCCAATTCAGTCAACCCTAATGGCTCGAATGCTAAATTTGAAGAAGAAGAAGAAGAATTTCGAAAGGGAAAGGAGAGAGGGAGAGTGATAGGTGGTGGTGGGGTTTTCATTGGAAGGAAGAAGAAGGCGGGGAAGGAGAAAGTTCAATGGGTTTGCTGCAATTGTGGGTACAGTGCAGGGCAATGGTGGGGCATGTGTCGATCATGCAGTGTATCTGGCACTATGAAAGAAGCCAAATTTAGTGATGCTGATACTGTGGTTAGTGGGTTTTCAGTTTTGGAGGATGGTGTTGTGGGGTCTTGGCTACCGCAACAGGAAGGTGAAATGCGCCCCTTGAGATTGACAGAGGTAAACAAGGGACTTGATCATCACCATTGGAGAATTCCTCTGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGTTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAACCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAG

>Glyma.08g199700.2 sequence-type=CDS polypeptide=Glyma.08g199700.2.p locus=Glyma.08g199700 ID=Glyma.08g199700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGAGAGTGTGGCTAACATTTGTCTTCATGTTATGAGGGTATCCTATATTCCTATTTTTTATGATACTGGACACCTAGTATCTATATACACCTATAGAGAGAAATGTAAATGTCACAGGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGTTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAACCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAG

>Glyma.08g199700.3 sequence-type=CDS polypeptide=Glyma.08g199700.3.p locus=Glyma.08g199700 ID=Glyma.08g199700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGGTGTCTTTTTCAAGTGTTATACTGTGTAGCTTGCTTTGATCTCAGGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGTTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAACCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAG

Predicted protein sequences of Glyma.08g199700

Limit To All Plant Sequences

>Glyma.08g199700.1.p sequence-type=predicted peptide transcript=Glyma.08g199700.1 locus=Glyma.08g199700 ID=Glyma.08g199700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLSFSVSGFPPFPLRRAYPRRVSASFDIDTPQDPNSVNPNGSNAKFEEEEEEFRKGKERGRVIGGGGVFIGRKKKAGKEKVQWVCCNCGYSAGQWWGMCRSCSVSGTMKEAKFSDADTVVSGFSVLEDGVVGSWLPQQEGEMRPLRLTEVNKGLDHHHWRIPLSGPFGDEVSRVFGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAKGDSDGEACPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR*

>Glyma.08g199700.2.p sequence-type=predicted peptide transcript=Glyma.08g199700.2 locus=Glyma.08g199700 ID=Glyma.08g199700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSESVANICLHVMRVSYIPIFYDTGHLVSIYTYREKCKCHRSGPFGDEVSRVFGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAKGDSDGEACPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR*

>Glyma.08g199700.3.p sequence-type=predicted peptide transcript=Glyma.08g199700.3 locus=Glyma.08g199700 ID=Glyma.08g199700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MWCLFQVLYCVACFDLRSGPFGDEVSRVFGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAKGDSDGEACPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR*

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