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Report for Sequence Feature Glyma.08g178300

Feature Type:gene_model
Chromosome:Gm08
Start:14287332
stop:14290265
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g178300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G22360.1AT UDP-glucosyl transferase 85A2 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0016758GO-mf transferase activity, transferring hexosyl groups EnsemblGenomesN/AIEA
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI N/AIEA
PTHR11926:SF15Panther JGI N/AIEA
GN7V-51382SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.08g178300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g178300 not represented in the dataset
Glyma.08g178300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g178300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g19016 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g178300
>Glyma.08g178300.1 sequence-type=CDS polypeptide=Glyma.08g178300.1.p locus=Glyma.08g178300 ID=Glyma.08g178300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTGATATTGTAAATTTGTTTGATTGTTGTATAACTATTGTCATTGTGCTCCTTCAACGTCAACAAAATTTTTCTTGGCTTCACCATGGACTTCGTCATATCAGTAACAACAATCTTCTCATCCTTTCAAAGCTGCTTCACCTGAGAGGCTTTCTCATAACCTTTGTCCACACTGAGTACAACCACAAACGCTTCCTCAAATCAAGGAGTTTCAATGCCCTTCATGGCTCACCAGATTTTCGCTTTGAAACCATCCCAGATGGCCTTCCACCACCCTTGGATGCTGATGCTGATGGTGATGTTAGTCAAGACGTACCCTCTCTTTGTGACTCTATCAGAAAAAACTTCCTCCAACCTTTTCGTGACCTTCTTGCTAGACTTAACCACTCTGCCACTGATGGTCTCATTCCCTCAGTTACTTGCTTAGTTTCTGACGGTAGCATGGCCTCCTTTACTGTACGAGCTGCTCAAGAACTTGCAGTCCCTAATGTTATCTGTTGGCCTGCCAGTGCCTGTTCATTCTTGTCTCTCATCAACATTCCCGCTCTCGTTGAAAAAGGTCTCATACCACTCAAAGATGAGAGTTATCTGACAAATGGGTATTTGGACTCAAAAGTGGAGTGGATTCCTGGAATGCAGAACTTCCGGCTGAAGGACATACCTGACTCAAAAGTGGAAGGAAGATCAAAAGTGTCTTGA
Predicted protein sequences of Glyma.08g178300
>Glyma.08g178300.1.p sequence-type=predicted peptide transcript=Glyma.08g178300.1 locus=Glyma.08g178300 ID=Glyma.08g178300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSDIVNLFDCCITIVIVLLQRQQNFSWLHHGLRHISNNNLLILSKLLHLRGFLITFVHTEYNHKRFLKSRSFNALHGSPDFRFETIPDGLPPPLDADADGDVSQDVPSLCDSIRKNFLQPFRDLLARLNHSATDGLIPSVTCLVSDGSMASFTVRAAQELAVPNVICWPASACSFLSLINIPALVEKGLIPLKDESYLTNGYLDSKVEWIPGMQNFRLKDIPDSKVEGRSKVS*






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