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Report for Sequence Feature Glyma.08g162800

Feature Type:gene_model
Chromosome:Gm08
Start:12818667
stop:12828875
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g162800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G10320.1AT JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR12620PantherFam U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT JGI N/AIEA
PTHR12620:SF4PantherFam ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2 JGI N/AIEA
PF00642Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) JGI N/AIEA
PF13893Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.08g162800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g17310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g162800
>Glyma.08g162800.1 sequence-type=CDS polypeptide=Glyma.08g162800.1.p locus=Glyma.08g162800 id=Glyma.08g162800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGAGAAAGATTTCATTGAAGAGGGTAAGAGTATGAGTCGAAAGGAGAAGAGGAAGGCAATGAAGAAAATGAAGCGGAAGCAGGCAAGGAAGGAGGAGGCTGAGAGGGAGCGGCGGGAGGAAGAGGAGCGCCTGAACAACCCCGAGGAGCAGAGGCGGATGCAGTTGCTGGAGCAGCAGGAGGCTGAGAGGATGCAGAGGGATATGATCCTCTTCCGAGAGAGAGAGAAGGCGTGGATGGACACTGTCATCACTCAAAAACAACAACAACAACAGCAGCAGCAACAAGAAGACGAGGATGATGAATACGAATATGTCGAGGAAGAAGGCCCTCCAGAGATCATTTGGCAAGGAAATGAGATCATCTTCAAGAAGAAACAACTCAGAGTTAGGGTTACCGACAGGGACAAACCAAAGCCCAACGAGACTAATCAAAATGACCACCAGCAGGAGGAGGATAATAAACCTACATCCAATCCCTTACCCCCGGAATCATTGACACTTGAGAATGTTGCTCAACAAATACCCAATTTTGGAACTGAACAGGATAAAGCTCATTGCCCTTTTCATCTAAAAACGGGAGCTTGTCGTTTTGGTATACGCTGTAGCAGAGTCCATTTTTACCCTGATAAGTCGTCCACTCTTCTTATCAAAAACATGTACAGTGGTCCTGGCCTTGCTTGCGACCAGGACCAGGATGAGGGCCTTGAGTATACAGATGAAGAGGTTGAACGCTGCTTTGAAGAATTTTATGAGGATGTTCACACAGAGTTCCTGAAGTTTGGGGAAATTGTGAACTTCAAGGTGTGTAAAAATGGTTCATTTCACTTGCGAGGAAATGTCTATGTACAGTATAAATCGCTTGATTCTGCTCTGCTTGCTTATAACACGGTGAATGGTCGCTACTTTGCTGGGAAACAGGTAAGTTGTCAATTTGTTAACTTGACACGATGGAAGGTTGCCATATGTGGCGAGTATATGAAATCAGGTTTCAAGACTTGTTCTCATGGAACAACATGCAATTTTATCCACTGTTTTCGTAATCCCGGCGGAGACTATGAATGGGCCGATTCTGACAAACCTCCCCCGAAATTTTGGGTAAAAAAAATGATCGCTTTATTTGGTTATTCTGATGATTATGAGACTTCAATGGAGCAAGGAAATATGAGTTTGTCAAAAACAGATTCTGACAGAACGTGCCACTCTAGAAGAAGGTCAAGATCTAGGGAGATGGATCAGTTAAATTGCGGTCATTCAGGTAGAAGAAAACAGCGAGATGAAAGAAAGCATAGAACTCCTAATGAGGATTGGAATGGCAGCTTTAAAAGGAAATCGAGAGGCAGAACTCCTGATTCCGGTGCTGTTTCTGACAGGGAATGGTTAGAAAAAGAGGAAAATAGGGAAACACACCATGAATACACTATGAATAGCAGACGCCATGAAGAAGATTCTGATGTGGAATGGGTTACTAGGGACAACGAAAAACAGCATGGTAGAGAAGGAAGAAACTCAAGAAAGCAAAACAGAGATGAGAAAAGGCACCATATTAGCAAAAGCAATTATCAGGGTGGCCGCGATGCTTCTGAATCTGAGAAAGATTTTCTTGGTAGAGGAGAGATGGAAACACAACATGATTATTACTCTAGGAAAAGCTCAAGATACAGAAGATCAGGTCTTGATGATGATGACTATAAATACCATGAGAATGAAAATGACAAAGTTGATGGCGGTTGGTCTCGGAAGGACAGTTACAAGCGAGAAGAGCATCATCACAAAAAGAAGAGATCAAAACATTAG
Predicted protein sequences of Glyma.08g162800
>Glyma.08g162800.1.p sequence-type=predicted peptide transcript=Glyma.08g162800.1 locus=Glyma.08g162800 id=Glyma.08g162800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEKDFIEEGKSMSRKEKRKAMKKMKRKQARKEEAERERREEEERLNNPEEQRRMQLLEQQEAERMQRDMILFREREKAWMDTVITQKQQQQQQQQQEDEDDEYEYVEEEGPPEIIWQGNEIIFKKKQLRVRVTDRDKPKPNETNQNDHQQEEDNKPTSNPLPPESLTLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGLEYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIHCFRNPGGDYEWADSDKPPPKFWVKKMIALFGYSDDYETSMEQGNMSLSKTDSDRTCHSRRRSRSREMDQLNCGHSGRRKQRDERKHRTPNEDWNGSFKRKSRGRTPDSGAVSDREWLEKEENRETHHEYTMNSRRHEEDSDVEWVTRDNEKQHGREGRNSRKQNRDEKRHHISKSNYQGGRDASESEKDFLGRGEMETQHDYYSRKSSRYRRSGLDDDDYKYHENENDKVDGGWSRKDSYKREEHHHKKKRSKH*






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