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Report for Sequence Feature Glyma.08g162000

Feature Type:gene_model
Chromosome:Gm08
Start:12672099
stop:12674964
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g162000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12770.1AT EMB1586,ISE1 JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
KOG0327 KOG Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases JGI N/AIEA
PTHR24031PantherFam RNA HELICASE JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA
PF04851Pfam Type III restriction enzyme, res subunit JGI N/AIEA

Gene model name correspondences to Glyma.08g162000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g17220 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g162000
>Glyma.08g162000.1 sequence-type=CDS polypeptide=Glyma.08g162000.1.p locus=Glyma.08g162000 id=Glyma.08g162000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCAACTTTGATTACATCTAGGTTTCTTTTGCTTGTTGGAGAGTCACTCCACATGAGAAGGGGTTTGGCCACTTCTAGGTCTGTTTTATTGCACACTAGTAGTGTCCAGTGTATGAGCCAGGTGGAACCTCATCATGGTTCCGTCACCCTCTCTAGCATAGGTTTGCAAACTGAAACTGAACCTAGAAACAGAAGCAAAACAAATAAGGTTAAGCCATTGGGTTCACCCTCTGAGAATCTCAAGAGCAAAGGGAAGCCCTTCGGCATTAATGAGAAGAAAAAAACTTTTAGGGTTGTAGAGAAACAGCAAATAGAGTCTGCCCCTTTTGCTGCAAATTCATTTTCAGAACTTGGCCTCCCACTTGTGTTGATTGAGAGGCTAGAGAAGGAGGGTTTCACCGTTCCAACCGAAGTTCAGTCTGCTGCAGTTCCCACCATTCTCAACAACCGTGATGTCATAATTCAGTCTTACACGGGTTCGGGGAAGACGTTGGCTTATCTGCTTCCTATACTCTCGGTTGTTGGGCCACTGAGGGGGGAAATTGGTGAAGGTGACAGTGATGGCGGGGAGTGTGGGAAGAAGTTGGGAATTGAAGCAGTGATTGTTGCTCCTTCTAGGGAGCTTGGAATGCAGATAGTGAGGGAGTTTGAGAAGGTGCTAGGAATGGATAACAAGAGGGCGGTTCAGCAGCTTGTAGGGGGTGCAAACCGAACCAGGCAGGAAGATGCTCTCAAGAAAAATAAACCTGCAATTGTTGTTGGCACGCCTGGTAGGATAGCGGAGCTCAGTGCATCCGGGAAACTTCGAACTCACAGCTGTCGATTTTTGGTATTAGATGAAGTTGACGAACTCTTGTCGTTCAATTTCCGGGAAGACATGCACAGGATATTGGAGCATGTTGGGAGGAGATCAGGTGCAGACCAAAACTCAGATTCTAGAAAGGCCGAGCGACAGTTAATTATGGTTTCTGCAACTGTGCCATTTTCTGTTGTAAGGGCAGCTAGGAGCTGGGGTTGTGACCCACTTCTTGTCCAAGCTAAGAAAGTTGCCCCACTTGGAACTGTCTCTCCCTCTGAGCCTATCAGTTTGTCTCAGTCTTCACCCAGCTCAAGCCCTAGCTTGGCTATGCCATCTCCAGCAGCAGTAGAGAGTCTACCTCCTGCATTGAAACACTATTACTTTGTAACAAGGGTGCAGCACAAAGTTGATGTGTTGAGAAGGTGTATTCATGCACTGGATGCCAAATTTGTGATAGCCTTCATGAACCATACTAAGCAGCTAAAGGATGTTGTCTTCAAGCTGGAGGCCCGTGGGATGAAAGCCATGGAGTTACATGGGGATCTTGGGAAGCTTGCTAGGTCAACAACTCTGAAGAAATTCAAGAATGGTGAGGTGAGAGTTCTGGTGACAAATGAATTATCAGCAAGGGGTTTGGATGTGGCTGAATGTGATCTTGTGGTTAATCTAGACTTGCCGACAGATTCAATTCACTATGCACACCGAGCTGGCCGAACTGGTCGGCTTGGTAGGAATGGTACAGTGGTAACCATATGTGAAGAGTCAGAAGTGTTTGTTGTGAAGAAATTGCAGAAGCAGCTGGGAATACCAATTGCATCCTGTGATTTTGCAGAGGGGAAGCTACTTGTCAGTGAAGAAGAGAAAACAGTAAGCACTTCTGAAAGATGA
Predicted protein sequences of Glyma.08g162000
>Glyma.08g162000.1.p sequence-type=predicted peptide transcript=Glyma.08g162000.1 locus=Glyma.08g162000 id=Glyma.08g162000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPTLITSRFLLLVGESLHMRRGLATSRSVLLHTSSVQCMSQVEPHHGSVTLSSIGLQTETEPRNRSKTNKVKPLGSPSENLKSKGKPFGINEKKKTFRVVEKQQIESAPFAANSFSELGLPLVLIERLEKEGFTVPTEVQSAAVPTILNNRDVIIQSYTGSGKTLAYLLPILSVVGPLRGEIGEGDSDGGECGKKLGIEAVIVAPSRELGMQIVREFEKVLGMDNKRAVQQLVGGANRTRQEDALKKNKPAIVVGTPGRIAELSASGKLRTHSCRFLVLDEVDELLSFNFREDMHRILEHVGRRSGADQNSDSRKAERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKVAPLGTVSPSEPISLSQSSPSSSPSLAMPSPAAVESLPPALKHYYFVTRVQHKVDVLRRCIHALDAKFVIAFMNHTKQLKDVVFKLEARGMKAMELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVVTICEESEVFVVKKLQKQLGIPIASCDFAEGKLLVSEEEKTVSTSER*






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