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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G71220.2 | AT | UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups | JGI | N/A | IEA |
| GO:0006486 | GO-bp | protein glycosylation | EnsemblGenomes | N/A | IEA |
| GO:0006486 | GO-bp | protein glycosylation | JGI | N/A | IEA |
| GO:0018279 | GO-bp | protein N-linked glycosylation via asparagine | EnsemblGenomes | N/A | IEA |
| GO:0030968 | GO-bp | endoplasmic reticulum unfolded protein response | EnsemblGenomes | N/A | IEA |
| GO:0051084 | GO-bp | 'de novo' posttranslational protein folding | EnsemblGenomes | N/A | IEA |
| GO:0071712 | GO-bp | ER-associated misfolded protein catabolic process | EnsemblGenomes | N/A | IEA |
| GO:0097359 | GO-bp | UDP-glucosylation | EnsemblGenomes | N/A | IEA |
| GO:0005783 | GO-cc | endoplasmic reticulum | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
| GO:0003980 | GO-mf | UDP-glucose:glycoprotein glucosyltransferase activity | EnsemblGenomes | N/A | IEA |
| GO:0003980 | GO-mf | UDP-glucose:glycoprotein glucosyltransferase activity | JGI | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016757 | GO-mf | transferase activity, transferring glycosyl groups | EnsemblGenomes | N/A | IEA |
| GO:0016757 | GO-mf | transferase activity, transferring glycosyl groups | JGI | N/A | IEA |
| GO:0051082 | GO-mf | unfolded protein binding | EnsemblGenomes | N/A | IEA |
| KOG1879 | KOG | UDP-glucose:glycoprotein glucosyltransferase | JGI | N/A | IEA |
| PTHR11226 | Panther | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE | JGI | N/A | IEA |
| PF01501 | PFAM | Glycosyl transferase family 8 | JGI | N/A | IEA |
| PF06427 | PFAM | UDP-glucose:Glycoprotein Glucosyltransferase | JGI | N/A | IEA |
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Glyma.08g187500 not represented in the dataset |
Glyma.08g187500 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma08g20020 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.08g187500.1 sequence-type=CDS polypeptide=Glyma.08g187500.1.p locus=Glyma.08g187500 ID=Glyma.08g187500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGTGATCTGATTGAGTTGAGTGAGCGGGTGCGTGTGTATGTAATGGGTTATAGATCTGCATGTTTAGTTTTGATCCTTTTCCTCATCCTTGGAATTGGAACTGGAATTGCTTCGTCTGAGACTCCGAGGCCCAAAAATGTCCAAGCTTCCCTTGGCGCTAAGTGGTCCGGTACTCCTCTCCTTCTAGAAGCTGGTGAGTTGTTATCTAAAGAAGACCCTCGCCTTTTCTGGGACTTCATCGACATTTGGCTCAATGCTGCTGCCGACGATCAATCTCATTCCGCAAAAGCTTGCGTCATCGAAATTCTACATCACGCTCGTCCTCTTTTGAGACAACCCTTAGCGTCCTTGTTCGAGTTCTCTCTTATTCTCAGATCAGCTTCCCCTGCTCTCGTGCTTTACCGCCAGCTAGCTCACGATTCTCTTGCGTCTTTCCCTCTCCAAGATGCTCGTGCTCATGCTGAAATCACCAAATTAGATCCCTTGCGTCTTGGGATAAGCCTCAAAAGCCCCGGAGGGAAGTGTTGTTGGGTTCACACTTCCCAAAACTTGTTTTTCGATGTCTCCCAACTGCTCTCATGGCTTCAAACTCAAACTCCGGTGGGTGATTCGTCTCAGAGACCGCAACTGTTTGATTTTGATCATGTTCATTTTGATTCGAGTGCTGGAGGTCCAGTTGCTATACTTTATGGCGCACTTGGGACCGGTTGCTTTAAAGACTTTCATGCTGCACTGGCTGAAGCTGCCAAACAGGGAAAAGTTAATTACGTATTGAGACCGGTGTTGCCAGCTGGATGTGAAACAAATTTTGGCCACTGTGGCTCTGTTGGTGCAAGCGACTCAGTAAACTTGGGTGGTTATGGTGTGGAACTTGCTTTTAAGAACATGGAATATAAGGCCATGGATGACAGTGCAATTAAAAAAGGTGTGACTTTGGAGGATCCCCGCACTGAAGATCTTAGCCAAGAAGTCAGAGGATTCATATTCTCTAAAATTCTGGAGCGTAAACCCGAGTTAGCATCTGAGATCATGACTTTCAGGGATTATCTATTGTCATCAACTGTATCAGATACACTTGATGTTTGGGAATTAAAGGATCTAGGGCATCAAACTGTACAGAGAATAGTCCGTGCCTCTGATCCTCTACAGTCAATGCATGATATCAATCAAAATTTCCCTAACATAGTTTCTTCTTTGTCTCGCATGAAGCTTGATGATTCTGTTCAAGATGAAATAATGGCAAACCAGCGGATGATCCCACCTGGCAAGTCTTTAATGGCTATCAATGGTGCTTTAGTCAATGTGGAAGATATTGACCTTTACCTGTTGATTGACTTGGTTCATCAGGATCTGTTGTTGGCTGATCAGTTCTCAAAATTGAAGATACCTCATAGCACTGTGCGAAAATTGCTGTCAACTTCACCTCCTTCAGAGTCCAGTATGTTTCGCGTTGATTTTCGCACTACTCATGTACATTATCTTAACAACTTGGAAGAAGATGCCAAGTACAAAAGGTGGAGGAGCAATTTAAACGAGATCTTGATGCCGGTCTTCCCTGGTCAGCTACGTCACATCCGTAAAAATCTTTTCCATGCTGTTTTTGTTCTTGACCCAGCAACCATTTGTGGTCTTGAGTCCATTGATACGATCATATCATTGTATGAGAATAATTTTCCTGTGAGATTTGGGATTGTGCTGTATTCTTCAAAATCCATCACGCGGTTAGAGAATCATTCTGCCAAAGAGGATGGAGATAAATTTGAGGAGGATATATCCGATATGATTATACGTCTCTTCAGTTATATCAAGGGAAACCACGGCATTCAATTGGCTTTTGAGTTTTTGAGCAATGTTAACAAATTACGCATTGAATCAGATGATCATATAGATGATGCTCATCTTGAACTGCACCATGTTGAAGGGGCATTTGTGGAAACTATATTGCCAAAGGTAAAATCCCCACCTCAAGAGATACTATTAAAGCTGCAAAAGGAGCCAGAGTTGAAGGAGTTGTCACAAGAAAGCTCCATGCTCGTATTTAAGCTTGGTTTGTCTAAGATTCATTGTTCTCTGTTGATGAACGGACTTGTTATTGATCCAACTGAGGAGGCTTTACTAAATGCCTTGAATGATGAGACTCAAAGAATACAGGAACAAGTATATTTTGGACAAATAAAATCTCACACTGATGTATTAGATAAGTTCCTGTCAGAAGCTGGCATTCAACGTTATAATCCTCGGATTATTTCTGATAATAAACCAAGGTTCATATCTCTGTCTAAGTTTATTTTTGGAGAGGCATCTATACTGAATGATATTGACTACTTGCATTCTCCTGGAACAATGGATGATTTGAAGCCTGTGACACATCTTCTTGCTGTTGACATCACTTCAGGGAGTGGCTTGCATTTGCTTCGCCAAGGCTTAAATTACCTGAGAGAAGGGTCCAAAGAAGCTCGCATAGGTTTTCTGTTTAGTGCCAATCAGAGTACAGATTCATTTAGCCTCCTTTTTGTGAAGGTTTTTGAAATCACTTCATCTTCATATAGCCATAAGAAGAACGTGTTAGACTTCTTGGAACAGTTGTGCTCACTCTATCAGCAGAAATACTTGCTTTCATCAGCTGTGGAAGCTGACAGCATCCAAGCATTTATTGATAAGGTCTGTGAGCTTGCTGAGGCTAATGGGTTACCATCTGATGGCTATAGATCTGCCCTCCCAGAATTTTCTGCGGATGAAGTGAGAAGGCATTTGAGCAAGGTTGAGAACTTTTTTCATAGGGTACTTGGGTCTGAATCTAGTGCTAATGCTGTCTTCACTAATGGAAGGGTAACCTATCCTATTGATGAAAGCACATTTTTGAGCCCTGATCTGCTTCTTCTTGAATCAATAGAGTTTAAGCAGAGGACAAAGCACATTTTGGAAATTATTGAAGAAGTAAAATGGCAGGATGTTGACCCTGACATGCTGACAAGCAAATTCATTAGTGATATTGTCATGACTGTATCATCTTCAATGGCTACGAGAGAGCGAAGTTCTGAAAGTGCTCGTTTTGAGATGTTGAATGATCAACATAGTGCTATTATTCTACATAATGAAAATTCTAGCATTCACATTGATGCTTGTCTCGATCCTTTAAGTCCAACCAGTCAGAAGTTGTCTGGAATTCTTCGAGTTTTGTGGAAATACATTCAACCCAGCATGAGGATTGTTCTGAATCCATTGAGTTCCCTTGCTGATCTTCCTCTGAAGAACTACTACAGATATGTAGTACCATCAATGGATGATTTTAGCAGTGCTGACTCTTCAATCAACGGCCCAAAGGCATTTTTCGCTAACATGCCATTGTCTAAGACTCTCACCATGAATCTTGATGTTCCCGAACCTTGGCTTGTTGAGCCTGTTATTGCTGTTCATGACCTGGATAACATTCTGCTTGAGAACCTTGGTGATACAAGAACATTGCAAGCAATTTTTGAACTTGAAGCTCTTGTCCTAACAGGTCATTGCTCTGAGAAAGATCATGATCCTCCTCGAGGTCTTCAGTTGATTCTTGGAACCAAAACTACACCCCATTTAGTTGATACCATTGTGATGGCTAATCTTGGATATTGGCAAATGAAAGTCTCTCCCGGGGTTTGGTTCTTGCAGCTTGCTCCTGGTAGAAGTTCTGAGCTCTATATTTTAAAGGAAGGCGTTGATGGGATTCAGATTAAACAATCATCAAAATTCATTATTATTAATGATTTACGGGGTAAAGTAGTTCATATGGATGTAGTGAAAAGAAAGGGAAAGGAACATGAGAAATTGCTGATTTCTGATGATGATGCTCCACAAGATAAGAAGAAAGAAAGTAGCTGGAATTCTAACTTACTGAAATGGGCTTCTGGTTTCATTAGTAGTAATGAACAACCTAAAAATGCTGAAACCAATTCACCAGAGAAAGGAAGGGGTGGACGCCATGGAAAAACGATTAATATCTTTTCAATTGCTTCTGGACACTTATATGAACGCTTTCTAAAGATTATGATTCTAAGTGTTCTAAAGAATACACACCGTCCAGTTAAATTCTGGTTCATAAAGAACTACCTGTCTCCTCCTTTTAAGGATCTGATTCCTCACATGGCTCAAGAATATGGTTTTGAATGCGAACTAATCACCTACAAATGGCCTACATGGTTGCATAAGCAGAAAGAAAAGCAGCGAATAATTTGGGCATATAAAATTTTATTCCTTGATGTCATCTTTCCCCTTTCCTTGGAGAAGGTCATTTTTGTAGATGCTGATCAGATTGTCAGGACTGACATGGGAGAACTCTATGACATGGACATAAAAGGAAAACCTCTGGCATATACTCCATTTTGTGACAACAATAGGGAGATGGACGGCTATCGGTTTTGGAGACAAGGTTTCTGGAAGGATCATTTGCGGGGAAAACCATACCATATTAGTGCTTTGTATGTTGTTGACCTGAAGAAGTTCCGAGAGACTGCATCCGGAGATAATCTCAGAGTTTTCTATGAAACCCTTAGCAAGGATCCAAATAGTCTAGCCAACTTGGATCAGGATCTTCCTAATTATGCTCAGCATATTGTTCCCATTTTCTCTCTGCCACAAGAATGGCTTTGGTGTGAGTCATGGTGTGGTAATGCTACAAAATCAAAGGCGAAAACAATTGATCTGTGCAACAATCCCATGACAAAAGAACCCAAACTTCAGGGTGCAAGACGAATAGTATCAGAGTGGCCAGACCTTGATTTGGAGGCAAGTAAATTCACTGCACGGATCTTAGGTGATGATCTAGAACCTTTGCAATCCCCTAACCAATCAAAGGATTTGACTAGCGAAGGTGCATTGAAAGAGGACTTGGAATCCAAGGCAGAGTTGTGA
>Glyma.08g187500.1.p sequence-type=predicted peptide transcript=Glyma.08g187500.1 locus=Glyma.08g187500 ID=Glyma.08g187500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGDLIELSERVRVYVMGYRSACLVLILFLILGIGTGIASSETPRPKNVQASLGAKWSGTPLLLEAGELLSKEDPRLFWDFIDIWLNAAADDQSHSAKACVIEILHHARPLLRQPLASLFEFSLILRSASPALVLYRQLAHDSLASFPLQDARAHAEITKLDPLRLGISLKSPGGKCCWVHTSQNLFFDVSQLLSWLQTQTPVGDSSQRPQLFDFDHVHFDSSAGGPVAILYGALGTGCFKDFHAALAEAAKQGKVNYVLRPVLPAGCETNFGHCGSVGASDSVNLGGYGVELAFKNMEYKAMDDSAIKKGVTLEDPRTEDLSQEVRGFIFSKILERKPELASEIMTFRDYLLSSTVSDTLDVWELKDLGHQTVQRIVRASDPLQSMHDINQNFPNIVSSLSRMKLDDSVQDEIMANQRMIPPGKSLMAINGALVNVEDIDLYLLIDLVHQDLLLADQFSKLKIPHSTVRKLLSTSPPSESSMFRVDFRTTHVHYLNNLEEDAKYKRWRSNLNEILMPVFPGQLRHIRKNLFHAVFVLDPATICGLESIDTIISLYENNFPVRFGIVLYSSKSITRLENHSAKEDGDKFEEDISDMIIRLFSYIKGNHGIQLAFEFLSNVNKLRIESDDHIDDAHLELHHVEGAFVETILPKVKSPPQEILLKLQKEPELKELSQESSMLVFKLGLSKIHCSLLMNGLVIDPTEEALLNALNDETQRIQEQVYFGQIKSHTDVLDKFLSEAGIQRYNPRIISDNKPRFISLSKFIFGEASILNDIDYLHSPGTMDDLKPVTHLLAVDITSGSGLHLLRQGLNYLREGSKEARIGFLFSANQSTDSFSLLFVKVFEITSSSYSHKKNVLDFLEQLCSLYQQKYLLSSAVEADSIQAFIDKVCELAEANGLPSDGYRSALPEFSADEVRRHLSKVENFFHRVLGSESSANAVFTNGRVTYPIDESTFLSPDLLLLESIEFKQRTKHILEIIEEVKWQDVDPDMLTSKFISDIVMTVSSSMATRERSSESARFEMLNDQHSAIILHNENSSIHIDACLDPLSPTSQKLSGILRVLWKYIQPSMRIVLNPLSSLADLPLKNYYRYVVPSMDDFSSADSSINGPKAFFANMPLSKTLTMNLDVPEPWLVEPVIAVHDLDNILLENLGDTRTLQAIFELEALVLTGHCSEKDHDPPRGLQLILGTKTTPHLVDTIVMANLGYWQMKVSPGVWFLQLAPGRSSELYILKEGVDGIQIKQSSKFIIINDLRGKVVHMDVVKRKGKEHEKLLISDDDAPQDKKKESSWNSNLLKWASGFISSNEQPKNAETNSPEKGRGGRHGKTINIFSIASGHLYERFLKIMILSVLKNTHRPVKFWFIKNYLSPPFKDLIPHMAQEYGFECELITYKWPTWLHKQKEKQRIIWAYKILFLDVIFPLSLEKVIFVDADQIVRTDMGELYDMDIKGKPLAYTPFCDNNREMDGYRFWRQGFWKDHLRGKPYHISALYVVDLKKFRETASGDNLRVFYETLSKDPNSLANLDQDLPNYAQHIVPIFSLPQEWLWCESWCGNATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDLDLEASKFTARILGDDLEPLQSPNQSKDLTSEGALKEDLESKAEL*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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