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Report for Sequence Feature Glyma.08g183500

Feature Type:gene_model
Chromosome:Gm08
Start:14724384
stop:14726579
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g183500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13170.1AT senescence-associated gene 29 JGI N/AIEA
GO:0008643GO-bp carbohydrate transport EnsemblGenomesN/AIEA
GO:0034219GO-bp carbohydrate transmembrane transport EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0051119GO-mf sugar transmembrane transporter activity EnsemblGenomesN/AIEA
KOG1623 KOG Multitransmembrane protein JGI N/AIEA
PTHR10791Panther RAG1-ACTIVATING PROTEIN 1 JGI N/AIEA
PF03083PFAM Sugar efflux transporter for intercellular exchange JGI N/AIEA

Proteins Associated with Glyma.08g183500
LocusGene SymbolProtein Name
SWEET24 sugar efflux transporter SWEET24

Expression Patterns of Glyma.08g183500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.08g183500
ParalogEvidenceComments
Glyma.15g049200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g183500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g19580 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g183500
>Glyma.08g183500.2 sequence-type=transcript locus=Glyma.08g183500 ID=Glyma.08g183500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAATGAATGACTTGATATTACGCAGTACATTCCCGTTTGTGTATAAATAGGAGGAGGGAGTTGCTCATCACATCCTCATTCGATCATTCACGAGATTGAGGCGGGGGTTGATTTGGAAGAAACCCAGCTAAGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTCGCTGCCATACTTGTTGTCATTAATGAGTTCTATGCTTTGGTTATACTACGCCTTCCTCAAAATTCATGACGGCGTTGTTCCCCTTATTACGATCAACTCGATCGGATGTGTCATAGAGCTCATCTACATTCTCACCTACATTAAATATGCGCACAAGGATGCAAGGAACTTAACCTATACCCTATTTGCGGCGATGAATATTGGCTTCTTGGCCTTGGTCCTTTCCTCGCGTTTTGCTCTAAATGGTTCCCACCGGGTCAAAGTCATTGGATGGATTTGTGACGCCGTTTCACTCAGTGTCTTTGCATCACCTCTAAGCATTATGGCAAAAGTGATTAGAACAAAGAGTGTACAGTTTATGCCCTTCTATTTGTCATTTTTCCTCACACTGAATGCCATAACGTGGTTTGTATATGGTTTGTCTATGCAAGACAAATGCATTTATATTCCAAATGTGGGAGGGTTTGCACTGGGGCTAGTTCAGATGGTGCTATATGGCATTTACAGgaagggcagtgagagtgagaaggagcaaggtttaggtgaaggagTGATAAACATTGTTGTTGTGAACCCGTTGGGACCTGCTGAAGTCTTCCCAATTGCAGTGGATGATAACAAAGTCAAAGATCTTGTTGTTGTTGATGATGTCACTGTGAGTCAACAAGAGAAAGAGAAAAACGTGGAAGCCAAGGATGATTGCCCAGTGTGATGTTTTTAGTTACGGCCGCCAGGATCATACTCTGCTTTTCCTCTATGTTACGTTATGTGTGTCGATCAGTTACCAATTAATTGTTCTCTATAACATCAAACCTACCATCATCTTAATGCATTACGCCTAGCTACTACTTTACTTCATTCTGCTCCTCCCTTTCCAATCAACATCTTAATACAACACTGCACCTACTTTTATTAGTTAATTAACC

>Glyma.08g183500.3 sequence-type=transcript locus=Glyma.08g183500 ID=Glyma.08g183500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGGGAGTTGCTCATCACATCCTCATTCGATCATTCACGAGATTGAGGCGGGGGTTGATTTGGAAGAAACCCAGCTAAGGTAATTCCTCGCAACCCCTAACTAAACCTTCAAAGGATCATCATGGGCAGTCACAATGCTTTGGCTGCCACTTTCGGAATATTAGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTCGCTGCCATACTTGTTGTCATTAATGAGTTCTATGCTTTGGTTATACTACGCCTTCCTCAAAATTCATGACGGCGTTGTTCCCCTTATTACGATCAACTCGATCGGATGTGTCATAGAGCTCATCTACATTCTCACCTACATTAAATATGCGCACAAGGATGCAAGGAACTTAACCTATACCCTATTTGCGGCGATGAATATTGGCTTCTTGGCCTTGGTCCTTTCCTCGCGTTTTGCTCTAAATGGTTCCCACCGGGTCAAAGTCATTGGATGGATTTGTGACGCCGTTTCACTCAGTGTCTTTGCATCACCTCTAAGCATTATGATTCCAAATGTGGGAGGGTTTGCACTGGGGCTAGTTCAGATGGTGCTATATGGCATTTACAGgaagggcagtgagagtgagaaggagcaaggtttaggtgaaggagTGATAAACATTGTTGTTGTGAACCCGTTGGGACCTGCTGAAGTCTTCCCAATTGCAGTGGATGATAACAAAGTCAAAGATCTTGTTGTTGTTGATGATGTCACTGTGAGTCAACAAGAGAAAGAGAAAAACGTGGAAGCCAAGGATGATTGCCCAGTGTGATGTTTTTAGTTACGGCCGCCAGGATCATACTCTGCTTTTCCTCTATGTTACGTTATGTGTGTCGATCAGTTACCAATTAATTGTTCTCTATAACATCAAACCTACCATCATCTTAATGCATTACGCCTAGCTACTACTTTACTTCATTCTGCTCCTCCCTTTCCAATCAACATCTTAATACAACACTGCACCTACTTTTATTAGTTAATTAACC
Coding sequences of Glyma.08g183500
>Glyma.08g183500.1 sequence-type=CDS polypeptide=Glyma.08g183500.1.p locus=Glyma.08g183500 ID=Glyma.08g183500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGCAGTCACAATGCTTTGGCTGCCACTTTCGGAATATTAGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTCGCTGCCATACTTGTTGTCATTAATGAGTTCTATGCTTTGGTTATACTACGCCTTCCTCAAAATTCATGACGGCGTTGTTCCCCTTATTACGATCAACTCGATCGGATGTGTCATAGAGCTCATCTACATTCTCACCTACATTAAATATGCGCACAAGGATGCAAGGAACTTAACCTATACCCTATTTGCGGCGATGAATATTGGCTTCTTGGCCTTGGTCCTTTCCTCGCGTTTTGCTCTAAATGGTTCCCACCGGGTCAAAGTCATTGGATGGATTTGTGACGCCGTTTCACTCAGTGTCTTTGCATCACCTCTAAGCATTATGGCAAAAGTGATTAGAACAAAGAGTGTACAGTTTATGCCCTTCTATTTGTCATTTTTCCTCACACTGAATGCCATAACGTGGTTTGTATATGGTTTGTCTATGCAAGACAAATGCATTTATATTCCAAATGTGGGAGGGTTTGCACTGGGGCTAGTTCAGATGGTGCTATATGGCATTTACAGGAAGGGCAGTGAGAGTGAGAAGGAGCAAGGTTTAGGTGAAGGAGTGATAAACATTGTTGTTGTGAACCCGTTGGGACCTGCTGAAGTCTTCCCAATTGCAGTGGATGATAACAAAGTCAAAGATCTTGTTGTTGTTGATGATGTCACTGTGAGTCAACAAGAGAAAGAGAAAAACGTGGAAGCCAAGGATGATTGCCCAGTGTGA

>Glyma.08g183500.2 sequence-type=CDS polypeptide=Glyma.08g183500.2.p locus=Glyma.08g183500 ID=Glyma.08g183500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTACTTGGCTCCGGTGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTCGCTGCCATACTTGTTGTCATTAATGAGTTCTATGCTTTGGTTATACTACGCCTTCCTCAAAATTCATGACGGCGTTGTTCCCCTTATTACGATCAACTCGATCGGATGTGTCATAGAGCTCATCTACATTCTCACCTACATTAAATATGCGCACAAGGATGCAAGGAACTTAACCTATACCCTATTTGCGGCGATGAATATTGGCTTCTTGGCCTTGGTCCTTTCCTCGCGTTTTGCTCTAAATGGTTCCCACCGGGTCAAAGTCATTGGATGGATTTGTGACGCCGTTTCACTCAGTGTCTTTGCATCACCTCTAAGCATTATGGCAAAAGTGATTAGAACAAAGAGTGTACAGTTTATGCCCTTCTATTTGTCATTTTTCCTCACACTGAATGCCATAACGTGGTTTGTATATGGTTTGTCTATGCAAGACAAATGCATTTATATTCCAAATGTGGGAGGGTTTGCACTGGGGCTAGTTCAGATGGTGCTATATGGCATTTACAGGAAGGGCAGTGAGAGTGAGAAGGAGCAAGGTTTAGGTGAAGGAGTGATAAACATTGTTGTTGTGAACCCGTTGGGACCTGCTGAAGTCTTCCCAATTGCAGTGGATGATAACAAAGTCAAAGATCTTGTTGTTGTTGATGATGTCACTGTGAGTCAACAAGAGAAAGAGAAAAACGTGGAAGCCAAGGATGATTGCCCAGTGTGA

>Glyma.08g183500.3 sequence-type=CDS polypeptide=Glyma.08g183500.3.p locus=Glyma.08g183500 ID=Glyma.08g183500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGCAGTCACAATGCTTTGGCTGCCACTTTCGGAATATTAGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTCGCTGCCATACTTGTTGTCATTAATGAGTTCTATGCTTTGGTTATACTACGCCTTCCTCAAAATTCATGACGGCGTTGTTCCCCTTATTACGATCAACTCGATCGGATGTGTCATAGAGCTCATCTACATTCTCACCTACATTAAATATGCGCACAAGGATGCAAGGAACTTAACCTATACCCTATTTGCGGCGATGAATATTGGCTTCTTGGCCTTGGTCCTTTCCTCGCGTTTTGCTCTAAATGGTTCCCACCGGGTCAAAGTCATTGGATGGATTTGTGACGCCGTTTCACTCAGTGTCTTTGCATCACCTCTAAGCATTATGATTCCAAATGTGGGAGGGTTTGCACTGGGGCTAGTTCAGATGGTGCTATATGGCATTTACAGGAAGGGCAGTGAGAGTGAGAAGGAGCAAGGTTTAGGTGAAGGAGTGATAAACATTGTTGTTGTGAACCCGTTGGGACCTGCTGAAGTCTTCCCAATTGCAGTGGATGATAACAAAGTCAAAGATCTTGTTGTTGTTGATGATGTCACTGTGAGTCAACAAGAGAAAGAGAAAAACGTGGAAGCCAAGGATGATTGCCCAGTGTGA
Predicted protein sequences of Glyma.08g183500
>Glyma.08g183500.1.p sequence-type=predicted peptide transcript=Glyma.08g183500.1 locus=Glyma.08g183500 ID=Glyma.08g183500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSHNALAATFGILGNIISVMVYLAPVPTFYRIYKKKCTDGFHSLPYLLSLMSSMLWLYYAFLKIHDGVVPLITINSIGCVIELIYILTYIKYAHKDARNLTYTLFAAMNIGFLALVLSSRFALNGSHRVKVIGWICDAVSLSVFASPLSIMAKVIRTKSVQFMPFYLSFFLTLNAITWFVYGLSMQDKCIYIPNVGGFALGLVQMVLYGIYRKGSESEKEQGLGEGVINIVVVNPLGPAEVFPIAVDDNKVKDLVVVDDVTVSQQEKEKNVEAKDDCPV*

>Glyma.08g183500.2.p sequence-type=predicted peptide transcript=Glyma.08g183500.2 locus=Glyma.08g183500 ID=Glyma.08g183500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVYLAPVPTFYRIYKKKCTDGFHSLPYLLSLMSSMLWLYYAFLKIHDGVVPLITINSIGCVIELIYILTYIKYAHKDARNLTYTLFAAMNIGFLALVLSSRFALNGSHRVKVIGWICDAVSLSVFASPLSIMAKVIRTKSVQFMPFYLSFFLTLNAITWFVYGLSMQDKCIYIPNVGGFALGLVQMVLYGIYRKGSESEKEQGLGEGVINIVVVNPLGPAEVFPIAVDDNKVKDLVVVDDVTVSQQEKEKNVEAKDDCPV*

>Glyma.08g183500.3.p sequence-type=predicted peptide transcript=Glyma.08g183500.3 locus=Glyma.08g183500 ID=Glyma.08g183500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSHNALAATFGILGNIISVMVYLAPVPTFYRIYKKKCTDGFHSLPYLLSLMSSMLWLYYAFLKIHDGVVPLITINSIGCVIELIYILTYIKYAHKDARNLTYTLFAAMNIGFLALVLSSRFALNGSHRVKVIGWICDAVSLSVFASPLSIMIPNVGGFALGLVQMVLYGIYRKGSESEKEQGLGEGVINIVVVNPLGPAEVFPIAVDDNKVKDLVVVDDVTVSQQEKEKNVEAKDDCPV*






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