SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g172200

Feature Type:gene_model
Chromosome:Gm08
Start:13787880
stop:13792418
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g172200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G12930.1AT JGI N/AIEA
PTHR21043PantherFam IOJAP SUPERFAMILY ORTHOLOG JGI N/AIEA
PF02410Pfam Ribosomal silencing factor during starvation JGI N/AIEA

Gene model name correspondences to Glyma.08g172200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g18330 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g172200
>Glyma.08g172200.1 sequence-type=CDS polypeptide=Glyma.08g172200.1.p locus=Glyma.08g172200 id=Glyma.08g172200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTGAAATTACAATAATATCGCGAGACCCGTTTCCCATTTTCATTTCCCTATCTTTTGTTCGTAGATATCTCTTTTTGCCGCGACAAATGCTACCATCATCCACTGTCCTATCTCTCGCCGGAACCCGCGCCGGCGTTCCGGTGAGCTTTTCCGGCGAACTGGGTCACCTCGAAACCAAGTTTTCTTCAAGACCCAGAAAGGTTTTCAGCCGTTCGTGCATAAAGGGGATTCCCTTACAACAAAACACCATCAATGGTTTGAATTCGAAGAACAGAAACTCACTTTCGAGCTTCGCATTCGGTAAAAAAGCCGAAGACAGCTTTTTCTCGGATGTAAATGGAGACACCGATGAAATGTATGATGAATTAATTAATAATTATGGAAAAGTGGTATTTAGTAGAAAAGACAAAAAGCCTGCTAGCGCAGAGATTGATGATGATGCTGAAAGCCTGTCATTTGCTGTGGAATTGGCCACGGTTGCAAGTGAGGTTAAGGCAGGAGATATAAAGGTCTTGTTTGTGAAGCCACTTGTTTACTGGACTCGATTTTTTATCATAGCTACAGCATTTTCTCGTCCCCAAATTGATGCTATCGGGTCCAGAATTAGAGATCGAGCTGAGAAGAAATATGGAAAAATTCCAACCGGAGACACAAAACCCAACTCATGGACTCTGTTGGACTTCGGTGATGTGGTTGTCCACATCTTCCTTCCCTCACAGAGAGCTTTCTACAATTTGGAAGAGTTTTATGGTAATGCCACACAAGTAGAGCTGCCTTTTGAAAATCAACCGCCACCATATCGCATTTGA
Predicted protein sequences of Glyma.08g172200
>Glyma.08g172200.1.p sequence-type=predicted peptide transcript=Glyma.08g172200.1 locus=Glyma.08g172200 id=Glyma.08g172200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTEITIISRDPFPIFISLSFVRRYLFLPRQMLPSSTVLSLAGTRAGVPVSFSGELGHLETKFSSRPRKVFSRSCIKGIPLQQNTINGLNSKNRNSLSSFAFGKKAEDSFFSDVNGDTDEMYDELINNYGKVVFSRKDKKPASAEIDDDAESLSFAVELATVASEVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDRAEKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSQRAFYNLEEFYGNATQVELPFENQPPPYRI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo