SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g173200

Feature Type:gene_model
Chromosome:Gm08
Start:13859691
stop:13869693
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g173200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G16650.1AT JGI N/AIEA
KOG2651 KOG rRNA adenine N-6-methyltransferase JGI N/AIEA
PTHR12496PantherFam CGI-41 METHYLTRANSFERASE JGI N/AIEA
PTHR12496:SF0PantherFam METHYLTRANSFERASE-LIKE PROTEIN 25 JGI N/AIEA
PF13679Pfam Methyltransferase domain JGI N/AIEA

Gene model name correspondences to Glyma.08g173200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g18450 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g173200
>Glyma.08g173200.2 sequence-type=CDS polypeptide=Glyma.08g173200.2.p locus=Glyma.08g173200 id=Glyma.08g173200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAACGAGTTTAGGTATTCATGCAAGAGCGCTCACCAAACTCTTCAATGGATCAACGAAATTATACACTTCCTCACGCCTTACTCTTCCTTAATCAATGCTCACGTCGTTAATTTCTTCAAGGATAGGCTATGGGAGAATGTTGACGCCGAATGGATCGAATGCCTGCGCCGAGAATCTGTTCAAAATCTTCTTCTCATACCTTCTGGTGCAGTACAGGATCAATGGCCAACTTCTTTGAAGGAGTTCATCCTAAAAATAAGGTCTATGGTATTTTGTCAAGAACAAGCAGATATAAACATGGCATTACCTGGCCTGCAGACAATTTCACTTAACACTGTTCTTGCCCAGGGCATGAATGTAAAGAAAAAACATGAAGTTGAAATTCTTTCTGCTGTTACAAATACAGTTGCAAACAGTATCAGAGCTGATGCCATTCTTGATGTTGGTGCTGGTCAGGGTTATCTTGCACAAGTACTTGCCTTTCAATATCAGCATCCTGTAATCGCTATTGATGCATGTTCGCATCATGGGAGGGTTACTGATGCACGGGCAGAACGAATTAAAAAATACTATACATCACAGATGATAAAATCTGAATCAGGCATGCGGAGTTTGAATGTGCCAAAGACAATCACATGTCGTGTATTGTCCATTGATACATTAAAAACCTTGGTTGAAACATCTTTGATTGGAGATGATGTTGAGCAATCCATGTTAAAGGTCGAAAATCAAGAAGATCAAGGGAAACTACATTGGCTCAGTGATGCAAACAAAAAGCCTTCAATTGTTCTTGCTGGGCTTCATGCCTGTGGTGACCTTTCGGTGACTATGCTAAAGACTTTCGTAGAGTGTAAAGATGTTAAAGCTGTTGTTAGTCTAGGTTGCTGTTACAATTTATTATCTGAAGAAATGATTAAGGATGGTGAATCTCAATTTGGATTTCCGATGAGTCACGCTGTAAGATCCATTGGTTTATCACTTGGAAAAAGTGCACGTGATCTTGCTTGCCAGAGTGCTGAGAGATGGAGGAGTCTGGACATGCATGCTGGCATTCACAACTTTGAGTTGCATGCTTTTCGGGCTGCTTTTCAAATGGTTCTTTCTAAATATTATCCGGAAATTGTGATGAGTACTCCTTCAATTGGGCGTAAAGGGAAGGCTCTTCGTCGGCGACATCAGAGGAGATCTGCGGAATCCCAGCTGCATCTTAAAGGAAGTACTTGCCACATGAGACACAATTTCCCTTCTGTAGTTCCTTCAGAGTCAGAAACTGACGGGATTTTGGGCTCCATGTCTGAGATACAGACCTTACCTGGTGAAATTCCTTCTAATGAAAGGGCTGGATGTGAAGTGATTAAATCTGATGACAAACTTTCACATTTTGAGAATTTCTGCCAGTCTGGATTGTCTCATCTTGGAATTAAACATTCACAGGATATAAACCTTCAAGGCATATGGAAGGAAGCAGAACCATTTGCCGACCTTGTAGGACCTTATTGGTCTCTCAGAGCTGCTTTAGGGCCTCTTTTGGAAACTCTTATTATACTTGATAGGTTATTGTTTCTTCAAGAGCAAGGCAGTGCTCTAGAAGCCTGCTTGTTACCGATATTTGATCCAAAAATATCACCAAGAAATGTGGCAATAATTGCAAAAAAGATCGACAAAGATTTAAGATCCTCCTGTTGCTAA
Predicted protein sequences of Glyma.08g173200
>Glyma.08g173200.2.p sequence-type=predicted peptide transcript=Glyma.08g173200.2 locus=Glyma.08g173200 id=Glyma.08g173200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMNEFRYSCKSAHQTLQWINEIIHFLTPYSSLINAHVVNFFKDRLWENVDAEWIECLRRESVQNLLLIPSGAVQDQWPTSLKEFILKIRSMVFCQEQADINMALPGLQTISLNTVLAQGMNVKKKHEVEILSAVTNTVANSIRADAILDVGAGQGYLAQVLAFQYQHPVIAIDACSHHGRVTDARAERIKKYYTSQMIKSESGMRSLNVPKTITCRVLSIDTLKTLVETSLIGDDVEQSMLKVENQEDQGKLHWLSDANKKPSIVLAGLHACGDLSVTMLKTFVECKDVKAVVSLGCCYNLLSEEMIKDGESQFGFPMSHAVRSIGLSLGKSARDLACQSAERWRSLDMHAGIHNFELHAFRAAFQMVLSKYYPEIVMSTPSIGRKGKALRRRHQRRSAESQLHLKGSTCHMRHNFPSVVPSESETDGILGSMSEIQTLPGEIPSNERAGCEVIKSDDKLSHFENFCQSGLSHLGIKHSQDINLQGIWKEAEPFADLVGPYWSLRAALGPLLETLIILDRLLFLQEQGSALEACLLPIFDPKISPRNVAIIAKKIDKDLRSSCC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo