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Report for Sequence Feature Glyma.08g176900

Feature Type:gene_model
Chromosome:Gm08
Start:14265595
stop:14267850
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g176900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57150.1AT AtCBF5,AtNAP57,CBF5,NAP57 JGI N/AIEA
5.4.99.25EC tRNA pseudouridine55 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0006396GO-bp RNA processing JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K11131KEGG DNA replication proteins JGI N/AIEA
PTHR13767PantherFam TRNA-PSEUDOURIDINE SYNTHASE JGI N/AIEA
PF01472Pfam PUA domain JGI N/AIEA
PF01509Pfam TruB family pseudouridylate synthase (N terminal domain) JGI N/AIEA
PF08068Pfam DKCLD (NUC011) domain JGI N/AIEA
PF16198Pfam tRNA pseudouridylate synthase B C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.08g176900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g18860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g176900
>Glyma.08g176900.1 sequence-type=CDS polypeptide=Glyma.08g176900.1.p locus=Glyma.08g176900 id=Glyma.08g176900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTGAGTCGGACACGAAGAAGAAGAAGCAGCAGCAGCGCAGCGGCGGAAAGCATGAAGGAGAAGAAGGGTTGATGATCAAGCCCCAGAGCTTCACTCCCCCCATCGACACCTCCCAATGGCCCATTCTCCTCAAAAACTACGAGCGCCTCAACGTCCGCACCGGCCACTACACCCCCATTCCCTCCGGCTACTCCCCCCTGAAGCGCCCCCTCTCCGAGTACCTCAAATACGGCGTCCTCAACCTCGACAAGCCCGCCAACCCTTCCTCCCACGAGGTCGTGGCCTGGATCAAGCGCCTCCTCCGCGTCGAAAAAACCGGCCACTCCGGTACCCTCGACCCCAAGGTCACCGGTAACCTCATCGTCTGCATCGACCGCGCCACCCGCCTCGTCAAGTCCCAGCAGGGAGCCGGTAAAGAATACGTCTGCATCGCCCGCCTCCACTCCGCCGTCCCCGACATCTCCAAGGTCTCCCGCGCCCTCGAAACCCTTACCGGCGCCGTCTTCCAGCGTCCCCCCTTGATCTCCGCCGTCAAGCGCCAGCTCCGGATTCGGACCATCTACGAAAGTAAGCTCCTTGAGTATGACCCTGATAGGCACTTGGTTGTTTTCTGGATTTCCTGTGAGGCTGGTACCTATGTTAGGACTATGTGTGTTCACTTAGGGTTGCTTCTTGGTGTGGGTAGCCACATGCAGGAGCTTAGGAGGGTTAGGTCCGGGATCATGGGGGAGAAGGATAACATGGTCAGCATGCATGATGTCATGGATGCTCAGTGGGTTTATGATAATTATAGGGATGAGACTTATTTGAGGAGGGTTGTTATGCCCTTGGAGATTCTCTTGACTAGCTATAAGAGGCTTGTTGTTAAGGACTCTGCTGTCAATGCTATTTGTTATGGTGCTAAGTTCATGATTCCTGGGTTGCTTAGGTTTGAGAATGATATTGATGTTGGGGAGGAGGTTGTGCTTATGACTACTAAGGGTGAGGCTATTGCTCTTGGGATTGCTGAGATGACTACTGCTGTTATGGCCACTTGTGATCATGGGGTTGTGGCCAAGATCAAGAGGGTGGTCATGGATAGGGATACTTATCCAAGGAAGTGGGGTTTGGGACCCAGGGCTTCCATGAAGAAGAGGCTTATTAGTGAAGGGAAGCTCGATAAGCATGGGAAGCCCAATGAGAAGACTCCACAGGAGTGGCTTAGGAATCTGGTTTTGCCAACTGGTGGGGATAGCATGATTGCTGGCTTGGCTGCTGCGCCAGAACCTGAGGACGACAAGCTTCAGAAGAAGGAGGAGGGAGATGGGGAAGGGAAGAAGAGAAAGAAGCATGAAAGCACAGATAGCCTGGTTGCTGTTCCTGCTAAGAAGGCGAAAGTGGTAGATGAAGTGGAAGAGCTTGAAAAGCTAGAAAAGGTGAAGGTGAAGAAGGTAGATGAAGAGACTGTGGAGGTTGAAGTTGAGAAGAAAGAGAAGAAGAAGAAAAAGAAGAAGGATAAGGAGAACAGCGAGGTGGCCTCTTCGGATGAGGAGAAAACTGAGAAGAAGAAGAACAAGAATAAGATTGAAGATGGTTCGCCGGAGTTAGACAAGTCTGAGAAGAAAAAGAAAAAGAAGAAAGACAAAGCTGCTGCCGCTGCTGCTGAAATTAGCAATGGAAAGGTGGATGACAGTAATGCTGATAAGAGTGAAAAGAAGAAGAATAAGAAAAAGAAAAACAAAGATGCTAAGGAAGAATAG
Predicted protein sequences of Glyma.08g176900
>Glyma.08g176900.1.p sequence-type=predicted peptide transcript=Glyma.08g176900.1 locus=Glyma.08g176900 id=Glyma.08g176900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSESDTKKKKQQQRSGGKHEGEEGLMIKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLSEYLKYGVLNLDKPANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSAVPDISKVSRALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNYRDETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSMIAGLAAAPEPEDDKLQKKEEGDGEGKKRKKHESTDSLVAVPAKKAKVVDEVEELEKLEKVKVKKVDEETVEVEVEKKEKKKKKKKDKENSEVASSDEEKTEKKKNKNKIEDGSPELDKSEKKKKKKKDKAAAAAAEISNGKVDDSNADKSEKKKNKKKKNKDAKEE*






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