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Report for Sequence Feature Glyma.08g172900

Feature Type:gene_model
Chromosome:Gm08
Start:13827174
stop:13831884
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g172900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G65700.3AT JGI N/AIEA
K12627KEGG Spliceosome JGI N/AIEA
KOG1784 KOG Small Nuclear ribonucleoprotein splicing factor JGI N/AIEA
PTHR15588PantherFam LSM1 JGI N/AIEA
PTHR15588:SF9PantherFam U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 JGI N/AIEA
PF01423Pfam LSM domain JGI N/AIEA

Gene model name correspondences to Glyma.08g172900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g18410 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g172900
>Glyma.08g172900.1 sequence-type=CDS polypeptide=Glyma.08g172900.1.p locus=Glyma.08g172900 id=Glyma.08g172900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCAGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGGGAGTCCTGAAAGGTTTTGACCAGGCAACAAATATTATTCTTGATGAGTCCCATGAACGGGTTTATTCTACAAAGGAAGGTGTGCAACAACTTGTTCTTGGTTTGTACATCATCAGGGGTGACAATATAAGTGTTGTTGGTGAACTGGATGAAGAACTAGATTCTAGTCTGGATTTGTCAAAACTCAGAGCTCATCCTTTGAAACCTGTTATCCATTGA

>Glyma.08g172900.3 sequence-type=CDS polypeptide=Glyma.08g172900.3.p locus=Glyma.08g172900 id=Glyma.08g172900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCTCATTACAAATGATGGACGAAATATAGTGGGAGTCCTGAAAGGTTTTGACCAGGCAACAAATATTATTCTTGATGAGTCCCATGAACGGGTTTATTCTACAAAGGAAGGTGTGCAACAACTTGTTCTTGGTTTGTACATCATCAGGGGTGACAATATAAGTGTTGTTGGTGAACTGGATGAAGAACTAGATTCTAGTCTGGATTTGTCAAAACTCAGAGCTCATCCTTTGAAACCTGTTATCCATTGA
Predicted protein sequences of Glyma.08g172900
>Glyma.08g172900.1.p sequence-type=predicted peptide transcript=Glyma.08g172900.1 locus=Glyma.08g172900 id=Glyma.08g172900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH*

>Glyma.08g172900.3.p sequence-type=predicted peptide transcript=Glyma.08g172900.3 locus=Glyma.08g172900 id=Glyma.08g172900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSAGPGLESLVDLITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH*






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